Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 7.8e-71 270.4 140 100.0
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 1.1e-53 213.4 142 80.3
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 3.3e-53 211.8 140 80.0
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 7.3e-53 210.7 142 81.0
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 2.8e-52 208.8 121 88.4
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 6.2e-52 207.6 129 82.9
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 1.4e-51 206.5 140 79.3
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.8e-51 206.1 142 78.9
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.8e-51 206.1 142 78.9
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 2.3e-51 205.7 142 78.2
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 4.0e-51 204.9 140 80.0
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 1.5e-50 203.0 140 78.6
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 1.5e-50 203.0 141 77.3
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 5.8e-50 201.1 142 74.6
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 7.6e-50 200.7 142 76.1
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 7.6e-50 200.7 143 75.5
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 9.9e-50 200.3 142 76.1
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 9.9e-50 200.3 142 74.6
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 1.3e-49 199.9 139 75.5
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 2.9e-49 198.7 126 82.5
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 3.8e-49 198.4 142 76.1
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 4.9e-49 198.0 140 77.1
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 6.4e-49 197.6 142 76.8
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 8.4e-49 197.2 142 73.2
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 8.4e-49 197.2 140 77.9
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 1.4e-48 196.4 140 75.0
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 1.4e-48 196.4 140 76.4
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 1.4e-48 196.4 142 76.1
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 2.4e-48 195.7 116 87.9
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 4.1e-48 194.9 139 76.3
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 5.4e-48 194.5 131 77.9
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 5.4e-48 194.5 140 75.0
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 9.2e-48 193.7 142 72.5
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 9.2e-48 193.7 118 85.6
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 9.2e-48 193.7 111 89.2
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.2e-47 193.4 124 81.5
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 2.7e-47 192.2 136 74.3
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 2.7e-47 192.2 140 75.0
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 3.5e-47 191.8 145 72.4
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 3.5e-47 191.8 142 73.9
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.0e-47 191.0 141 73.8
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 7.8e-47 190.7 129 77.5
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.7e-46 189.5 120 80.8
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 1.7e-46 189.5 146 71.2
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 2.3e-46 189.1 166 65.1
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 3.0e-46 188.7 142 73.9
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 3.0e-46 188.7 118 83.1
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 3.0e-46 188.7 141 73.8
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 3.9e-46 188.3 154 68.2
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 3.9e-46 188.3 140 72.1
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 3.9e-46 188.3 141 73.0
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 3.9e-46 188.3 141 73.0
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 6.6e-46 187.6 146 71.2
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 8.6e-46 187.2 136 72.8
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 8.6e-46 187.2 136 72.8
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 8.6e-46 187.2 141 73.0
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 8.6e-46 187.2 118 82.2
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 1.9e-45 186.0 142 71.8
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 1.9e-45 186.0 158 67.1
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.5e-45 185.7 141 71.6
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 2.5e-45 185.7 146 72.6
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 5.6e-45 184.5 141 71.6
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 7.3e-45 184.1 142 70.4
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 9.6e-45 183.7 131 77.1
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 1.2e-44 183.3 147 70.7
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 1.2e-44 183.3 120 78.3
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 1.2e-44 183.3 141 72.3
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 1.6e-44 183.0 130 72.3
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 1.6e-44 183.0 121 79.3
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 2.1e-44 182.6 141 71.6
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 3.6e-44 181.8 141 71.6
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 3.6e-44 181.8 141 72.3
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 4.7e-44 181.4 120 75.8
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 6.2e-44 181.0 135 71.9
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 8.1e-44 180.6 120 75.0
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 8.1e-44 180.6 140 72.1
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 1.4e-43 179.9 141 70.9
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 4.0e-43 178.3 142 69.0
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 4.0e-43 178.3 130 72.3
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 5.2e-43 177.9 141 69.5
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.9e-43 177.6 120 74.2
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 6.9e-43 177.6 141 70.2
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 8.9e-43 177.2 141 68.8
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.6e-42 175.6 138 71.0
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 1.3e-41 173.3 118 73.7
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 2.9e-41 172.2 143 69.9
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 1.9e-40 169.5 146 65.8
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 4.2e-40 168.3 142 65.5
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 5.4e-40 167.9 141 66.0
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 4.6e-39 164.9 140 62.9
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 4.6e-39 164.9 140 62.9
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 4.6e-39 164.9 141 68.1
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 1.0e-38 163.7 140 64.3
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 1.7e-38 162.9 139 64.7
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 1.7e-38 162.9 132 67.4
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 3.0e-38 162.2 145 62.8
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 1.9e-37 159.5 142 63.4
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 9.0e-35 150.6 146 60.3
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 5.8e-34 147.9 118 71.2
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 1.7e-33 146.4 150 58.0
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 4.2e-32 141.7 117 63.2
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 2.1e-31 139.4 117 61.5
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 4.6e-31 138.3 83 85.5
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 1.0e-30 137.1 140 57.1
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 1.3e-30 136.7 140 57.1
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 1.3e-30 136.7 145 56.6
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 1.8e-30 136.3 140 57.1
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 2.3e-30 136.0 140 56.4
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 2.3e-30 136.0 105 71.4
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 3.0e-30 135.6 140 56.4
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 3.0e-30 135.6 145 56.6
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 3.0e-30 135.6 146 56.2
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 5.1e-30 134.8 103 72.8
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 1.1e-29 133.7 103 71.8
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 1.9e-29 132.9 85 78.8
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 2.5e-29 132.5 107 69.2
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 4.3e-29 131.7 106 67.0
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 7.4e-29 131.0 83 81.9
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 9.6e-29 130.6 150 53.3
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 9.6e-29 130.6 147 53.7
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 1.3e-28 130.2 138 55.8
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 4.8e-28 128.3 128 55.5
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 1.5e-26 123.2 126 56.3
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 3.8e-25 118.6 73 84.9
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 3.8e-25 118.6 75 78.7
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 1.6e-23 113.2 96 57.3
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 7.9e-23 110.9 174 44.8
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 1.5e-21 106.7 73 72.6
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 6.7e-14 81.3 85 56.5
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 1.5e-13 80.1 91 51.6
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 2.8e-12 75.9 84 53.6
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 2.4e-11 72.8 70 61.4
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 1.1e-08 63.9 47 70.2
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 9.3e-08 60.8 36 77.8
Aa31LG10G7880 Aethionema arabicum HOM05D005449 ORTHO05D006916 1.2e-07 60.5 74 51.4
C06p20730 Brassica napus HOM05D005449 ORTHO05D027985 4.6e-07 58.5 66 51.5
BolC6t37256H Brassica oleracea HOM05D005449 ORTHO05D027985 4.6e-07 58.5 66 51.5
Hma1.2p1_0494F.1_g165230 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 6.1e-07 58.2 33 81.8
CBR_g10859 Chara braunii HOM05D005449 ORTHO05D006916 1.3e-06 57.0 106 33.0


User provided reference genes

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