Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00455 Striga asiatica HOM05D008017 ORTHO05D009829 1.7e-179 632.5 308 100.0
Migut.D00274 Erythranthe guttata HOM05D008017 ORTHO05D009829 9.7e-74 281.2 317 51.1
MSTRG.18221 Avicennia marina HOM05D008017 ORTHO05D009829 9.1e-64 248.1 318 45.9
Oeu022877.1 Olea europaea HOM05D008017 ORTHO05D009829 4.2e-45 186.0 300 39.7
CSS0036401 Camellia sinensis var. sinensis HOM05D008017 ORTHO05D009829 5.4e-32 142.5 274 36.5
Lj2A1176T49 Lonicera japonica HOM05D008017 ORTHO05D009829 8.0e-28 128.6 305 32.8
Cc01_g19690 Coffea canephora HOM05D008017 ORTHO05D009829 4.0e-27 126.3 259 35.1
Dinv32952 Davidia involucrata HOM05D008017 ORTHO05D009829 5.0e-22 109.4 197 37.1
Cpa.g.sc52.7 Carica papaya HOM05D008017 ORTHO05D009829 6.6e-22 109.0 156 37.8
GSVIVG01011109001 Vitis vinifera HOM05D008017 ORTHO05D009829 1.1e-21 108.2 367 29.2
PGSC0003DMG400000958 Solanum tuberosum HOM05D008017 ORTHO05D009829 2.1e-20 104.0 307 30.9
Solyc09g064920.3 Solanum lycopersicum HOM05D008017 ORTHO05D009829 1.1e-19 101.7 301 29.9
Rhsim01G0275500 Rhododendron simsii HOM05D008017 ORTHO05D009829 1.8e-19 100.9 320 29.7
Nitab4.5_0001028g0180 Nicotiana tabacum HOM05D008017 ORTHO05D009829 2.0e-18 97.4 300 28.7
vmacro14930 Vaccinium macrocarpon HOM05D008017 ORTHO05D009829 2.6e-18 97.1 313 29.1
Actinidia21104 Actinidia chinensis HOM05D001048 ORTHO05D009829 9.8e-18 95.1 183 37.2
Lalb_Chr01g0020201 Lupinus albus HOM05D008017 ORTHO05D009829 1.9e-16 90.9 146 38.4
Thecc.01G282500 Theobroma cacao HOM05D008017 ORTHO05D009829 2.4e-16 90.5 173 33.5
Peaxi162Scf00570g00051 Petunia axillaris HOM05D008017 ORTHO05D009829 4.1e-16 89.7 281 28.1
Hma1.2p1_0257F.1_g103690 Hydrangea macrophylla HOM05D008017 ORTHO05D009829 7.0e-16 89.0 145 37.2
QL12p022298 Quercus lobata HOM05D008017 ORTHO05D009829 1.2e-15 88.2 313 25.9
CsaV3_6G037070 Cucumis sativus L. HOM05D008017 ORTHO05D009829 1.6e-15 87.8 271 26.2
Phvul.007G170200 Phaseolus vulgaris HOM05D008017 ORTHO05D009829 3.5e-15 86.7 148 36.5
VMungo0720G1670 Vigna mungo HOM05D008017 ORTHO05D009829 1.0e-14 85.1 192 32.3
Gohir.A11G121700 Gossypium hirsutum HOM05D008017 ORTHO05D009829 1.3e-14 84.7 139 36.7
Gohir.D11G126900 Gossypium hirsutum HOM05D008017 ORTHO05D009829 1.3e-14 84.7 139 36.7
Gorai.007G135600 Gossypium raimondii HOM05D008017 ORTHO05D009829 1.3e-14 84.7 139 36.7
Lj5g0002267 Lotus japonicus HOM05D008017 ORTHO05D009829 1.3e-14 84.7 140 37.1
TAR633G0828 Trochodendron aralioides HOM05D008017 ORTHO05D009829 1.3e-14 84.7 71 53.5
Nn4g26194 Nelumbo nucifera HOM05D001048 ORTHO05D009829 2.3e-14 84.0 210 31.9
Nn4g26195 Nelumbo nucifera HOM05D001048 ORTHO05D009829 2.3e-14 84.0 210 31.9
Prupe.8G243500 Prunus persica HOM05D008017 ORTHO05D009829 3.0e-14 83.6 141 34.0
Ca_09767_v3 Cicer arietinum L. HOM05D008017 ORTHO05D009829 5.1e-14 82.8 140 35.7
Glyma.02G148500 Glycine max HOM05D008017 ORTHO05D009829 5.1e-14 82.8 149 34.9
Psat6g060800 Pisum sativum HOM05D008017 ORTHO05D009829 5.1e-14 82.8 143 35.7
Haze_04733 Corylus avellana HOM05D008017 ORTHO05D009829 1.1e-13 81.6 189 32.8
