Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00163 Striga asiatica HOM05D004353 ORTHO05D004989 1.8e-137 492.7 259 100.0
Oeu043896.1 Olea europaea HOM05D004353 ORTHO05D004989 1.9e-46 190.3 248 44.4
Migut.M00919 Erythranthe guttata HOM05D004353 ORTHO05D004989 2.6e-43 179.9 259 46.3
MSTRG.16235 Avicennia marina HOM05D004353 ORTHO05D004989 8.2e-42 174.9 256 44.9
Peaxi162Scf00008g03715 Petunia axillaris HOM05D004353 ORTHO05D004989 8.8e-36 154.8 245 41.6
Nitab4.5_0000214g0170 Nicotiana tabacum HOM05D004353 ORTHO05D004989 5.7e-35 152.1 251 41.8
Gohir.D10G228800 Gossypium hirsutum HOM05D004353 ORTHO05D004989 6.3e-34 148.7 210 47.1
Gorai.011G261300 Gossypium raimondii HOM05D004353 ORTHO05D004989 6.3e-34 148.7 235 44.3
Gorai.013G257700 Gossypium raimondii HOM05D004353 ORTHO05D004989 8.2e-34 148.3 210 46.7
Gohir.A13G222400 Gossypium hirsutum HOM05D004353 ORTHO05D004989 1.4e-33 147.5 235 43.0
Nitab4.5_0000518g0010 Nicotiana tabacum HOM05D004353 ORTHO05D004989 9.1e-33 144.8 251 40.6
Cc04_g05110 Coffea canephora HOM05D004353 ORTHO05D004989 1.3e-31 141.0 210 45.7
MD08G1231200 Malus domestica HOM05D004353 ORTHO05D004989 1.3e-31 141.0 205 45.4
unitig_61.g26169 Utricularia gibba HOM05D004353 ORTHO05D004989 1.3e-31 141.0 224 43.8
CAN.G162.60 Capsicum annuum HOM05D004353 ORTHO05D004989 1.7e-31 140.6 249 39.4
Gorai.012G140500 Gossypium raimondii HOM05D004353 ORTHO05D004989 2.2e-31 140.2 190 48.4
SalBow8G1390 Salvia bowleyana HOM05D004353 ORTHO05D004989 1.5e-30 137.5 252 41.3
Gohir.D13G227200 Gossypium hirsutum HOM05D004353 ORTHO05D004989 5.5e-30 135.6 215 45.6
Hma1.2p1_0017F.1_g011670 Hydrangea macrophylla HOM05D004353 ORTHO05D004989 1.4e-28 131.0 193 48.7
Thecc.09G282100 Theobroma cacao HOM05D004353 ORTHO05D004989 1.4e-28 131.0 195 44.1
Prupe.1G205800 Prunus persica HOM05D004353 ORTHO05D004989 4.0e-28 129.4 250 39.2
MD15G1424100 Malus domestica HOM05D004353 ORTHO05D004989 5.2e-28 129.0 206 44.7
FAN22G0682 Fragaria x ananassa HOM05D004353 ORTHO05D004989 3.4e-27 126.3 208 42.8
Solyc04g054460.3 Solanum lycopersicum HOM05D004353 ORTHO05D004989 5.7e-27 125.6 251 39.0
Sopen04g024280 Solanum pennellii HOM05D004353 ORTHO05D004989 5.7e-27 125.6 251 39.0
Eucgr.A01325 Eucalyptus grandis HOM05D004353 ORTHO05D004989 7.5e-27 125.2 205 44.4
RcHm_v2.0_Chr4g0406201 Rosa chinensis HOM05D004353 ORTHO05D004989 1.3e-26 124.4 207 42.5
FAN12G3936 Fragaria x ananassa HOM05D004353 ORTHO05D004989 3.7e-26 122.9 210 42.9
FAN12G4128 Fragaria x ananassa HOM05D004353 ORTHO05D004989 3.7e-26 122.9 210 42.9
PGR031G1729 Punica granatum HOM05D004353 ORTHO05D004989 6.3e-26 122.1 214 42.5
AL4G42450 Arabidopsis lyrata HOM05D004353 ORTHO05D004989 8.3e-26 121.7 225 41.3
FvH4_4g10550 Fragaria vesca HOM05D004353 ORTHO05D004989 8.3e-26 121.7 210 42.9
