Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00362 Striga asiatica HOM05D005743 ORTHO05D007031 6.2e-299 1030.0 517 100.0
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 7.3e-199 697.6 515 71.1
SalBow3G4402 Salvia bowleyana HOM05D005743 ORTHO05D007031 2.1e-190 669.5 516 69.8
SalBow2G1764 Salvia bowleyana HOM05D005743 ORTHO05D007031 6.0e-185 651.4 510 68.2
Migut.O00421 Erythranthe guttata HOM05D005743 ORTHO05D007031 1.1e-183 647.1 489 69.3
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 1.1e-183 647.1 516 67.1
Ciclev10019600m.g Citrus clementina HOM05D005743 ORTHO05D007031 7.3e-183 644.4 510 67.8
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 2.8e-182 642.5 502 67.7
Nitab4.5_0005805g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 4.7e-182 641.7 495 68.5
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 6.2e-182 641.3 527 65.8
Migut.N01507 Erythranthe guttata HOM05D005743 ORTHO05D007031 8.1e-182 641.0 489 68.3
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 1.4e-181 640.2 496 68.1
Potri.014G128600 Populus trichocarpa HOM05D005743 ORTHO05D007031 1.8e-181 639.8 505 66.9
Manes.01G219600 Manihot esculenta HOM05D005743 ORTHO05D007031 4.0e-181 638.6 508 66.1
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 1.5e-180 636.7 498 68.9
Nitab4.5_0002470g0070 Nicotiana tabacum HOM05D005743 ORTHO05D007031 3.4e-180 635.6 497 68.0
Ca_10331_v3 Cicer arietinum L. HOM05D005743 ORTHO05D007031 5.8e-180 634.8 502 66.9
COL.COLO4_23341 Corchorus olitorius HOM05D005743 ORTHO05D007031 5.8e-180 634.8 499 68.5
Dinv19686 Davidia involucrata HOM05D005743 ORTHO05D007031 2.2e-179 632.9 510 66.7
Prupe.8G261900 Prunus persica HOM05D005743 ORTHO05D007031 2.9e-179 632.5 511 66.3
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 3.8e-179 632.1 508 66.9
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 1.4e-178 630.2 503 66.4
Aqoxy2G02938 Aquilegia oxysepala HOM05D005743 ORTHO05D007031 3.2e-178 629.0 525 62.5
Lj5g0015401 Lotus japonicus HOM05D005743 ORTHO05D007031 1.2e-177 627.1 501 66.9
VMungo0720G3165 Vigna mungo HOM05D005743 ORTHO05D007031 1.2e-177 627.1 506 65.4
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 1.6e-177 626.7 507 65.9
Rhsim01G0285500 Rhododendron simsii HOM05D005743 ORTHO05D007031 2.1e-177 626.3 522 65.3
TWI59G0198 Tripterygium wilfordii HOM05D005743 ORTHO05D007031 6.0e-177 624.8 508 65.0
CsaV3_4G000840 Cucumis sativus L. HOM05D005743 ORTHO05D007031 1.3e-176 623.6 497 67.4
Peaxi162Scf00399g00716 Petunia axillaris HOM05D005743 ORTHO05D007031 1.7e-176 623.2 516 65.5
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea HOM05D005743 ORTHO05D007031 2.3e-176 622.9 510 65.9
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 2.3e-176 622.9 512 66.0
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 2.3e-176 622.9 498 67.7
Cfa005908 Carpinus fangiana HOM05D005743 ORTHO05D007031 5.1e-176 621.7 498 67.1
MD03G1288600 Malus domestica HOM05D005743 ORTHO05D007031 5.1e-176 621.7 510 65.9
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea HOM05D005743 ORTHO05D007031 8.6e-176 620.9 510 65.9
TAR362G0334 Trochodendron aralioides HOM05D005743 ORTHO05D007031 2.5e-175 619.4 496 66.9
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 3.3e-175 619.0 508 65.6
Medtr1g088430 Medicago truncatula HOM05D005743 ORTHO05D007031 4.3e-175 618.6 497 65.8
CSS0024650 Camellia sinensis var. sinensis HOM05D005743 ORTHO05D007031 5.6e-175 618.2 501 65.7
MELO3C017953.2 Cucumis melo HOM05D005743 ORTHO05D007031 5.6e-175 618.2 497 67.0
MBI18_g06031_MAGBIO Magnolia biondii HOM05D005743 ORTHO05D007031 7.3e-175 617.8 509 64.6
Sed0000130 Sechium edule HOM05D005743 ORTHO05D007031 7.3e-175 617.8 498 66.5
Lj2A1195G24 Lonicera japonica HOM05D005743 ORTHO05D007031 9.6e-175 617.5 512 64.8
