Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00355 Striga asiatica HOM05D021624 ORTHO05D015999 4.4e-110 401.4 212 100.0
SGA_v2.0_scaffold1G00352 Striga asiatica HOM05D009637 ORTHO05D012223 6.9e-63 244.6 133 95.5
Migut.D00139 Erythranthe guttata HOM05D021624 ORTHO05D015999 4.5e-62 241.9 204 60.8
MSTRG.18138 Avicennia marina HOM05D021624 ORTHO05D015999 8.2e-56 221.1 203 59.6
MSTRG.21643 Avicennia marina HOM05D021624 ORTHO05D015999 5.5e-44 181.8 201 50.2
unitig_22.g5237 Utricularia gibba HOM05D021624 ORTHO05D015999 1.2e-43 180.6 209 50.2
unitig_0.g675 Utricularia gibba HOM05D021624 ORTHO05D015999 4.4e-41 172.2 204 48.5
Sc25g0000800 Simmondsia chinensis HOM05D003556 ORTHO05D003404 2.3e-13 80.1 140 35.7
CSS0044540 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 5.0e-13 79.0 137 37.2
CAN.G1155.33 Capsicum annuum HOM05D022522 ORTHO05D015999 1.2e-11 74.3 215 28.4
Dinv19674 Davidia involucrata HOM05D003556 ORTHO05D003404 2.8e-11 73.2 142 31.0
CsaV3_1G038650 Cucumis sativus L. HOM05D003556 ORTHO05D003404 1.8e-10 70.5 121 33.9
Sabra11G0000800 Salix brachista HOM05D003556 ORTHO05D003404 1.8e-10 70.5 178 26.4
Sed0024461 Sechium edule HOM05D003556 ORTHO05D003404 2.3e-10 70.1 174 31.6
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 3.0e-10 69.7 136 31.6
VMungo0720G1834 Vigna mungo HOM05D003556 ORTHO05D003404 3.0e-10 69.7 122 32.8
Psat0s1683g0040 Pisum sativum HOM05D003556 ORTHO05D003404 5.2e-10 68.9 145 31.0
Glyma.02G016700 Glycine max HOM05D003556 ORTHO05D003404 6.8e-10 68.6 120 30.8
Oeu011950.2 Olea europaea HOM05D004055 ORTHO05D004795 1.2e-09 67.8 107 35.5
Phvul.007G246800 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 1.2e-09 67.8 123 30.9
MD11G1307600 Malus domestica HOM05D003556 ORTHO05D003404 1.5e-09 67.4 148 26.4
Glyma.10G017300 Glycine max HOM05D003556 ORTHO05D003404 2.0e-09 67.0 120 31.7
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 2.0e-09 67.0 121 28.9
PGSC0003DMG400020591 Solanum tuberosum HOM05D022522 ORTHO05D015999 2.6e-09 66.6 205 29.3
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 3.4e-09 66.2 163 27.0
Ciclev10023798m.g Citrus clementina HOM05D003556 ORTHO05D003404 3.4e-09 66.2 163 33.7
Atru.chr5.1112 Acer truncatum HOM05D003556 ORTHO05D003404 4.4e-09 65.9 173 30.1
Peaxi162Scf00047g00005 Petunia axillaris HOM05D022522 ORTHO05D015999 4.4e-09 65.9 121 32.2
Sed0000124 Sechium edule HOM05D003556 ORTHO05D003404 4.4e-09 65.9 121 31.4
MELO3C017944.2 Cucumis melo HOM05D003556 ORTHO05D003404 5.7e-09 65.5 102 33.3
Solyc09g092350.1 Solanum lycopersicum HOM05D022522 ORTHO05D015999 5.7e-09 65.5 205 27.8
Sed0028173 Sechium edule HOM05D003556 ORTHO05D003404 7.5e-09 65.1 202 28.7
Haze_04964 Corylus avellana HOM05D003556 ORTHO05D003404 9.8e-09 64.7 104 32.7
CsaV3_4G000950 Cucumis sativus L. HOM05D003556 ORTHO05D003404 9.8e-09 64.7 118 31.4
Sed0018956 Sechium edule HOM05D003556 ORTHO05D003404 9.8e-09 64.7 121 32.2
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 9.8e-09 64.7 180 30.6
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 9.8e-09 64.7 158 29.1