Manes.11G130500 Manihot esculenta HOM05D004353 ORTHO05D004989 8.3e-26 121.7 249 35.3
FAN17G1422 Fragaria x ananassa HOM05D004353 ORTHO05D004989 1.4e-25 120.9 210 42.4
Sabra06G0098000 Salix brachista HOM05D004353 ORTHO05D004989 1.4e-25 120.9 190 42.1
FAN07G2673 Fragaria x ananassa HOM05D004353 ORTHO05D004989 1.8e-25 120.6 210 41.9
AT2G43630 Arabidopsis thaliana HOM05D004353 ORTHO05D004989 2.4e-25 120.2 222 41.9
Potri.006G123800 Populus trichocarpa HOM05D004353 ORTHO05D004989 2.4e-25 120.2 190 42.6
Duzib168G0981 Durio zibethinus HOM05D004353 ORTHO05D004989 9.1e-25 118.2 211 37.0
Cpa.g.sc9.354 Carica papaya HOM05D004353 ORTHO05D004989 1.2e-24 117.9 244 37.7
GSVIVG01038129001 Vitis vinifera HOM05D004353 ORTHO05D004989 1.2e-24 117.9 239 37.7
Prupe.1G570000 Prunus persica HOM05D004353 ORTHO05D004989 1.6e-24 117.5 192 43.2
Sp4g25730 Schrenkiella parvula HOM05D004353 ORTHO05D004989 2.7e-24 116.7 223 41.3
BraA04t18750Z Brassica rapa HOM05D004353 ORTHO05D004989 3.5e-24 116.3 215 38.6
Atru.chr6.1925 Acer truncatum HOM05D004353 ORTHO05D004989 5.9e-24 115.5 243 37.0
Thhalv10001554m.g Eutrema salsugineum HOM05D004353 ORTHO05D004989 7.7e-24 115.2 218 39.4
Carub.0004s2616 Capsella rubella HOM05D004353 ORTHO05D004989 1.0e-23 114.8 222 40.5
PSO017G5600 Papaver somniferum HOM05D004353 ORTHO05D004989 1.0e-23 114.8 243 36.2
Aa31LG1G25350 Aethionema arabicum HOM05D004353 ORTHO05D004989 1.3e-23 114.4 233 37.3
COL.COLO4_19851 Corchorus olitorius HOM05D004353 ORTHO05D004989 1.3e-23 114.4 197 44.7
QL10p053348 Quercus lobata HOM05D004353 ORTHO05D004989 1.3e-23 114.4 253 37.9
QL10p054510 Quercus lobata HOM05D004353 ORTHO05D004989 1.7e-23 114.0 253 37.9
C04p70590 Brassica napus HOM05D004353 ORTHO05D004989 2.2e-23 113.6 259 37.1
PSO675G4101 Papaver somniferum HOM05D004353 ORTHO05D004989 3.8e-23 112.8 243 38.3
CANSAT54G2783 Cannabis sativa HOM05D004353 ORTHO05D004989 1.5e-22 110.9 171 45.6
BcaB06g29332 Brassica carinata HOM05D004353 ORTHO05D004989 1.9e-22 110.5 237 38.0
Sc05g0005560 Simmondsia chinensis HOM05D004353 ORTHO05D004989 1.9e-22 110.5 199 41.2
BcaC02g07160 Brassica carinata HOM05D004353 ORTHO05D004989 2.5e-22 110.2 216 38.4
BolC4t28561H Brassica oleracea HOM05D004353 ORTHO05D004989 2.5e-22 110.2 216 38.4
TWI63G0567 Tripterygium wilfordii HOM05D004353 ORTHO05D004989 2.5e-22 110.2 204 36.8
A04p32910 Brassica napus HOM05D004353 ORTHO05D004989 4.2e-22 109.4 216 38.9
Sed0022603 Sechium edule HOM05D004353 ORTHO05D004989 4.2e-22 109.4 198 39.4
TAR633G2112 Trochodendron aralioides HOM05D004353 ORTHO05D004989 7.2e-22 108.6 237 35.9
CARHR138810 Cardamine hirsuta HOM05D004353 ORTHO05D004989 9.4e-22 108.2 262 35.5
Glyma.09G118100 Glycine max HOM05D004353 ORTHO05D004989 9.4e-22 108.2 171 39.8
ClCG03G006580 Citrullus lanatus HOM05D004353 ORTHO05D004989 1.2e-21 107.8 229 36.7