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 1.6e-174 616.7 514 64.8
Cc01_g20880 Coffea canephora HOM05D005743 ORTHO05D007031 2.8e-174 615.9 509 65.0
QL12p028420 Quercus lobata HOM05D005743 ORTHO05D007031 2.8e-174 615.9 509 65.4
Sabra14G0095500 Salix brachista HOM05D005743 ORTHO05D007031 4.0e-173 612.1 538 62.5
Phvul.007G147000 Phaseolus vulgaris HOM05D005743 ORTHO05D007031 5.2e-173 611.7 506 64.2
Duzib138G1616 Durio zibethinus HOM05D005743 ORTHO05D007031 6.9e-173 611.3 496 66.9
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 6.9e-173 611.3 515 64.5
SGA_v2.0_scaffold198G41143 Striga asiatica HOM05D005743 ORTHO05D007031 5.8e-172 608.2 518 63.3
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 7.6e-172 607.8 522 63.2
Cpa.g.sc9.258 Carica papaya HOM05D005743 ORTHO05D007031 1.7e-171 606.7 491 66.4
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 2.2e-171 606.3 492 64.6
GSVIVG01028023001 Vitis vinifera HOM05D005743 ORTHO05D007031 2.2e-171 606.3 503 64.6
CAN.G1280.3 Capsicum annuum HOM05D005743 ORTHO05D007031 2.9e-171 605.9 510 65.5
THA.LOC104827666 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 2.9e-171 605.9 493 65.1
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 3.8e-171 605.5 522 61.7
BraA05t19031Z Brassica rapa HOM05D005743 ORTHO05D007031 4.9e-171 605.1 521 61.8
AT2G47600 Arabidopsis thaliana HOM05D005743 ORTHO05D007031 8.4e-171 604.4 524 62.8
CARHR143000 Cardamine hirsuta HOM05D005743 ORTHO05D007031 8.4e-171 604.4 519 62.6
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.4e-170 603.6 498 65.3
AL4G47180 Arabidopsis lyrata HOM05D005743 ORTHO05D007031 2.4e-170 602.8 524 62.4
C04p00250 Brassica napus HOM05D005743 ORTHO05D007031 2.4e-170 602.8 521 61.6
BolC4t21668H Brassica oleracea HOM05D005743 ORTHO05D007031 2.4e-170 602.8 521 61.6
A05p00330 Brassica napus HOM05D005743 ORTHO05D007031 1.6e-169 600.1 521 61.4
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 2.7e-169 599.4 520 62.5
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 2.7e-169 599.4 498 63.9
ClCG10G010970 Citrullus lanatus HOM05D005743 ORTHO05D007031 3.0e-168 595.9 575 59.3
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 5.1e-168 595.1 572 57.7
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 2.5e-167 592.8 489 65.0
BcaB02g08759 Brassica carinata HOM05D005743 ORTHO05D007031 7.3e-167 591.3 486 64.2
Eucgr.K03487 Eucalyptus grandis HOM05D005743 ORTHO05D007031 4.0e-165 585.5 505 62.8
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 5.3e-165 585.1 509 62.3
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 6.9e-165 584.7 503 61.8
AUR62025577 Chenopodium quinoa HOM05D005743 ORTHO05D007031 9.0e-165 584.3 501 63.9
PSO407G0387 Papaver somniferum HOM05D005743 ORTHO05D007031 1.2e-164 583.9 514 61.9
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 2.9e-163 579.3 512 62.3
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 8.4e-163 577.8 531 60.6
Sc05g0003820 Simmondsia chinensis HOM05D005743 ORTHO05D007031 8.4e-163 577.8 498 63.9
Lsat_1_v5_gn_5_191280 Lactuca sativa HOM05D005743 ORTHO05D007031 2.7e-161 572.8 503 61.8
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 3.0e-160 569.3 482 63.7
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 1.6e-158 563.5 471 65.4
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 2.8e-158 562.8 507 60.6
Os11g0660000 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 2.4e-157 559.7 498 61.0
CDE02G2026 Ceratophyllum demersum HOM05D005743 ORTHO05D007031 1.2e-156 557.4 493 60.9
HPP92_016082 Vanilla planifolia HOM05D005743 ORTHO05D007031 1.1e-154 550.8 501 59.7
Eucgr.K03488 Eucalyptus grandis HOM05D005743 ORTHO05D007031 3.5e-153 545.8 442 65.4
Ah.08g213420 Amaranthus hybridus HOM05D005743 ORTHO05D007031 3.0e-152 542.7 504 59.5
