Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 5.5e-75 284.3 147 100.0
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 1.4e-43 179.9 143 70.6
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.5e-32 143.3 127 66.9
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 8.5e-28 127.5 124 57.3
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.1e-27 127.1 124 57.3
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 9.1e-22 107.5 126 49.2
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 1.2e-21 107.1 131 48.9
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 2.3e-20 102.8 124 49.2
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.9e-19 99.8 146 44.5
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.6e-18 96.7 127 46.5
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 4.4e-16 88.6 128 43.8
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 9.8e-16 87.4 139 44.6
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 2.2e-15 86.3 146 43.2
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 8.3e-15 84.3 120 46.7
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.4e-14 83.6 151 41.1
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 9.2e-14 80.9 126 40.5
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 1.6e-13 80.1 151 41.7
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 2.0e-13 79.7 121 42.1
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 2.0e-13 79.7 113 44.2
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.7e-13 79.3 129 41.1
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.5e-13 79.0 129 42.6
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.7e-12 76.6 140 35.7
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.7e-12 76.6 123 40.7
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 3.8e-12 75.5 116 44.8
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 5.0e-12 75.1 103 45.6
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 1.1e-11 73.9 121 41.3
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.5e-11 73.6 115 40.9
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 1.5e-11 73.6 144 33.3
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.9e-11 73.2 139 37.4
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.5e-11 72.8 132 41.7
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 2.5e-11 72.8 154 36.4
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 3.3e-11 72.4 132 40.2
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 5.6e-11 71.6 146 38.4
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 7.3e-11 71.2 105 46.7
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 7.3e-11 71.2 138 41.3
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 1.2e-10 70.5 141 38.3
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.2e-10 70.5 111 41.4
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 1.6e-10 70.1 117 38.5
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 4.7e-10 68.6 106 43.4
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 6.1e-10 68.2 130 40.8
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 8.0e-10 67.8 138 35.5
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.4e-09 67.0 122 37.7
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.4e-09 67.0 144 38.9
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 1.4e-09 67.0 151 35.1
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.3e-09 66.2 132 36.4
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.3e-09 66.2 132 36.4
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.3e-09 66.2 132 36.4
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 2.3e-09 66.2 141 36.2
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 2.3e-09 66.2 120 36.7
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 3.1e-09 65.9 135 37.8
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 3.1e-09 65.9 125 37.6
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 4.0e-09 65.5 111 41.4
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 5.2e-09 65.1 112 41.1
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 5.2e-09 65.1 124 37.1
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 6.8e-09 64.7 110 42.7
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 1.5e-08 63.5 130 37.7
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.0e-08 63.2 117 39.3
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 2.0e-08 63.2 125 37.6
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.0e-08 63.2 151 34.4
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 2.0e-08 63.2 110 37.3
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 2.0e-08 63.2 135 34.8
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 5.8e-08 61.6 130 35.4
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 5.8e-08 61.6 146 30.8
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.8e-08 61.6 120 37.5
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 7.5e-08 61.2 106 40.6
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 7.5e-08 61.2 133 32.3
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 9.8e-08 60.8 119 38.7
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 9.8e-08 60.8 134 35.1
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.3e-07 60.5 130 36.9
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 1.3e-07 60.5 128 35.2
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.7e-07 60.1 126 34.1
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.9e-07 59.3 120 36.7
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 2.9e-07 59.3 134 34.3
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 3.7e-07 58.9 124 37.1
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 3.7e-07 58.9 122 36.1
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 4.9e-07 58.5 108 39.8
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 4.9e-07 58.5 108 39.8
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 4.9e-07 58.5 108 39.8
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 4.9e-07 58.5 119 33.6
EL10Ac9g21553 Beta vulgaris HOM05D026734 ORTHO05D006213 6.4e-07 58.2 111 35.1
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.4e-07 58.2 132 36.4
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 6.4e-07 58.2 112 35.7
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 8.3e-07 57.8 108 38.9
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 8.3e-07 57.8 131 36.6
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 1.9e-06 56.6 118 34.7
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.4e-06 56.2 119 32.8
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 2.4e-06 56.2 121 35.5
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 4.1e-06 55.5 109 37.6
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 4.1e-06 55.5 131 36.6
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 7.0e-06 54.7 144 36.1


User provided reference genes

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