Hund04296 Selenicereus undatus HOM05D004353 ORTHO05D004989 1.6e-21 107.5 236 33.5
CiPaw.02G101000 Carya illinoinensis HOM05D004353 ORTHO05D004989 2.1e-21 107.1 260 36.5
HanXRQChr10g0307981 Helianthus annuus HOM05D004353 ORTHO05D004989 2.1e-21 107.1 243 35.4
Cfa015265 Carpinus fangiana HOM05D004353 ORTHO05D004989 6.1e-21 105.5 195 33.8
CsaV3_1G036770 Cucumis sativus L. HOM05D004353 ORTHO05D004989 1.4e-20 104.4 209 35.9
Ciclev10021938m.g Citrus clementina HOM05D004353 ORTHO05D004989 3.0e-20 103.2 199 34.2
Glyma.07G165200 Glycine max HOM05D004353 ORTHO05D004989 8.8e-20 101.7 185 38.4
PGSC0003DMG400005514 Solanum tuberosum HOM05D004353 ORTHO05D004989 8.8e-20 101.7 164 42.1
AUR62025025 Chenopodium quinoa HOM05D004353 ORTHO05D004989 1.5e-19 100.9 213 36.6
ECA248G0230 Erigeron canadensis HOM05D004353 ORTHO05D004989 3.4e-19 99.8 212 40.1
TWI15G0091 Tripterygium wilfordii HOM05D004353 ORTHO05D004989 3.4e-19 99.8 183 39.3
TAR362G0930 Trochodendron aralioides HOM05D004353 ORTHO05D004989 3.4e-19 99.8 246 36.2
Gorai.013G194600 Gossypium raimondii HOM05D004353 ORTHO05D004989 4.4e-19 99.4 182 43.4
Ah.03g147060 Amaranthus hybridus HOM05D004353 ORTHO05D004989 9.8e-19 98.2 210 37.6
RcHm_v2.0_Chr2g0115921 Rosa chinensis HOM05D004353 ORTHO05D004989 1.3e-18 97.8 168 42.9
Aqoxy3G00280 Aquilegia oxysepala HOM05D004353 ORTHO05D004989 2.8e-18 96.7 242 35.1
arahy.Tifrunner.gnm1.ann1.ZXP0UV Arachis hypogaea HOM05D004353 ORTHO05D004989 1.1e-17 94.7 237 31.6
MSTRG.19791 Avicennia marina HOM05D004353 ORTHO05D004989 1.4e-17 94.4 116 40.5
BcaC07g40471 Brassica carinata HOM05D004353 ORTHO05D004989 1.4e-17 94.4 246 32.9
AUR62006505 Chenopodium quinoa HOM05D004353 ORTHO05D004989 1.4e-17 94.4 221 30.3
VMungo1215G1727 Vigna mungo HOM05D004353 ORTHO05D004989 1.8e-17 94.0 183 36.6
DCAR_005473 Daucus carota HOM05D004353 ORTHO05D004989 2.4e-17 93.6 222 36.0
Nitab4.5_0001095g0110 Nicotiana tabacum HOM05D004353 ORTHO05D004989 3.1e-17 93.2 140 42.9
MELO3C002758.2 Cucumis melo HOM05D004353 ORTHO05D004989 4.1e-17 92.8 240 33.3
Lsat_1_v5_gn_5_149741 Lactuca sativa HOM05D004353 ORTHO05D004989 5.4e-17 92.4 220 34.1
THA.LOC104803988 Tarenaya hassleriana HOM05D004353 ORTHO05D004989 5.4e-17 92.4 222 32.4
BcaC07g40494 Brassica carinata HOM05D004353 ORTHO05D004989 9.1e-17 91.7 190 37.9
C08p34630 Brassica napus HOM05D004353 ORTHO05D004989 9.1e-17 91.7 190 37.9
BolC8t51065H Brassica oleracea HOM05D004353 ORTHO05D004989 9.1e-17 91.7 190 37.9
Sp5g03540 Schrenkiella parvula HOM05D004353 ORTHO05D004989 9.1e-17 91.7 205 38.0
Atru.chr4.1388 Acer truncatum HOM05D004353 ORTHO05D004989 1.6e-16 90.9 240 32.5
Lj2g0015848 Lotus japonicus HOM05D004353 ORTHO05D004989 1.6e-16 90.9 194 40.2
FvH4_1g21910 Fragaria vesca HOM05D004353 ORTHO05D004989 1.0e-15 88.2 174 40.2
