Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 6.5e-117 424.1 217 100.0
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 1.4e-98 363.2 219 85.4
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 4.3e-92 341.7 226 78.3
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 2.3e-90 335.9 226 75.2
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 6.8e-90 334.3 226 74.8
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 2.9e-88 328.9 218 76.1
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 3.7e-88 328.6 214 76.2
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 1.4e-87 326.6 213 76.5
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 1.4e-87 326.6 220 75.5
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 2.4e-87 325.9 218 74.8
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 1.2e-86 323.6 221 72.4
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 1.2e-86 323.6 218 76.6
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 2.7e-86 322.4 213 73.2
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 3.5e-86 322.0 214 73.8
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 3.5e-86 322.0 213 75.1
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 3.5e-86 322.0 221 73.8
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 4.6e-86 321.6 216 76.9
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 7.8e-86 320.9 214 74.3
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 7.8e-86 320.9 218 75.7
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 3.9e-85 318.5 218 74.8
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 5.0e-85 318.2 210 73.3
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 5.0e-85 318.2 214 74.8
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 6.6e-85 317.8 220 74.5
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 8.6e-85 317.4 226 72.1
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 1.1e-84 317.0 244 67.2
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 1.9e-84 316.2 214 72.9
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 2.5e-84 315.8 214 73.8
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.3e-84 315.5 217 72.4
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.3e-84 315.5 217 72.4
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 3.3e-84 315.5 217 74.2
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 4.3e-84 315.1 217 72.4
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 4.3e-84 315.1 236 69.5
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 5.6e-84 314.7 217 71.9
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 7.3e-84 314.3 215 73.5
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 9.5e-84 313.9 213 71.8
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 1.2e-83 313.5 221 73.8
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 1.6e-83 313.2 214 73.4
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 2.8e-83 312.4 220 72.3
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 3.6e-83 312.0 215 74.4
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 3.6e-83 312.0 210 73.3
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 3.6e-83 312.0 217 73.7
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 4.7e-83 311.6 213 71.8
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 4.7e-83 311.6 213 72.3
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 4.7e-83 311.6 218 73.4
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 4.7e-83 311.6 213 70.9
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 6.2e-83 311.2 217 71.4
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 6.2e-83 311.2 214 73.4
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 8.0e-83 310.8 217 73.3
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 3.1e-82 308.9 213 71.4
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 3.1e-82 308.9 212 72.6
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 5.2e-82 308.1 205 74.6
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 8.9e-82 307.4 213 71.8
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 8.9e-82 307.4 214 72.0
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 1.2e-81 307.0 216 70.4
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 1.2e-81 307.0 212 72.2
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 2.0e-81 306.2 214 72.9
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 2.0e-81 306.2 214 71.5
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 2.6e-81 305.8 218 70.6
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 3.4e-81 305.4 214 70.6
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 5.8e-81 304.7 217 69.1
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 7.5e-81 304.3 218 69.3
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.3e-80 303.5 221 72.4
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 2.2e-80 302.8 217 67.7
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 3.7e-80 302.0 215 70.7
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 3.7e-80 302.0 258 62.0
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 4.9e-80 301.6 216 69.4
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 6.4e-80 301.2 213 70.9
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 8.3e-80 300.8 213 70.4
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 1.4e-79 300.1 214 71.0
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 1.9e-79 299.7 215 68.8
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 4.1e-79 298.5 214 69.6
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 4.1e-79 298.5 214 69.6
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 4.1e-79 298.5 214 73.4
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 7.0e-79 297.7 210 69.5
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 2.7e-78 295.8 215 69.3
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 3.5e-78 295.4 225 66.7
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 4.6e-78 295.0 225 62.7
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 4.6e-78 295.0 225 62.7
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 6.0e-78 294.7 221 71.0
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 7.8e-78 294.3 206 74.3
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 7.8e-78 294.3 239 66.1
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 7.8e-78 294.3 215 69.3
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 1.0e-77 293.9 224 64.3
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 1.7e-77 293.1 224 63.8
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 3.0e-77 292.4 224 69.2
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 3.9e-77 292.0 224 62.5
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 5.0e-77 291.6 210 70.5
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 8.6e-77 290.8 224 62.5
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 1.1e-76 290.4 213 67.6
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 9.5e-76 287.3 224 62.1
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 9.5e-76 287.3 224 62.1
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 1.2e-75 287.0 224 62.5
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.6e-75 286.6 224 63.4
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 6.2e-75 284.6 224 66.1
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 6.2e-75 284.6 217 63.6
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 2.3e-74 282.7 215 65.6
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 3.1e-74 282.3 232 62.5
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 3.1e-74 282.3 217 66.8
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 5.2e-74 281.6 255 60.8
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.5e-73 280.0 215 66.0
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 2.6e-73 279.3 215 66.0
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 2.6e-73 279.3 219 61.6
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 1.1e-71 273.9 220 60.5
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 1.9e-71 273.1 211 64.5
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 5.4e-71 271.6 248 59.3
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 2.1e-70 269.6 206 68.9
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 2.7e-70 269.2 227 59.0
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 3.5e-70 268.9 191 68.6
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 1.1e-68 263.8 186 71.0
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.5e-68 263.5 151 79.5
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 5.6e-68 261.5 216 63.0
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 7.3e-68 261.2 200 63.5
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 8.4e-64 247.7 178 69.1
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 1.6e-59 233.4 190 64.2
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.1e-58 230.7 191 61.8
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 3.1e-58 229.2 216 55.1
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 6.9e-58 228.0 133 75.9
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 5.8e-57 224.9 238 50.0
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 9.3e-55 217.6 119 83.2
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 1.0e-53 214.2 111 89.2
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 2.8e-51 206.1 241 47.7
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 4.0e-50 202.2 218 54.6
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 1.7e-48 196.8 246 45.9
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 4.9e-48 195.3 201 51.2
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 2.6e-41 172.9 272 36.8
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 2.2e-40 169.9 100 77.0
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 3.9e-37 159.1 171 49.7
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 1.8e-34 150.2 178 49.4
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 3.1e-26 122.9 242 38.8
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.5e-12 77.4 40 90.0
MBI18_g05572_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 3.1e-10 69.7 42 73.8
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 2.6e-09 66.6 83 51.8
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 4.5e-09 65.9 38 73.7
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 5.9e-09 65.5 34 85.3
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 6.5e-08 62.0 199 29.6
LjContig00312_ERROPOS870357g0000946 Lotus japonicus HOM05D001916 ORTHO05D003272 4.2e-07 59.3 166 23.5
Lj2A178T48 Lonicera japonica HOM05D001916 ORTHO05D003272 2.1e-06 57.0 166 24.1
Medtr5g009930 Medicago truncatula HOM05D001916 ORTHO05D003272 6.1e-06 55.5 191 22.5
Rhsim09G0201200 Rhododendron simsii HOM05D001916 ORTHO05D003272 6.1e-06 55.5 208 22.6


User provided reference genes

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