Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00311 Striga asiatica HOM05D028422 ORTHO05D004107 3.6e-192 674.9 371 100.0
SGA_v2.0_scaffold335G49138 Striga asiatica HOM05D028422 ORTHO05D004107 4.6e-62 242.7 117 97.4
SGA_v2.0_scaffold29G12075 Striga asiatica HOM05D028422 ORTHO05D004107 9.0e-58 228.4 266 50.8
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.9e-22 109.0 317 30.6
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.2e-19 99.0 311 28.3
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-18 97.4 311 28.9
Dinv05208 Davidia involucrata HOM05D008850 ORTHO05D004107 2.2e-16 90.9 299 25.8
Sopen02g005760 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-15 87.0 272 29.4
Sopen03g035430 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-15 87.0 272 29.4
Sopen04g025960 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-15 87.0 272 29.4
Sopen08g018320 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-15 87.0 272 29.4
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.2e-15 85.9 316 24.1
SGA_v2.0_scaffold13G06774 Striga asiatica HOM05D024400 ORTHO05D004107 9.4e-15 85.5 142 34.5
Hma1.2p1_0327F.1_g126250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.1e-14 82.8 281 30.2
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 2.3e-13 80.9 285 24.9
Rhsim02G0014700 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.3e-13 80.9 315 24.4
Hma1.2p1_0014F.1_g010150 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.7e-12 75.5 319 23.2
Hma1.2p1_1228F.1_g268660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-11 75.1 275 27.3
Hma1.2p1_2618F.1_g325525 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-11 75.1 275 27.3
CSS0040604 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 3.7e-11 73.6 253 24.1
CSS0012068 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 8.2e-11 72.4 253 24.9
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-10 70.9 302 23.5
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 9.1e-10 68.9 231 36.4
SGA_v2.0_scaffold6G03405 Striga asiatica HOM05D024400 ORTHO05D004107 9.1e-10 68.9 215 33.0
Peaxi162Scf00460g00022 Petunia axillaris HOM05D010806 ORTHO05D012347 1.6e-09 68.2 154 30.5
Dinv24545 Davidia involucrata HOM05D008850 ORTHO05D004107 2.0e-09 67.8 231 23.8
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 2.6e-09 67.4 229 37.1
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 3.5e-09 67.0 228 33.3
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.5e-09 66.6 328 23.8
Peaxi162Scf00300g00016 Petunia axillaris HOM05D010806 ORTHO05D012347 4.5e-09 66.6 151 33.8
Hma1.2p1_0512F.1_g169320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-08 65.1 132 28.8
Hma1.2p1_1104F.1_g257420 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-08 65.1 276 24.6
Peaxi162Scf00254g00711 Petunia axillaris HOM05D010806 ORTHO05D012347 1.7e-08 64.7 151 32.5
Peaxi162Scf01130g00022 Petunia axillaris HOM05D010806 ORTHO05D012347 1.7e-08 64.7 153 30.1
vmacro00841 Vaccinium macrocarpon HOM05D000503 ORTHO05D000361 1.7e-08 64.7 146 38.4
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 2.2e-08 64.3 207 27.1
SGA_v2.0_scaffold130G34201 Striga asiatica HOM05D024400 ORTHO05D004107 2.9e-08 63.9 231 27.3
Dinv18502 Davidia involucrata HOM05D008850 ORTHO05D004107 3.8e-08 63.5 205 25.9
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 6.5e-08 62.8 117 35.0
HanXRQChr08g0224731 Helianthus annuus HOM05D008850 ORTHO05D004107 6.5e-08 62.8 117 29.9
Rhsim02G0066100 Rhododendron simsii HOM05D000017 ORTHO05D050649 6.5e-08 62.8 143 38.5
Rhsim04G0035600 Rhododendron simsii HOM05D000054 ORTHO05D000171 1.1e-07 62.0 356 27.2
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-07 60.8 311 22.5
CAN.G113.5 Capsicum annuum HOM05D028422 ORTHO05D004107 4.2e-07 60.1 107 31.8
Dinv11221 Davidia involucrata HOM05D000017 ORTHO05D012861 5.5e-07 59.7 117 32.5
Rhsim08G0011600 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.1e-06 57.8 136 30.9
Hma1.2p1_0525F.1_g172635 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.7e-06 57.4 268 23.5
Peaxi162Scf00423g00006 Petunia axillaris HOM05D010806 ORTHO05D012347 2.7e-06 57.4 129 34.9
Dinv31185 Davidia involucrata HOM05D008850 ORTHO05D004107 3.6e-06 57.0 222 23.9
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.6e-06 57.0 146 32.2
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 57.0 127 27.6
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 3.6e-06 57.0 127 27.6
Rhsim02G0022000 Rhododendron simsii HOM05D009581 ORTHO05D004107 4.7e-06 56.6 314 23.6
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-06 56.6 127 27.6
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 6.1e-06 56.2 122 27.9
FAN19G0254 Fragaria x ananassa HOM05D047127 ORTHO05D004107 8.0e-06 55.8 293 23.9


User provided reference genes

Program Settings