Sed0011106 Sechium edule HOM05D004353 ORTHO05D004989 2.3e-15 87.0 212 34.9
arahy.Tifrunner.gnm1.ann1.WL5XYL Arachis hypogaea HOM05D004353 ORTHO05D004989 3.8e-15 86.3 196 33.7
A09p51910 Brassica napus HOM05D004353 ORTHO05D004989 5.0e-15 85.9 237 35.0
BraA09t40627Z Brassica rapa HOM05D004353 ORTHO05D004989 8.6e-15 85.1 237 34.6
FAN19G0170 Fragaria x ananassa HOM05D004353 ORTHO05D004989 1.1e-14 84.7 178 38.8
Dinv40298 Davidia involucrata HOM05D004353 ORTHO05D004989 1.5e-14 84.3 145 44.8
THA.LOC104802322 Tarenaya hassleriana HOM05D004353 ORTHO05D004989 1.5e-14 84.3 209 35.4
FAN26G0137 Fragaria x ananassa HOM05D004353 ORTHO05D004989 2.5e-14 83.6 170 38.8
Duzib150G0228 Durio zibethinus HOM05D004353 ORTHO05D004989 5.5e-14 82.4 191 36.1
Ca_17991_v3 Cicer arietinum L. HOM05D004353 ORTHO05D004989 9.5e-14 81.6 180 35.6
FAN28G0555 Fragaria x ananassa HOM05D004353 ORTHO05D004989 1.2e-13 81.3 167 38.3
Haze_01374 Corylus avellana HOM05D004353 ORTHO05D004989 2.1e-13 80.5 186 38.7
MBI08_g25559_MAGBIO Magnolia biondii HOM05D004353 ORTHO05D004989 3.6e-13 79.7 170 36.5
Gorai.012G140700 Gossypium raimondii HOM05D004353 ORTHO05D004989 8.0e-13 78.6 104 39.4
Phvul.003G023800 Phaseolus vulgaris HOM05D004353 ORTHO05D004989 1.4e-12 77.8 196 32.1
EL10Ac6g15412 Beta vulgaris HOM05D004353 ORTHO05D004989 2.3e-12 77.0 218 33.5
ATR0743G161 Amborella trichopoda HOM05D004353 ORTHO05D004989 4.0e-12 76.3 183 36.6
Atru.chr6.1923 Acer truncatum HOM05D004353 ORTHO05D004989 6.8e-12 75.5 116 37.9
AL5G41660 Arabidopsis lyrata HOM05D004353 ORTHO05D004989 9.8e-11 71.6 207 35.3
Actinidia06605 Actinidia chinensis HOM05D004353 ORTHO05D004989 1.7e-10 70.9 255 32.9
Carub.0005s2635 Capsella rubella HOM05D004353 ORTHO05D004989 1.7e-10 70.9 198 34.8
CDE05G3235 Ceratophyllum demersum HOM05D004353 ORTHO05D004989 2.2e-10 70.5 134 40.3
TPR.G36930 Trifolium pratense HOM05D004353 ORTHO05D004989 2.2e-10 70.5 165 37.6
Psat6g042920 Pisum sativum HOM05D004353 ORTHO05D004989 2.8e-10 70.1 235 31.1
AT3G59640 Arabidopsis thaliana HOM05D004353 ORTHO05D004989 3.7e-10 69.7 208 35.1
Lalb_Chr21g0317861 Lupinus albus HOM05D004353 ORTHO05D004989 5.4e-09 65.9 190 36.3
Lalb_Chr10g0096191 Lupinus albus HOM05D004353 ORTHO05D004989 7.0e-09 65.5 205 35.6
MD10G1168700 Malus domestica HOM05D004353 ORTHO05D004989 2.0e-08 63.9 57 57.9
Medtr1g030860 Medicago truncatula HOM05D004353 ORTHO05D004989 3.5e-08 63.2 250 32.0
Lalb_Chr02g0158251 Lupinus albus HOM05D004353 ORTHO05D004989 1.0e-07 61.6 158 38.6
Os02g0606000 Oryza sativa ssp. japonica HOM05D004353 ORTHO05D004989 6.6e-07 58.9 214 28.0
Zm00001eb246630 Zea mays HOM05D004353 ORTHO05D004989 8.6e-07 58.5 201 28.4
Lj2g0004083 Lotus japonicus HOM05D004353 ORTHO05D004989 4.3e-06 56.2 183 36.1


User provided reference genes

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