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 1.3e-08 64.3 170 28.2
Sopen09g035250 Solanum pennellii HOM05D022522 ORTHO05D015999 2.2e-08 63.5 205 27.8
Potri.004G016500 Populus trichocarpa HOM05D003556 ORTHO05D003404 2.9e-08 63.2 163 25.8
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 6.4e-08 62.0 208 26.4
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 8.3e-08 61.6 167 28.1
Ca_20910_v3 Cicer arietinum L. HOM05D003556 ORTHO05D003404 1.1e-07 61.2 143 29.4
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 1.4e-07 60.8 120 27.5
HPP92_002230 Vanilla planifolia HOM05D003556 ORTHO05D003404 1.4e-07 60.8 160 28.1
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 2.4e-07 60.1 138 29.0
Cfa005888 Carpinus fangiana HOM05D003556 ORTHO05D003404 2.4e-07 60.1 130 29.2
Dinv40359 Davidia involucrata HOM05D003556 ORTHO05D003404 3.2e-07 59.7 136 33.8
A06p00030 Brassica napus HOM05D003556 ORTHO05D003404 5.4e-07 58.9 138 30.4
BraA06t23219Z Brassica rapa HOM05D003556 ORTHO05D003404 5.4e-07 58.9 138 30.4
Lalb_Chr06g0166521 Lupinus albus HOM05D003556 ORTHO05D003404 5.4e-07 58.9 142 28.2
CANSAT25G1336 Cannabis sativa HOM05D003556 ORTHO05D003404 7.0e-07 58.5 120 31.7
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 7.0e-07 58.5 157 26.8
Thhalv10012280m.g Eutrema salsugineum HOM05D003556 ORTHO05D003404 7.0e-07 58.5 172 26.2
Lalb_Chr02g0146451 Lupinus albus HOM05D003556 ORTHO05D003404 7.0e-07 58.5 150 27.3
BcaC08g44217 Brassica carinata HOM05D003556 ORTHO05D003404 9.2e-07 58.2 140 27.1
C06p16220 Brassica napus HOM05D003556 ORTHO05D003404 9.2e-07 58.2 140 27.1
BolC6t36819H Brassica oleracea HOM05D003556 ORTHO05D003404 9.2e-07 58.2 140 27.1
Duzib052G0880 Durio zibethinus HOM05D001578 ORTHO05D001207 9.2e-07 58.2 119 28.6
QL12p028082 Quercus lobata HOM05D003556 ORTHO05D003404 9.2e-07 58.2 164 30.5
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 1.2e-06 57.8 136 32.4
Lalb_Chr04g0259851 Lupinus albus HOM05D003556 ORTHO05D003404 1.2e-06 57.8 123 28.5
PGR119G1148 Punica granatum HOM05D003556 ORTHO05D003404 1.2e-06 57.8 147 26.5
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 1.6e-06 57.4 175 27.4
BraA05t20629Z Brassica rapa HOM05D003556 ORTHO05D003404 2.0e-06 57.0 140 26.4
Sp1g41350 Schrenkiella parvula HOM05D003556 ORTHO05D003404 2.0e-06 57.0 172 24.4
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 2.7e-06 56.6 122 27.0
Phvul.001G208800 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 2.7e-06 56.6 137 29.9
TPR.G9645 Trifolium pratense HOM05D003556 ORTHO05D003404 3.5e-06 56.2 108 29.6
Medtr7g108865 Medicago truncatula HOM05D003556 ORTHO05D003404 4.6e-06 55.8 125 28.0
THA.LOC104825958 Tarenaya hassleriana HOM05D003556 ORTHO05D003404 4.6e-06 55.8 137 30.7
A05p17320 Brassica napus HOM05D003556 ORTHO05D003404 5.9e-06 55.5 140 25.7
Phvul.001G209000 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 7.8e-06 55.1 123 28.5
Sabra01G0098200 Salix brachista HOM05D003556 ORTHO05D003404 7.8e-06 55.1 167 25.7


User provided reference genes

Program Settings