Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 3.3e-272 941.0 454 100.0
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 1.3e-167 593.6 421 74.3
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 2.0e-160 569.7 418 70.8
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 4.3e-62 243.0 405 41.2
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 2.6e-59 233.8 339 42.5
SGA_v2.0_scaffold8G04360 Striga asiatica HOM05D011185 ORTHO05D010595 4.5e-59 233.0 418 39.5
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 4.5e-51 206.5 409 38.1
SGA_v2.0_scaffold20G09149 Striga asiatica HOM05D011185 ORTHO05D010595 3.8e-50 203.4 391 38.4
SGA_v2.0_scaffold152G36797 Striga asiatica HOM05D011185 ORTHO05D010595 3.3e-46 190.3 319 38.6
SGA_v2.0_scaffold40G15666 Striga asiatica HOM05D011185 ORTHO05D010595 3.7e-45 186.8 343 37.0
SGA_v2.0_scaffold366G50043 Striga asiatica HOM05D011185 ORTHO05D010595 3.1e-44 183.7 411 33.6
SGA_v2.0_scaffold181G39784 Striga asiatica HOM05D017978 ORTHO05D010595 3.4e-43 180.3 372 35.5
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 2.7e-40 170.6 374 33.2
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 1.3e-39 168.3 347 36.0
SGA_v2.0_scaffold181G39793 Striga asiatica HOM05D017978 ORTHO05D010595 8.7e-39 165.6 373 34.3
SGA_v2.0_scaffold117G32318 Striga asiatica HOM05D011185 ORTHO05D010595 5.7e-38 162.9 347 36.3
SGA_v2.0_scaffold181G39796 Striga asiatica HOM05D017978 ORTHO05D010595 8.5e-34 149.1 382 33.5
SGA_v2.0_scaffold100G29621 Striga asiatica HOM05D012911 ORTHO05D010595 1.8e-31 141.4 394 28.9
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 6.7e-31 139.4 412 29.6
SGA_v2.0_scaffold181G39794 Striga asiatica HOM05D017978 ORTHO05D010595 8.8e-31 139.0 351 33.6
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 2.0e-30 137.9 232 38.8
SGA_v2.0_scaffold1G00265 Striga asiatica HOM05D017978 ORTHO05D010595 3.1e-28 130.6 250 40.8
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 2.6e-27 127.5 408 29.2
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 5.9e-27 126.3 262 33.2
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 5.9e-27 126.3 277 33.2
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 5.9e-27 126.3 279 31.5
SGA_v2.0_scaffold89G27539 Striga asiatica HOM05D011185 ORTHO05D010595 2.2e-26 124.4 305 31.5
SGA_v2.0_scaffold84G26560 Striga asiatica HOM05D012911 ORTHO05D010595 7.2e-25 119.4 323 29.7
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 7.9e-24 115.9 261 34.9
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 1.1e-22 112.1 223 33.6
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 1.1e-22 112.1 415 26.3
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.7e-21 108.2 267 31.5
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.7e-21 107.1 267 32.6
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 8.2e-21 105.9 360 29.2
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.2e-21 105.9 267 31.8
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.4e-20 104.4 250 33.2
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 1.5e-19 101.7 362 28.7
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 4.5e-19 100.1 270 30.7
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.3e-18 98.6 278 28.8
SGA_v2.0_scaffold7G04010 Striga asiatica HOM05D012724 ORTHO05D010595 1.7e-18 98.2 282 30.9
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 6.5e-18 96.3 283 29.0
Gorai.011G276900 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.2e-17 94.0 358 26.3
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.2e-16 92.0 269 30.9
Gohir.D10G241700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.6e-16 91.7 347 26.8
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.7e-16 90.1 269 30.1
Gohir.D10G241600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 6.1e-16 89.7 346 26.6
SGA_v2.0_scaffold2492G54133 Striga asiatica HOM05D000007 ORTHO05D000039 2.3e-15 87.8 250 29.2
Gohir.A10G227500 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.0e-15 87.4 353 26.3
Gorai.011G281200 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.0e-15 87.4 267 28.8
SalBow1G7714 Salvia bowleyana HOM05D012950 ORTHO05D005165 5.2e-15 86.7 177 33.3
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.2e-15 86.7 264 31.8
Gohir.D10G241000 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.8e-15 85.9 348 26.7
SGA_v2.0_scaffold186G40188 Striga asiatica HOM05D000007 ORTHO05D010595 8.8e-15 85.9 251 28.3
