Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00251 Striga asiatica HOM05D008010 ORTHO05D010085 1.6e-79 299.7 159 100.0
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 3.1e-27 125.9 71 93.0
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 1.9e-24 116.7 70 91.4
SGA_v2.0_scaffold1G00067 Striga asiatica HOM05D008010 ORTHO05D010085 9.6e-21 104.4 140 50.7
SGA_v2.0_scaffold39G15223 Striga asiatica HOM05D011185 ORTHO05D010085 5.4e-16 88.6 78 66.7
Cfa000638 Carpinus fangiana HOM05D008010 ORTHO05D010085 1.2e-10 70.9 107 43.9
Lsat_1_v5_gn_1_109280 Lactuca sativa HOM05D008010 ORTHO05D010085 2.6e-10 69.7 70 55.7
Haze_06192 Corylus avellana HOM05D008010 ORTHO05D010085 3.4e-10 69.3 107 43.0
Sabra11G0057100 Salix brachista HOM05D008010 ORTHO05D010085 3.4e-10 69.3 108 43.5
Migut.M01016 Erythranthe guttata HOM05D008010 ORTHO05D010085 5.8e-10 68.6 130 38.5
Sabra11G0053600 Salix brachista HOM05D004193 ORTHO05D004862 9.9e-10 67.8 106 43.4
PGR031G1466 Punica granatum HOM05D008010 ORTHO05D010085 2.2e-09 66.6 108 41.7
GSVIVG01021245001 Vitis vinifera HOM05D008010 ORTHO05D010085 2.9e-09 66.2 105 41.9
RcHm_v2.0_Chr5g0011411 Rosa chinensis HOM05D008010 ORTHO05D010085 4.9e-09 65.5 105 39.0
Potri.011G069300 Populus trichocarpa HOM05D008010 ORTHO05D010085 8.4e-09 64.7 109 43.1
COL.COLO4_31257 Corchorus olitorius HOM05D008010 ORTHO05D010085 1.4e-08 63.9 95 43.2
FAN16G3557 Fragaria x ananassa HOM05D008010 ORTHO05D010085 2.4e-08 63.2 105 41.9
Prupe.4G065300 Prunus persica HOM05D008010 ORTHO05D010085 4.2e-08 62.4 86 44.2
FAN21G0683 Fragaria x ananassa HOM05D008010 ORTHO05D010085 5.5e-08 62.0 105 39.0
Cc02_g15430 Coffea canephora HOM05D008010 ORTHO05D010085 7.1e-08 61.6 110 41.8
FAN25G1163 Fragaria x ananassa HOM05D008010 ORTHO05D010085 7.1e-08 61.6 105 41.0
Manes.16G041900 Manihot esculenta HOM05D008010 ORTHO05D010085 7.1e-08 61.6 101 40.6
FvH4_3g07440 Fragaria vesca HOM05D008010 ORTHO05D010085 9.3e-08 61.2 105 41.0
Nn3g21124 Nelumbo nucifera HOM05D008010 ORTHO05D010085 1.6e-07 60.5 94 44.7
DCAR_027988 Daucus carota HOM05D008010 ORTHO05D010085 2.1e-07 60.1 104 40.4
Dinv12764 Davidia involucrata HOM05D008010 ORTHO05D010085 3.5e-07 59.3 109 43.1
ECA248G2359 Erigeron canadensis HOM05D008010 ORTHO05D010085 3.5e-07 59.3 88 46.6
MBI07_g09547_MAGBIO Magnolia biondii HOM05D008010 ORTHO05D010085 4.6e-07 58.9 99 43.4
Peaxi162Scf00371g00017 Petunia axillaris HOM05D008010 ORTHO05D010085 6.0e-07 58.5 89 41.6
Cpa.g.sc7.102 Carica papaya HOM05D008010 ORTHO05D010085 7.9e-07 58.2 89 40.4
MELO3C002669.2 Cucumis melo HOM05D008010 ORTHO05D010085 7.9e-07 58.2 95 41.1
Eucgr.D00477 Eucalyptus grandis HOM05D008010 ORTHO05D010085 1.0e-06 57.8 106 36.8
BcaC09g51471 Brassica carinata HOM05D008010 ORTHO05D010085 1.3e-06 57.4 70 50.0
C01p12720 Brassica napus HOM05D008010 ORTHO05D010085 1.3e-06 57.4 70 50.0
BolC1t01249H Brassica oleracea HOM05D008010 ORTHO05D010085 1.3e-06 57.4 70 50.0
Gorai.010G160200 Gossypium raimondii HOM05D008010 ORTHO05D010085 1.3e-06 57.4 97 40.2
Aqoxy1G02001 Aquilegia oxysepala HOM05D004193 ORTHO05D004862 1.8e-06 57.0 109 39.4
AUR62039459 Chenopodium quinoa HOM05D008010 ORTHO05D010085 1.8e-06 57.0 97 42.3
ClCG03G007530 Citrullus lanatus HOM05D008010 ORTHO05D010085 1.8e-06 57.0 103 40.8
CsaV3_1G033180 Cucumis sativus L. HOM05D008010 ORTHO05D010085 1.8e-06 57.0 95 42.1
Gohir.A06G132400 Gossypium hirsutum HOM05D008010 ORTHO05D010085 3.0e-06 56.2 96 41.7
Sed0009144 Sechium edule HOM05D008010 ORTHO05D010085 3.0e-06 56.2 91 40.7
BraA01t01022Z Brassica rapa HOM05D008010 ORTHO05D010085 3.9e-06 55.8 83 43.4
CiPaw.09G071800 Carya illinoinensis HOM05D008010 ORTHO05D010085 3.9e-06 55.8 121 37.2
Gohir.D06G137900 Gossypium hirsutum HOM05D008010 ORTHO05D010085 3.9e-06 55.8 83 41.0
TAR624G0391 Trochodendron aralioides HOM05D008010 ORTHO05D010085 5.1e-06 55.5 108 36.1
Ah.14g087050 Amaranthus hybridus HOM05D004193 ORTHO05D004862 6.7e-06 55.1 93 40.9
BcaNung05918 Brassica carinata HOM05D008010 ORTHO05D010085 6.7e-06 55.1 83 44.6
CDE03G0033 Ceratophyllum demersum HOM05D008010 ORTHO05D010085 6.7e-06 55.1 76 42.1
Nitab4.5_0002185g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 6.7e-06 55.1 101 39.6
PGSC0003DMG401028427 Solanum tuberosum HOM05D004193 ORTHO05D004862 6.7e-06 55.1 101 39.6


User provided reference genes

Program Settings