Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 1.7e-116 422.5 199 100.0
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 6.0e-77 291.2 199 67.8
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 1.0e-76 290.4 199 66.8
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.3e-76 289.3 203 69.0
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 5.7e-75 284.6 199 66.8
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 9.6e-75 283.9 195 66.7
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 2.8e-74 282.3 194 67.0
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 6.3e-74 281.2 198 65.7
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 1.1e-73 280.4 166 72.9
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 1.1e-73 280.4 194 67.0
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 2.4e-73 279.3 194 66.0
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 2.4e-73 279.3 194 66.0
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 5.3e-73 278.1 185 67.6
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 9.0e-73 277.3 189 68.3
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 1.2e-72 276.9 192 65.6
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.6e-72 275.8 200 66.5
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 4.5e-72 275.0 200 63.5
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 5.9e-72 274.6 199 63.8
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 1.3e-71 273.5 194 66.0
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 1.7e-71 273.1 163 74.2
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 2.2e-71 272.7 164 74.4
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 2.9e-71 272.3 194 67.0
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 2.9e-71 272.3 162 74.1
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 3.8e-71 271.9 222 60.4
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 5.0e-71 271.6 186 67.7
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 6.5e-71 271.2 203 64.0
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 6.5e-71 271.2 200 65.5
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 1.1e-70 270.4 204 64.2
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 1.1e-70 270.4 201 63.7
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 1.4e-70 270.0 194 63.4
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.5e-70 269.2 194 64.9
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 7.2e-70 267.7 181 67.4
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 7.2e-70 267.7 184 66.8
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 9.3e-70 267.3 198 61.6
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 1.2e-69 266.9 194 64.4
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 2.7e-69 265.8 192 65.6
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 4.6e-69 265.0 196 63.3
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 6.1e-69 264.6 189 64.0
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 7.9e-69 264.2 189 64.0
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 7.9e-69 264.2 194 61.3
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.8e-68 263.1 196 63.3
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.8e-68 263.1 196 63.3
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 1.8e-68 263.1 195 62.1
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 3.0e-68 262.3 196 62.8
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 8.7e-68 260.8 196 63.3
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 8.7e-68 260.8 193 62.7
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 8.7e-68 260.8 199 62.3
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 1.5e-67 260.0 196 63.3
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 1.5e-67 260.0 194 61.9
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 1.9e-67 259.6 195 61.5
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 1.9e-67 259.6 192 60.4
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 2.5e-67 259.2 163 74.8
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 2.5e-67 259.2 200 61.5
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 3.3e-67 258.8 186 64.0
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 5.7e-67 258.1 195 63.1
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 9.7e-67 257.3 186 63.4
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 1.3e-66 256.9 193 64.8
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 1.3e-66 256.9 163 69.3
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 1.6e-66 256.5 184 63.6
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 2.2e-66 256.1 193 64.2
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 2.2e-66 256.1 192 60.4
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 2.8e-66 255.8 194 60.8
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 2.8e-66 255.8 163 69.3
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 3.7e-66 255.4 161 71.4
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 4.8e-66 255.0 193 63.7
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 6.3e-66 254.6 193 63.7
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 6.3e-66 254.6 195 62.1
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 8.2e-66 254.2 193 63.7
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 8.2e-66 254.2 195 62.1
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 1.8e-65 253.1 193 62.7
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 1.8e-65 253.1 200 61.5
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 1.8e-65 253.1 188 62.2
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 2.4e-65 252.7 195 62.1
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 4.1e-65 251.9 200 61.5
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 5.3e-65 251.5 185 62.2
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 6.9e-65 251.1 197 61.4
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 2.0e-64 249.6 163 68.7
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 3.4e-64 248.8 191 61.3
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 5.9e-64 248.1 193 61.1
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 5.9e-64 248.1 193 61.1
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 7.7e-64 247.7 195 60.5
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 1.7e-63 246.5 200 61.0
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 5.0e-63 245.0 194 56.7
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 1.4e-62 243.4 188 59.0
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 3.2e-62 242.3 193 60.1
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 1.2e-61 240.4 193 59.1
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 1.2e-61 240.4 197 59.9
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 2.1e-61 239.6 141 73.0
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 3.6e-61 238.8 191 59.7
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 3.6e-61 238.8 191 59.7
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 6.1e-61 238.0 197 59.4
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 1.4e-60 236.9 193 58.0
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 2.3e-60 236.1 245 51.4
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 2.0e-59 233.0 163 65.6
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 2.0e-59 233.0 197 56.3
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 5.7e-59 231.5 201 53.7
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 9.7e-59 230.7 197 55.3
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 1.7e-58 229.9 149 66.4
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 1.4e-57 226.9 201 53.7
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.8e-57 226.5 240 50.0
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 2.4e-57 226.1 162 66.0
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 1.5e-56 223.4 203 53.7
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 2.6e-56 222.6 162 65.4
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 2.9e-55 219.2 240 48.3
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 1.6e-53 213.4 147 66.7
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 3.6e-53 212.2 153 62.7
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 1.1e-51 207.2 159 61.0
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 4.4e-51 205.3 159 61.6
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 7.4e-51 204.5 148 62.8
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.3e-50 203.8 152 63.2
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 2.6e-48 196.1 167 58.1
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 2.2e-47 193.0 149 59.7
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 4.2e-46 188.7 149 56.4
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 4.2e-46 188.7 149 56.4
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 2.8e-42 176.0 137 59.9
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 1.1e-41 174.1 143 58.7
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 1.1e-41 174.1 137 59.1
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 5.3e-41 171.8 138 56.5
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 6.1e-37 158.3 111 60.4
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 1.8e-36 156.8 105 62.9
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 3.0e-36 156.0 125 53.6
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 5.2e-36 155.2 112 62.5
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 8.8e-36 154.5 149 49.7
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 4.4e-35 152.1 132 54.5
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 6.3e-34 148.3 225 38.7
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.2e-32 144.1 92 71.7
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 4.5e-32 142.1 106 59.4
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 3.2e-30 136.0 139 48.2
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 5.5e-30 135.2 122 54.1
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 3.6e-29 132.5 88 64.8
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 5.2e-28 128.6 85 65.9
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 3.6e-21 105.9 82 59.8
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 8.3e-18 94.7 97 51.5
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 1.8e-17 93.6 194 33.0
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 4.1e-17 92.4 160 35.6
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 3.7e-10 69.3 45 73.3


User provided reference genes

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