ECA248G2514 Erigeron canadensis HOM05D005743 ORTHO05D007031 3.0e-152 542.7 475 62.7
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 1.5e-151 540.4 496 61.1
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 1.4e-149 533.9 473 61.9
Haze_04942 Corylus avellana HOM05D005743 ORTHO05D007031 4.9e-147 525.4 544 55.9
RcHm_v2.0_Chr6g0294081 Rosa chinensis HOM05D005743 ORTHO05D007031 3.2e-146 522.7 496 58.9
Lalb_Chr06g0166491 Lupinus albus HOM05D005743 ORTHO05D007031 1.8e-141 506.9 465 59.1
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 1.8e-125 453.8 386 62.7
Nn4g25787 Nelumbo nucifera HOM05D005743 ORTHO05D007031 1.4e-122 444.1 378 63.0
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 3.9e-120 436.0 394 62.4
Nitab4.5_0001879g0130 Nicotiana tabacum HOM05D005743 ORTHO05D007031 2.0e-111 407.1 536 47.6
Gohir.A11G114301 Gossypium hirsutum HOM05D005743 ORTHO05D007031 5.9e-92 342.4 281 63.7
Peaxi162Scf00001g04234 Petunia axillaris HOM05D005743 ORTHO05D007031 1.0e-91 341.7 386 54.4
vmacro15016 Vaccinium macrocarpon HOM05D005743 ORTHO05D007031 6.6e-91 339.0 332 58.4
ATR0706G014 Amborella trichopoda HOM05D005743 ORTHO05D007031 4.0e-88 329.7 266 65.8
Zm00001eb165450 Zea mays HOM05D005743 ORTHO05D007031 8.9e-88 328.6 317 57.1
CiPaw.08G094900 Carya illinoinensis HOM05D005743 ORTHO05D007031 6.0e-84 315.8 295 59.7
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis HOM05D005743 ORTHO05D007031 1.7e-83 314.3 523 39.6
Hund18173 Selenicereus undatus HOM05D005743 ORTHO05D007031 1.1e-82 311.6 263 63.9
Pp3c1_39250 Physcomitrium patens HOM05D005743 ORTHO05D007031 7.5e-79 298.9 519 37.6
Mapoly0134s0038 Marchantia polymorpha HOM05D005743 ORTHO05D007031 6.4e-78 295.8 493 39.4
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis HOM05D005743 ORTHO05D007031 3.5e-76 290.0 529 35.0
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 1.5e-71 274.6 519 35.5
THA.LOC104798829 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 6.4e-62 242.7 156 76.3
SMO351G0556 Selaginella moellendorffii HOM05D005743 ORTHO05D007031 1.3e-59 235.0 415 36.9
Nitab4.5_0002433g0030 Nicotiana tabacum HOM05D005743 ORTHO05D007031 5.1e-59 233.0 260 55.4
Actinidia26720 Actinidia chinensis HOM05D005743 ORTHO05D007031 5.3e-56 223.0 272 50.0
Os02g0644900 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 3.4e-47 193.7 221 48.9
CBR_g22437 Chara braunii HOM05D005743 ORTHO05D007031 2.4e-45 187.6 595 27.6
Rhsim05G0173900 Rhododendron simsii HOM05D005743 ORTHO05D007031 1.8e-40 171.4 133 66.9
EL10Ac3g06395 Beta vulgaris HOM05D005743 ORTHO05D007031 3.9e-35 153.7 109 73.4
Zm00001eb407450 Zea mays HOM05D005743 ORTHO05D007031 5.6e-34 149.8 103 69.9
SEGI_24798 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 1.2e-31 142.1 110 70.0
Actinidia21045 Actinidia chinensis HOM05D005743 ORTHO05D007031 1.7e-30 138.3 100 69.0
SEGI_13510 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 4.6e-28 130.2 115 59.1
PRCOL_00004461 Prasinoderma coloniale HOM05D005743 ORTHO05D007031 1.3e-27 128.6 675 24.6
Actinidia21044 Actinidia chinensis HOM05D005743 ORTHO05D007031 6.9e-24 116.3 103 55.3
Nitab4.5_0002433g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.5e-18 98.6 94 58.5
SEGI_31813 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 2.5e-18 97.8 91 56.0
Cre11.g479600 Chlamydomonas reinhardtii HOM05D005743 ORTHO05D007031 1.4e-16 92.0 181 33.1
Glyma.02G017550 Glycine max HOM05D005743 ORTHO05D007031 2.0e-15 88.2 64 71.9
SEGI_40223 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 4.5e-15 87.0 90 52.2
ATR0706G260 Amborella trichopoda HOM05D005743 ORTHO05D007031 2.3e-11 74.7 52 82.7
Medtr7g112660 Medicago truncatula HOM05D005743 ORTHO05D007031 9.1e-08 62.8 40 77.5


User provided reference genes

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