Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 2.3e-51 205.3 103 100.0
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 6.2e-41 170.6 100 81.0
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 1.8e-40 169.1 102 79.4
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 4.4e-39 164.5 100 77.0
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 5.4e-37 157.5 100 75.0
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 9.2e-37 156.8 100 73.0
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.2e-36 156.4 100 74.0
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 2.7e-36 155.2 99 72.7
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.7e-36 155.2 99 72.7
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 2.7e-36 155.2 99 72.7
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 2.7e-36 155.2 99 74.7
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 1.0e-35 153.3 100 72.0
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.7e-35 152.5 94 74.5
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.7e-35 152.5 99 70.7
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.7e-35 152.5 101 71.3
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 1.7e-35 152.5 100 71.0
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 1.7e-35 152.5 99 69.7
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 2.3e-35 152.1 100 72.0
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 3.0e-35 151.8 101 71.3
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 5.1e-35 151.0 100 70.0
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 5.1e-35 151.0 94 73.4
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 5.1e-35 151.0 90 75.6
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 6.6e-35 150.6 99 69.7
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 6.6e-35 150.6 102 65.7
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 6.6e-35 150.6 93 75.3
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 6.6e-35 150.6 100 72.0
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 6.6e-35 150.6 102 68.6
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 8.6e-35 150.2 94 72.3
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 8.6e-35 150.2 99 70.7
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 1.1e-34 149.8 100 70.0
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 1.1e-34 149.8 102 71.6
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.5e-34 149.4 100 69.0
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.5e-34 149.4 99 68.7
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 1.9e-34 149.1 97 70.1
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 3.3e-34 148.3 101 67.3
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 3.3e-34 148.3 95 71.6
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 3.3e-34 148.3 100 73.0
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 3.3e-34 148.3 103 68.9
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 4.3e-34 147.9 76 88.2
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 5.6e-34 147.5 100 67.0
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 5.6e-34 147.5 97 69.1
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 7.3e-34 147.1 103 65.0
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 9.5e-34 146.7 93 73.1
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 9.5e-34 146.7 92 72.8
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 1.2e-33 146.4 101 66.3
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 1.2e-33 146.4 99 68.7
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.6e-33 146.0 94 70.2
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.6e-33 146.0 88 72.7
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.6e-33 146.0 88 72.7
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.6e-33 146.0 100 68.0
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 1.6e-33 146.0 93 71.0
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 2.1e-33 145.6 102 65.7
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 2.1e-33 145.6 93 69.9
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 2.1e-33 145.6 93 69.9
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 2.1e-33 145.6 93 69.9
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 2.8e-33 145.2 90 72.2
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 2.8e-33 145.2 94 70.2
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 3.6e-33 144.8 101 65.3
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 3.6e-33 144.8 88 71.6
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 3.6e-33 144.8 90 74.4
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 4.7e-33 144.4 100 66.0
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 4.7e-33 144.4 100 66.0
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 4.7e-33 144.4 95 67.4
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 4.7e-33 144.4 96 66.7
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 4.7e-33 144.4 76 85.5
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 6.2e-33 144.1 77 83.1
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 6.2e-33 144.1 95 70.5
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 6.2e-33 144.1 88 71.6
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 8.1e-33 143.7 100 67.0
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.1e-32 143.3 98 67.3
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.1e-32 143.3 99 65.7
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.4e-32 142.9 100 65.0
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 1.4e-32 142.9 100 65.0
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.4e-32 142.9 100 65.0
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.4e-32 142.9 101 68.3
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 1.8e-32 142.5 88 69.3
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 1.8e-32 142.5 88 69.3
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 2.3e-32 142.1 88 69.3
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 3.1e-32 141.7 101 65.3
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 3.1e-32 141.7 94 68.1
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 4.0e-32 141.4 87 71.3
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 4.0e-32 141.4 99 68.7
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 1.2e-31 139.8 99 63.6
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 2.0e-31 139.0 102 63.7
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 7.5e-31 137.1 99 61.6
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 9.9e-31 136.7 99 66.7
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 2.2e-30 135.6 76 82.9
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 8.3e-30 133.7 96 62.5
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 2.4e-29 132.1 103 62.1
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 3.2e-29 131.7 76 77.6
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 9.2e-29 130.2 78 76.9
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 1.0e-27 126.7 96 61.5
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.7e-27 125.9 90 61.1
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.7e-27 125.9 101 61.4
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 1.5e-26 122.9 97 60.8
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 6.2e-25 117.5 86 65.1
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 4.0e-24 114.8 97 57.7
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 4.4e-23 111.3 84 59.5
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.2e-22 109.0 80 65.0
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 4.2e-21 104.8 95 55.8
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 9.2e-21 103.6 105 44.8
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 2.7e-20 102.1 90 54.4
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 1.3e-19 99.8 108 45.4
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.6e-17 92.8 76 57.9
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 2.1e-17 92.4 67 64.2
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 6.0e-12 74.3 116 34.5
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 1.2e-07 60.1 98 34.7


User provided reference genes

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