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.0e-14 84.7 200 34.5
Gorai.011G276100 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.0e-14 84.7 346 26.3
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.3e-14 84.0 251 27.9
Gorai.011G281100 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.3e-14 84.0 352 26.1
SGA_v2.0_scaffold223G42883 Striga asiatica HOM05D000002 ORTHO05D000001 3.3e-14 84.0 264 28.0
TWI23G0750 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.4e-14 83.6 249 28.1
Gohir.D10G240516 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.4e-14 82.8 346 26.3
Gohir.D10G241100 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.4e-14 82.8 346 26.3
TWI14G1098 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.4e-14 82.8 301 26.6
Gohir.D10G241008 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.7e-14 82.4 346 26.6
Gorai.011G276700 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.7e-13 80.5 268 28.7
Solyc07g044920.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 4.8e-13 80.1 355 23.1
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.8e-13 80.1 276 30.1
Cfa000425 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.3e-13 79.7 287 24.7
Migut.M00112 Erythranthe guttata HOM05D000007 ORTHO05D000039 6.3e-13 79.7 274 26.3
CSS0003262 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.1e-12 79.0 274 24.8
EL10Ac9g22770 Beta vulgaris HOM05D000007 ORTHO05D000039 1.4e-12 78.6 277 27.4
Gohir.D04G045600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.4e-12 77.8 366 25.4
Thecc.10G169200 Theobroma cacao HOM05D000007 ORTHO05D000039 2.4e-12 77.8 385 25.2
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.1e-12 77.4 366 26.0
SGA_v2.0_scaffold39G15154 Striga asiatica HOM05D012724 ORTHO05D010595 5.3e-12 76.6 245 29.4
Gorai.011G276500 Gossypium raimondii HOM05D000007 ORTHO05D000039 9.1e-12 75.9 284 27.1
CiPaw.07G024100 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.6e-11 75.1 364 24.5
Gorai.012G050800 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.6e-11 75.1 366 25.4
Prupe.6G318300 Prunus persica HOM05D000007 ORTHO05D000039 1.6e-11 75.1 249 25.7
SalBow6G4842 Salvia bowleyana HOM05D012950 ORTHO05D000017 1.6e-11 75.1 225 29.8
SalBow4G2701 Salvia bowleyana HOM05D000412 ORTHO05D000429 2.0e-11 74.7 339 26.8
SalBow6G1338 Salvia bowleyana HOM05D012950 ORTHO05D000039 2.0e-11 74.7 267 25.5
MD09G1130700 Malus domestica HOM05D000007 ORTHO05D000039 5.9e-11 73.2 241 27.0
TWI53G1032 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.9e-11 73.2 267 27.0
Dinv05295 Davidia involucrata HOM05D000007 ORTHO05D000039 7.7e-11 72.8 221 28.1
Gohir.A10G227233 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.7e-11 72.8 273 27.5
CiPaw.07G024200 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.0e-10 72.4 363 23.4
CiPaw.07G024500 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.7e-10 71.6 365 23.6
Gohir.D10G240616 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.2e-10 71.2 281 26.3
Gohir.D10G241300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.2e-10 71.2 281 26.3
Ciclev10026927m.g Citrus clementina HOM05D000007 ORTHO05D000039 5.0e-10 70.1 292 24.7
Haze_03009 Corylus avellana HOM05D000007 ORTHO05D000039 5.0e-10 70.1 305 25.2
Actinidia10577 Actinidia chinensis HOM05D000007 ORTHO05D000039 6.5e-10 69.7 261 24.9
Gohir.A10G227401 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.5e-10 69.3 176 30.1
SalBow6G2994 Salvia bowleyana HOM05D000007 ORTHO05D000017 8.5e-10 69.3 280 26.8
Gohir.D10G240608 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-09 68.9 210 28.1
FvH4_1g04511 Fragaria vesca HOM05D000007 ORTHO05D005026 1.5e-09 68.6 186 30.1
Gohir.D10G241400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.5e-09 68.6 235 27.7
Peaxi162Scf01439g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 2.5e-09 67.8 255 28.2
FAN14G0731 Fragaria x ananassa HOM05D002144 ORTHO05D002170 3.2e-09 67.4 252 26.6
Gorai.011G276600 Gossypium raimondii HOM05D000007 ORTHO05D000039 4.2e-09 67.0 236 27.1
SGA_v2.0_scaffold7G04012 Striga asiatica HOM05D000449 ORTHO05D010595 4.2e-09 67.0 242 28.5
SalBow3G4328 Salvia bowleyana HOM05D000412 ORTHO05D000429 5.5e-09 66.6 258 25.6
vmacro05999 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 5.5e-09 66.6 250 24.8
Oeu002398.1 Olea europaea HOM05D000007 ORTHO05D000039 7.2e-09 66.2 260 26.5