Lsat_1_v5_gn_9_4200 Lactuca sativa HOM05D055571 ORTHO05D009829 1.9e-13 80.9 256 27.3
TWI59G0151 Tripterygium wilfordii HOM05D008017 ORTHO05D009829 2.5e-13 80.5 137 35.8
Cfa006117 Carpinus fangiana HOM05D008017 ORTHO05D009829 3.3e-13 80.1 191 32.5
arahy.Tifrunner.gnm1.ann1.2M7N28 Arachis hypogaea HOM05D008017 ORTHO05D009829 9.5e-13 78.6 146 34.9
arahy.Tifrunner.gnm1.ann1.D318AT Arachis hypogaea HOM05D008017 ORTHO05D009829 9.5e-13 78.6 146 34.9
CiPaw.08G104100 Carya illinoinensis HOM05D008017 ORTHO05D009829 9.5e-13 78.6 144 35.4
RcHm_v2.0_Chr6g0291401 Rosa chinensis HOM05D008017 ORTHO05D009829 1.2e-12 78.2 284 23.9
ClCG07G000190 Citrullus lanatus HOM05D008017 ORTHO05D009829 3.6e-12 76.6 314 23.9
Nitab4.5_0002386g0070 Nicotiana tabacum HOM05D008017 ORTHO05D009829 3.6e-12 76.6 304 26.6
TPR.G1572 Trifolium pratense HOM05D008017 ORTHO05D009829 6.2e-12 75.9 138 34.1
Medtr1g072530 Medicago truncatula HOM05D008017 ORTHO05D009829 4.0e-11 73.2 349 24.9
arahy.Tifrunner.gnm1.ann1.UF2TDU Arachis hypogaea HOM05D008017 ORTHO05D009829 8.9e-11 72.0 155 34.2
MD03G1267700 Malus domestica HOM05D008017 ORTHO05D009829 2.0e-10 70.9 140 30.0
FvH4_2g23820 Fragaria vesca HOM05D008017 ORTHO05D009829 4.4e-10 69.7 145 29.7
FAN27G1723 Fragaria x ananassa HOM05D008017 ORTHO05D009829 4.4e-10 69.7 145 29.7
FAN20G2511 Fragaria x ananassa HOM05D008017 ORTHO05D009829 5.8e-10 69.3 145 29.7
Aqoxy2G03270 Aquilegia oxysepala HOM05D001048 ORTHO05D009829 7.5e-10 68.9 138 31.9
unitig_22.g5255 Utricularia gibba HOM05D008017 ORTHO05D009829 1.7e-09 67.8 61 57.4
arahy.Tifrunner.gnm1.ann1.3EF69T Arachis hypogaea HOM05D008068 ORTHO05D009829 3.7e-09 66.6 193 32.1
HanXRQChr10g0282841 Helianthus annuus HOM05D008017 ORTHO05D009829 3.7e-09 66.6 140 32.9
Duzib133G1520 Durio zibethinus HOM05D008017 ORTHO05D009829 4.9e-09 66.2 161 27.3
MELO3C014408.2 Cucumis melo HOM05D008017 ORTHO05D009829 1.9e-08 64.3 319 22.3
THA.LOC104801223 Tarenaya hassleriana HOM05D008017 ORTHO05D009829 1.9e-08 64.3 141 30.5
CANSAT25G3665 Cannabis sativa HOM05D008017 ORTHO05D009829 9.2e-08 62.0 157 29.3
FAN24G0680 Fragaria x ananassa HOM05D008017 ORTHO05D009829 2.1e-07 60.8 92 34.8
Sp2g28160 Schrenkiella parvula HOM05D008017 ORTHO05D009829 3.5e-07 60.1 219 24.7
PSO170G5150 Papaver somniferum HOM05D001048 ORTHO05D009829 7.8e-07 58.9 131 29.8
Nn3g19502 Nelumbo nucifera HOM05D001048 ORTHO05D000069 1.0e-06 58.5 135 30.4
Ah.06g192360 Amaranthus hybridus HOM05D001048 ORTHO05D000069 1.3e-06 58.2 136 30.1
Ciclev10023515m.g Citrus clementina HOM05D008017 ORTHO05D009829 1.7e-06 57.8 151 28.5
Duzib168G2379 Durio zibethinus HOM05D001048 ORTHO05D000069 2.3e-06 57.4 173 29.5
Nitab4.5_0004815g0010 Nicotiana tabacum HOM05D001048 ORTHO05D000069 3.0e-06 57.0 219 27.9
Actinidia24882 Actinidia chinensis HOM05D008017 ORTHO05D009829 8.6e-06 55.5 59 45.8
Duzib150G1390 Durio zibethinus HOM05D001048 ORTHO05D000069 8.6e-06 55.5 200 27.0
FAN15G0771 Fragaria x ananassa HOM05D008017 ORTHO05D009829 8.6e-06 55.5 125 28.0


User provided reference genes

Program Settings