Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 1.3e-109 399.8 210 100.0
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 5.8e-54 214.9 127 92.9
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 3.0e-34 149.4 127 66.9
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 8.2e-32 141.4 121 65.3
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 7.6e-30 134.8 127 62.2
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 2.5e-28 129.8 126 61.9
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 1.6e-27 127.1 130 60.8
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 1.6e-27 127.1 127 61.4
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 2.7e-27 126.3 129 58.1
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 1.0e-26 124.4 125 60.8
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 3.0e-26 122.9 127 56.7
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 3.9e-26 122.5 127 59.1
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 6.7e-26 121.7 127 57.5
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 2.5e-25 119.8 133 57.1
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 5.7e-25 118.6 128 56.2
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 5.7e-25 118.6 127 54.3
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 7.4e-25 118.2 128 56.2
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 9.7e-25 117.9 127 58.3
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 9.7e-25 117.9 128 55.5
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 1.3e-24 117.5 254 34.3
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 2.2e-24 116.7 128 56.2
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 2.8e-24 116.3 126 57.1
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 3.7e-24 115.9 127 54.3
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 4.8e-24 115.5 127 55.9
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 4.8e-24 115.5 128 54.7
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 6.3e-24 115.2 127 53.5
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 6.3e-24 115.2 133 57.9
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 8.2e-24 114.8 139 54.7
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 1.1e-23 114.4 127 56.7
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.8e-23 113.6 107 64.5
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 1.8e-23 113.6 127 55.9
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 3.1e-23 112.8 135 53.3
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 6.9e-23 111.7 133 54.9
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 6.9e-23 111.7 126 57.1
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 9.0e-23 111.3 128 51.6
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 9.0e-23 111.3 130 54.6
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 1.2e-22 110.9 126 53.2
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 1.5e-22 110.5 127 56.7
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 1.5e-22 110.5 137 52.6
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 2.0e-22 110.2 129 58.1
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 3.4e-22 109.4 168 45.2
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 4.5e-22 109.0 103 62.1
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 7.7e-22 108.2 121 56.2
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.9e-21 106.3 128 57.0
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 2.9e-21 106.3 102 61.8
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 2.9e-21 106.3 106 59.4
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 6.5e-21 105.1 122 52.5
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 1.1e-20 104.4 108 58.3
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 1.4e-20 104.0 84 70.2
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 1.4e-20 104.0 127 55.1
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 3.2e-20 102.8 111 55.9
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 3.2e-20 102.8 125 55.2
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 4.2e-20 102.4 117 58.1
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 5.5e-20 102.1 103 59.2
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 9.4e-20 101.3 120 50.8
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.2e-19 100.9 101 58.4
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.1e-19 100.1 117 57.3
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 2.1e-19 100.1 104 59.6
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.7e-19 99.8 109 59.6
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 3.6e-19 99.4 103 57.3
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 4.6e-19 99.0 119 52.9
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 7.9e-19 98.2 129 52.7
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 7.9e-19 98.2 131 48.9
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 3.9e-18 95.9 195 38.5
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 3.9e-18 95.9 127 53.5
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 4.3e-17 92.4 103 57.3
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.3e-17 92.4 109 56.0
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 9.7e-17 91.3 100 54.0
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.3e-16 90.9 116 50.0
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 2.8e-16 89.7 133 48.1
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 3.7e-16 89.4 126 45.2
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 6.3e-16 88.6 126 46.8
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 2.4e-15 86.7 127 50.4
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.2e-14 84.3 130 45.4
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.2e-14 84.3 130 45.4
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 7.7e-14 81.6 126 43.7
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 1.7e-13 80.5 92 54.3
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 6.5e-13 78.6 133 40.6
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 6.5e-13 78.6 121 41.3
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 2.5e-12 76.6 88 52.3
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 2.5e-12 76.6 128 43.0
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 3.2e-12 76.3 129 44.2
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 1.2e-11 74.3 163 35.6
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 1.2e-11 74.3 205 32.2
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 2.1e-11 73.6 123 43.1
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 7.9e-11 71.6 147 38.1
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 7.9e-11 71.6 144 40.3
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 1.0e-10 71.2 136 39.0
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 1.0e-10 71.2 136 40.4
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 1.8e-10 70.5 131 39.7
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 5.1e-10 68.9 133 39.8
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 8.8e-10 68.2 76 57.9
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 8.8e-10 68.2 133 39.8
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 8.8e-10 68.2 133 39.8
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 8.8e-10 68.2 72 54.2
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 1.1e-09 67.8 158 36.1
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 7.4e-09 65.1 158 36.7
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 2.2e-08 63.5 104 42.3
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 2.8e-08 63.2 139 38.1
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 2.8e-08 63.2 135 38.5
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 6.3e-08 62.0 98 43.9
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 8.2e-08 61.6 105 41.9
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 8.2e-08 61.6 105 41.9
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 8.2e-08 61.6 43 74.4
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 1.4e-07 60.8 103 44.7


User provided reference genes

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