Dinv24460 Davidia involucrata HOM05D000007 ORTHO05D000039 9.4e-09 65.9 255 26.3
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 9.4e-09 65.9 290 26.6
CAN.G1360.7 Capsicum annuum HOM05D000007 ORTHO05D000039 1.2e-08 65.5 237 26.6
Cfa007611 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.2e-08 65.5 145 33.1
FvH4_6g06831 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-08 65.5 251 25.9
PGSC0003DMG400024825 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.2e-08 65.5 293 28.0
FAN11G0170 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.6e-08 65.1 241 28.2
Hma1.2p1_0178F.1_g078420 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.6e-08 65.1 271 26.2
SalBow3G4636 Salvia bowleyana HOM05D000412 ORTHO05D000429 1.6e-08 65.1 258 25.2
PGSC0003DMG400024829 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.6e-08 65.1 289 25.6
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 2.1e-08 64.7 257 25.7
FvH4_3g39980 Fragaria vesca HOM05D000007 ORTHO05D005026 2.7e-08 64.3 234 28.2
FAN16G2291 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.7e-08 64.3 234 28.2
Psat0s7414g0040 Pisum sativum HOM05D000007 ORTHO05D000039 3.6e-08 63.9 343 24.8
Prupe.6G319000 Prunus persica HOM05D000007 ORTHO05D000039 3.6e-08 63.9 278 25.9
SGA_v2.0_scaffold42G15875 Striga asiatica HOM05D011185 ORTHO05D403762 3.6e-08 63.9 167 31.1
FAN19G3004 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.7e-08 63.5 141 33.3
Dinv01173 Davidia involucrata HOM05D000007 ORTHO05D000039 8.0e-08 62.8 313 23.6
Psat2g002840 Pisum sativum HOM05D000007 ORTHO05D000039 8.0e-08 62.8 343 24.5
Thecc.10G169400 Theobroma cacao HOM05D000007 ORTHO05D000039 8.0e-08 62.8 144 34.7
Ciclev10027434m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.0e-07 62.4 256 25.4
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-07 62.4 167 32.3
Ciclev10027392m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.8e-07 61.6 362 21.8
FvH4_1g04521 Fragaria vesca HOM05D000007 ORTHO05D005026 2.3e-07 61.2 106 37.7
Nitab4.5_0003693g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.0e-07 60.8 328 24.4
Peaxi162Scf00326g00062 Petunia axillaris HOM05D000007 ORTHO05D000039 3.0e-07 60.8 302 24.8
Thecc.10G169000 Theobroma cacao HOM05D000007 ORTHO05D000039 3.0e-07 60.8 140 34.3
AUR62040420 Chenopodium quinoa HOM05D000007 ORTHO05D000039 4.0e-07 60.5 255 20.8
PSO170G3674 Papaver somniferum HOM05D000007 ORTHO05D000017 4.0e-07 60.5 273 24.5
SGA_v2.0_scaffold181G39785 Striga asiatica HOM05D017978 ORTHO05D010595 4.0e-07 60.5 125 38.4
AUR62038902 Chenopodium quinoa HOM05D000007 ORTHO05D000039 5.2e-07 60.1 259 23.2
PSO384G1847 Papaver somniferum HOM05D000007 ORTHO05D000017 6.8e-07 59.7 273 24.5
CAN.G212.10 Capsicum annuum HOM05D000007 ORTHO05D000039 8.8e-07 59.3 251 22.7
SalBow3G1233 Salvia bowleyana HOM05D000412 ORTHO05D000429 8.8e-07 59.3 237 24.9
DCAR_007412 Daucus carota HOM05D000007 ORTHO05D000039 1.2e-06 58.9 141 27.0
Dinv24458 Davidia involucrata HOM05D000007 ORTHO05D000039 1.2e-06 58.9 213 24.4
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 1.2e-06 58.9 285 26.3
Peaxi162Scf00152g00825 Petunia axillaris HOM05D000007 ORTHO05D000039 1.5e-06 58.5 272 24.6
FAN06G3806 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.6e-06 57.8 206 27.2
Nitab4.5_0000211g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.6e-06 57.8 270 26.3
SGA_v2.0_scaffold196G40939 Striga asiatica HOM05D000007 ORTHO05D010595 2.6e-06 57.8 92 42.4
FAN09G0047 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.4e-06 57.4 270 27.8
DCAR_028599 Daucus carota HOM05D000007 ORTHO05D000017 4.4e-06 57.0 201 23.9
FvH4_6g09801 Fragaria vesca HOM05D003981 ORTHO05D003666 4.4e-06 57.0 324 25.0
FAN14G1975 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.4e-06 57.0 324 25.0
Rhsim07G0005800 Rhododendron simsii HOM05D000007 ORTHO05D000039 4.4e-06 57.0 273 23.1
CANSAT54G0074 Cannabis sativa HOM05D000007 ORTHO05D000039 5.7e-06 56.6 129 29.5
Cpa.g.sc17.141 Carica papaya HOM05D000007 ORTHO05D000039 5.7e-06 56.6 266 22.9
PGSC0003DMG400029040 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.7e-06 56.6 259 23.2
Glyma.16G063600 Glycine max HOM05D000007 ORTHO05D000039 7.5e-06 56.2 283 25.8
Manes.07G007400 Manihot esculenta HOM05D000007 ORTHO05D000039 7.5e-06 56.2 287 22.6
Thecc.10G168700 Theobroma cacao HOM05D000007 ORTHO05D000039 9.7e-06 55.8 139 33.1


User provided reference genes

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