Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00418 Striga asiatica HOM05D000040 ORTHO05D402065 4.3e-115 417.9 202 100.0
Migut.D00175 Erythranthe guttata HOM05D000040 ORTHO05D002507 6.6e-31 138.3 278 36.3
Migut.B00541 Erythranthe guttata HOM05D000040 ORTHO05D002507 1.6e-16 90.5 270 28.1
Migut.D00156 Erythranthe guttata HOM05D000040 ORTHO05D002507 1.3e-15 87.4 267 29.2
Actinidia00692 Actinidia chinensis HOM05D000143 ORTHO05D002507 1.8e-15 87.0 264 30.3
SGA_v2.0_scaffold1G00420 Striga asiatica HOM05D000040 ORTHO05D002507 2.3e-15 86.7 258 28.7
Haze_08046 Corylus avellana HOM05D000040 ORTHO05D002507 1.9e-14 83.6 267 26.6
Haze_08056 Corylus avellana HOM05D000040 ORTHO05D002507 1.9e-14 83.6 267 26.6
Haze_04830 Corylus avellana HOM05D000040 ORTHO05D002507 2.5e-14 83.2 271 26.9
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 4.8e-13 79.0 270 27.4
Sabra01G0015100 Salix brachista HOM05D000040 ORTHO05D002507 1.4e-12 77.4 269 25.3
Migut.D00155 Erythranthe guttata HOM05D000040 ORTHO05D002507 1.8e-12 77.0 269 29.7
Prupe.3G234600 Prunus persica HOM05D000040 ORTHO05D002507 1.8e-12 77.0 120 35.8
Migut.D00157 Erythranthe guttata HOM05D000040 ORTHO05D002507 6.9e-12 75.1 256 26.6
Haze_04829 Corylus avellana HOM05D000040 ORTHO05D002507 9.0e-12 74.7 141 34.0
Cfa006019 Carpinus fangiana HOM05D000040 ORTHO05D002507 3.4e-11 72.8 199 28.1
Migut.D00158 Erythranthe guttata HOM05D000040 ORTHO05D002507 1.7e-10 70.5 167 28.7
Potri.001G020400 Populus trichocarpa HOM05D000040 ORTHO05D002507 2.2e-10 70.1 271 24.4
SGA_v2.0_scaffold1G00419 Striga asiatica HOM05D000040 ORTHO05D002507 2.2e-10 70.1 269 24.9
MD05G1305400 Malus domestica HOM05D000040 ORTHO05D002507 1.4e-09 67.4 264 24.6
MD11G1298600 Malus domestica HOM05D000040 ORTHO05D002507 1.4e-09 67.4 259 26.6
TAR369G1147 Trochodendron aralioides HOM05D000040 ORTHO05D002507 2.1e-08 63.5 179 25.1
SGA_v2.0_scaffold254G45207 Striga asiatica HOM05D000040 ORTHO05D002507 1.3e-07 60.8 256 24.2
Duzib264G0456 Durio zibethinus HOM05D000040 ORTHO05D000267 1.8e-07 60.5 163 30.7
FAN09G2355 Fragaria x ananassa HOM05D000040 ORTHO05D002507 2.3e-07 60.1 124 34.7
PGSC0003DMG400023324 Solanum tuberosum HOM05D000040 ORTHO05D000267 5.1e-07 58.9 161 26.1
FAN09G3269 Fragaria x ananassa HOM05D000040 ORTHO05D002507 6.7e-07 58.5 141 29.8
PSO767G0003 Papaver somniferum HOM05D000040 ORTHO05D002507 8.7e-07 58.2 188 24.5
Hma1.2p1_0930F.1_g238030 Hydrangea macrophylla HOM05D000040 ORTHO05D000267 1.1e-06 57.8 161 28.6
SGA_v2.0_scaffold254G45209 Striga asiatica HOM05D000040 ORTHO05D002507 1.5e-06 57.4 250 23.6
FAN09G1688 Fragaria x ananassa HOM05D000040 ORTHO05D002507 1.9e-06 57.0 168 26.2
TAR369G0140 Trochodendron aralioides HOM05D000040 ORTHO05D002507 1.9e-06 57.0 139 26.6
Cc07_g19200 Coffea canephora HOM05D000040 ORTHO05D000267 2.5e-06 56.6 163 28.2
THA.LOC104819569 Tarenaya hassleriana HOM05D000040 ORTHO05D000267 2.5e-06 56.6 167 28.1
FAN09G0755 Fragaria x ananassa HOM05D000040 ORTHO05D002507 3.3e-06 56.2 168 26.2
PSO478G3842 Papaver somniferum HOM05D000040 ORTHO05D002507 3.3e-06 56.2 55 38.2
vmacro23031 Vaccinium macrocarpon HOM05D000040 ORTHO05D000267 3.3e-06 56.2 122 30.3
CAN.G1156.41 Capsicum annuum HOM05D000040 ORTHO05D000267 4.3e-06 55.8 161 24.8
Manes.13G078400 Manihot esculenta HOM05D000040 ORTHO05D000267 4.3e-06 55.8 160 27.5
Prupe.8G253800 Prunus persica HOM05D000040 ORTHO05D002507 4.3e-06 55.8 167 26.3
Migut.D00715 Erythranthe guttata HOM05D000040 ORTHO05D002507 5.7e-06 55.5 168 24.4
Migut.K01202 Erythranthe guttata HOM05D000040 ORTHO05D000267 5.7e-06 55.5 160 28.1
PSO339G6518 Papaver somniferum HOM05D000040 ORTHO05D002507 5.7e-06 55.5 187 23.5
Prupe.8G253600 Prunus persica HOM05D000040 ORTHO05D002507 5.7e-06 55.5 167 26.9
Solyc05g056450.3 Solanum lycopersicum HOM05D000040 ORTHO05D000267 5.7e-06 55.5 161 24.8
CAN.G1609.9 Capsicum annuum HOM05D000040 ORTHO05D000759 7.4e-06 55.1 127 29.9
Ciclev10033845m.g Citrus clementina HOM05D000040 ORTHO05D004411 9.7e-06 54.7 147 25.9
PSO782G1547 Papaver somniferum HOM05D000040 ORTHO05D002507 9.7e-06 54.7 53 37.7
QL09p044227 Quercus lobata HOM05D000040 ORTHO05D004411 9.7e-06 54.7 147 29.9
Thecc.01G143700 Theobroma cacao HOM05D000040 ORTHO05D000267 9.7e-06 54.7 163 28.2


User provided reference genes

Program Settings