Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 2.3e-137 492.3 254 100.0
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 2.7e-98 362.5 251 77.7
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 2.8e-79 299.3 214 75.7
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 1.5e-72 276.9 281 61.6
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 3.7e-71 272.3 269 62.8
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 9.1e-70 267.7 287 59.6
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 1.1e-67 260.8 270 61.9
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 3.2e-67 259.2 283 59.4
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.0e-65 252.7 276 60.5
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 6.8e-65 251.5 271 59.8
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 2.6e-64 249.6 278 60.1
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 7.5e-64 248.1 269 58.7
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 1.7e-63 246.9 280 58.9
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 3.7e-63 245.7 279 58.8
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 8.3e-63 244.6 276 58.0
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 8.3e-63 244.6 280 59.6
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 1.4e-62 243.8 278 59.7
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 4.1e-62 242.3 267 59.2
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 4.1e-62 242.3 270 60.7
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 1.2e-61 240.7 292 54.5
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.6e-61 240.4 278 59.0
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.6e-61 240.4 279 57.7
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 2.7e-61 239.6 279 58.8
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 4.5e-61 238.8 285 58.2
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.0e-60 237.7 264 61.0
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 1.3e-60 237.3 283 57.6
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 1.1e-59 234.2 283 56.2
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 1.2e-58 230.7 278 55.8
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 1.6e-58 230.3 278 55.8
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 3.6e-58 229.2 281 55.9
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 3.6e-58 229.2 263 58.6
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 8.0e-58 228.0 302 53.0
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 8.9e-57 224.6 276 55.1
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 1.2e-56 224.2 275 54.9
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 5.7e-56 221.9 277 56.3
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 9.8e-56 221.1 277 56.3
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 1.3e-55 220.7 285 51.2
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 2.9e-55 219.5 270 56.7
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 2.9e-55 219.5 260 56.9
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 4.9e-55 218.8 277 56.3
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 4.9e-55 218.8 272 56.2
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 6.4e-55 218.4 278 55.4
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 8.3e-55 218.0 277 56.0
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 7.0e-54 214.9 284 54.6
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.2e-53 214.2 277 54.5
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 1.2e-53 214.2 271 53.9
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.0e-53 213.4 271 54.6
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 2.0e-53 213.4 271 53.9
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 2.7e-53 213.0 271 53.5
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 5.9e-53 211.8 286 52.8
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.3e-52 210.7 283 51.6
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 5.0e-52 208.8 279 53.8
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 8.6e-52 208.0 258 53.9
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 2.5e-51 206.5 275 53.8
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 4.3e-51 205.7 278 54.7
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 7.3e-51 204.9 278 52.9
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 3.6e-50 202.6 200 67.0
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 3.6e-50 202.6 281 54.8
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 2.3e-49 199.9 267 53.2
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 3.1e-49 199.5 263 54.8
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 2.6e-48 196.4 280 53.6
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 4.4e-48 195.7 303 48.8
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 9.8e-48 194.5 287 50.9
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 1.7e-47 193.7 259 53.3
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.2e-47 193.4 265 52.8
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 6.4e-47 191.8 296 49.3
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 2.4e-46 189.9 265 54.0
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 1.6e-45 187.2 264 54.2
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 3.5e-45 186.0 258 51.6
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 3.5e-45 186.0 261 51.0
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 6.0e-45 185.3 277 52.0
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 7.8e-45 184.9 260 50.0
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 1.7e-44 183.7 261 50.6
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 3.9e-44 182.6 167 68.9
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 5.0e-44 182.2 266 50.8
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 8.6e-44 181.4 261 50.2
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 1.1e-43 181.0 265 51.7
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.5e-43 180.6 275 49.8
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 1.9e-43 180.3 259 51.4
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 1.9e-43 180.3 247 52.2
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 4.3e-43 179.1 287 47.0
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 3.6e-42 176.0 300 48.0
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 4.7e-42 175.6 243 53.5
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.4e-41 174.1 266 49.6
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 2.3e-41 173.3 264 50.0
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 3.1e-41 172.9 258 49.2
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 4.0e-41 172.6 239 54.4
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 5.2e-41 172.2 171 66.1
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 8.9e-41 171.4 222 55.9
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 2.6e-40 169.9 281 48.8
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 3.4e-40 169.5 257 51.4
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 1.3e-39 167.5 258 47.7
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 8.3e-39 164.9 265 47.2
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 5.4e-38 162.2 276 47.5
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.1e-35 154.5 220 51.4
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 4.3e-35 152.5 168 62.5
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 3.1e-33 146.4 217 52.5
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 6.8e-33 145.2 260 47.3
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 3.8e-31 139.4 239 45.2
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 6.0e-29 132.1 240 44.2
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 6.0e-29 132.1 174 52.3
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 1.1e-27 127.9 274 40.1
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 5.6e-27 125.6 247 42.9
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 8.4e-23 111.7 234 41.9
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 3.2e-22 109.8 238 43.7
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 4.2e-22 109.4 175 48.6
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 9.3e-22 108.2 344 33.1
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 4.6e-21 105.9 109 70.6
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 1.1e-19 101.3 93 62.4
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.9e-19 100.5 220 41.4
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 2.4e-17 93.6 229 39.7
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 4.6e-13 79.3 87 54.0
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 7.9e-13 78.6 196 39.8
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 2.8e-10 70.1 77 54.5
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 3.4e-08 63.2 69 58.0
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 3.4e-08 63.2 80 51.2
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 3.4e-08 63.2 80 51.2
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 7.6e-08 62.0 91 47.3
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 1.3e-07 61.2 39 76.9
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 1.3e-07 61.2 39 76.9
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 4.9e-07 59.3 39 74.4
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 8.4e-07 58.5 41 70.7
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 1.4e-06 57.8 80 50.0
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 2.4e-06 57.0 63 55.6
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 3.2e-06 56.6 41 68.3


User provided reference genes

Program Settings