Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 5.8e-62 240.7 124 100.0
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 2.2e-48 195.7 124 79.8
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 6.9e-47 190.7 124 75.0
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.2e-46 189.9 124 75.8
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.5e-46 189.5 124 75.8
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 1.5e-46 189.5 124 74.2
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 2.0e-46 189.1 124 74.2
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.6e-46 188.7 124 76.6
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 3.4e-46 188.3 124 75.8
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 3.4e-46 188.3 124 77.4
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 1.0e-45 186.8 124 73.4
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.3e-45 186.4 124 72.6
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 2.2e-45 185.7 124 74.2
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 2.9e-45 185.3 140 69.3
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 5.0e-45 184.5 120 77.5
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.9e-44 182.6 122 73.8
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 1.9e-44 182.6 124 71.8
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 2.5e-44 182.2 120 74.2
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 2.5e-44 182.2 124 72.6
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 2.5e-44 182.2 124 73.4
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 3.2e-44 181.8 124 73.4
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 5.5e-44 181.0 124 72.6
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 7.2e-44 180.6 124 72.6
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 9.4e-44 180.3 124 71.8
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.2e-43 179.9 124 71.8
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.2e-43 179.9 122 73.0
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 1.2e-43 179.9 122 73.0
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.6e-43 179.5 124 72.6
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 2.1e-43 179.1 118 72.9
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 3.6e-43 178.3 124 71.0
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 4.6e-43 177.9 120 72.5
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 4.6e-43 177.9 122 71.3
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 7.9e-43 177.2 118 72.9
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 7.9e-43 177.2 123 69.9
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.0e-42 176.8 122 70.5
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.4e-42 176.4 118 72.0
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 1.4e-42 176.4 121 72.7
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 2.3e-42 175.6 118 72.9
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 3.0e-42 175.3 124 69.4
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 3.9e-42 174.9 118 72.9
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 5.1e-42 174.5 124 70.2
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 6.7e-42 174.1 121 67.8
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 6.7e-42 174.1 118 71.2
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 8.8e-42 173.7 118 71.2
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 8.8e-42 173.7 118 72.0
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 8.8e-42 173.7 118 72.0
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 8.8e-42 173.7 118 72.0
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 8.8e-42 173.7 118 72.0
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 8.8e-42 173.7 122 69.7
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 8.8e-42 173.7 121 66.9
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 1.1e-41 173.3 124 69.4
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.1e-41 173.3 123 69.9
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 1.1e-41 173.3 118 73.7
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.5e-41 172.9 118 71.2
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 2.0e-41 172.6 122 69.7
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 2.5e-41 172.2 118 73.7
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 3.3e-41 171.8 120 71.7
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 5.7e-41 171.0 122 67.2
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 7.4e-41 170.6 118 70.3
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 9.7e-41 170.2 119 69.7
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 1.3e-40 169.9 120 71.7
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 1.3e-40 169.9 125 70.4
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 2.2e-40 169.1 121 70.2
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 2.2e-40 169.1 121 69.4
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.7e-40 168.3 118 69.5
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 3.7e-40 168.3 122 68.9
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 6.3e-40 167.5 121 69.4
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 8.2e-40 167.2 124 67.7
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 6.9e-39 164.1 122 67.2
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 1.2e-38 163.3 123 64.2
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 1.2e-38 163.3 117 66.7
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 1.5e-38 162.9 122 64.8
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 3.4e-38 161.8 120 65.0
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 4.5e-38 161.4 122 64.8
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 5.9e-38 161.0 122 65.6
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 5.9e-38 161.0 122 65.6
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 7.7e-38 160.6 123 62.6
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 1.3e-37 159.8 124 62.1
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 1.3e-37 159.8 155 54.8
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 1.3e-37 159.8 122 63.1
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 2.9e-37 158.7 120 66.7
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.0e-37 157.9 108 72.2
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 5.0e-37 157.9 112 67.0
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 6.5e-37 157.5 124 63.7
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 1.1e-36 156.8 122 65.6
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 1.1e-36 156.8 122 64.8
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 2.5e-36 155.6 121 62.0
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 5.5e-36 154.5 112 65.2
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 7.9e-35 150.6 173 49.7
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 1.1e-31 140.2 101 65.3
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.4e-31 139.8 102 65.7
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 2.4e-31 139.0 87 74.7
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 7.0e-31 137.5 90 75.6
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.0e-29 133.7 113 58.4
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 2.5e-28 129.0 90 73.3
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 5.5e-28 127.9 89 74.2
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.8e-26 122.9 87 71.3
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.8e-26 122.9 86 72.1
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.0e-26 122.1 121 55.4
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 8.8e-26 120.6 87 72.4
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 2.0e-25 119.4 93 65.6
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 3.3e-25 118.6 90 65.6
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 4.4e-25 118.2 100 59.0
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 4.4e-25 118.2 124 51.6
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 5.7e-25 117.9 92 67.4
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 9.7e-25 117.1 117 52.1
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 8.2e-24 114.0 81 67.9
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 1.2e-22 110.2 112 48.2
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 1.7e-21 106.3 107 46.7
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.9e-20 102.8 85 58.8
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 1.6e-19 99.8 93 55.9
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 7.0e-15 84.3 54 70.4
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 1.8e-07 59.7 120 33.3


User provided reference genes

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