Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00162 Striga asiatica HOM05D002553 ORTHO05D002767 7.1e-209 730.3 363 100.0
MSTRG.16234 Avicennia marina HOM05D002553 ORTHO05D002767 9.2e-132 474.2 377 69.5
Migut.M00920 Erythranthe guttata HOM05D002553 ORTHO05D002767 3.4e-126 455.7 378 65.3
CSS0035336 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 3.2e-100 369.4 399 53.6
Sopen10g005180 Solanum pennellii HOM05D002553 ORTHO05D002767 1.9e-97 360.1 392 52.3
Solyc10g009400.3 Solanum lycopersicum HOM05D002553 ORTHO05D002767 2.5e-97 359.8 391 52.4
Nitab4.5_0001510g0020 Nicotiana tabacum HOM05D002553 ORTHO05D002767 4.3e-97 359.0 413 49.9
TWI56G0412 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 7.3e-97 358.2 389 51.4
MD04G1209100 Malus domestica HOM05D002553 ORTHO05D002767 1.3e-96 357.5 396 51.0
Hund07046 Selenicereus undatus HOM05D002553 ORTHO05D002767 2.8e-96 356.3 366 52.2
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 2.8e-96 356.3 378 55.6
Cc02_g32700 Coffea canephora HOM05D002553 ORTHO05D002767 4.0e-95 352.4 403 52.6
Potri.005G039000 Populus trichocarpa HOM05D002553 ORTHO05D002767 2.0e-94 350.1 424 47.9
HanXRQChr14g0445961 Helianthus annuus HOM05D002553 ORTHO05D002767 2.6e-94 349.7 370 51.1
CiPaw.07G014700 Carya illinoinensis HOM05D002553 ORTHO05D002767 4.5e-94 349.0 422 49.1
Nitab4.5_0000176g0030 Nicotiana tabacum HOM05D002553 ORTHO05D002767 9.9e-94 347.8 405 49.1
RcHm_v2.0_Chr3g0454111 Rosa chinensis HOM05D002553 ORTHO05D002767 1.3e-93 347.4 394 52.5
Gorai.004G243500 Gossypium raimondii HOM05D002553 ORTHO05D002767 1.7e-93 347.1 402 49.5
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 2.2e-93 346.7 414 48.6
FvH4_6g05341 Fragaria vesca HOM05D002553 ORTHO05D002767 1.1e-92 344.4 393 51.1
Gohir.D08G229300 Gossypium hirsutum HOM05D002553 ORTHO05D002767 1.1e-92 344.4 398 50.5
ECA238G2267 Erigeron canadensis HOM05D002553 ORTHO05D002767 1.9e-92 343.6 385 49.1
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.9e-92 343.6 396 50.8
Atru.chr2.474 Acer truncatum HOM05D002553 ORTHO05D002767 2.4e-92 343.2 384 51.3
Rhsim05G0144400 Rhododendron simsii HOM05D002553 ORTHO05D002767 4.2e-92 342.4 410 49.8
Haze_04234 Corylus avellana HOM05D002553 ORTHO05D002767 5.4e-92 342.0 397 50.6
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 9.3e-92 341.3 366 52.5
Sc09g0003350 Simmondsia chinensis HOM05D002553 ORTHO05D002767 9.3e-92 341.3 384 50.5
THA.LOC104818678 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 9.3e-92 341.3 370 51.9
PGR031G3980 Punica granatum HOM05D002553 ORTHO05D002767 1.2e-91 340.9 371 52.3
Psat3g010200 Pisum sativum HOM05D002553 ORTHO05D002767 1.6e-91 340.5 387 49.6
Lalb_Chr15g0077101 Lupinus albus HOM05D002553 ORTHO05D002767 2.1e-91 340.1 393 51.1
CANSAT25G3036 Cannabis sativa HOM05D002553 ORTHO05D002767 7.9e-91 338.2 366 52.7
DCAR_029434 Daucus carota HOM05D002553 ORTHO05D002767 1.8e-90 337.0 403 48.9
FAN05G4192 Fragaria x ananassa HOM05D002553 ORTHO05D002767 2.3e-90 336.7 387 51.7
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 8.7e-90 334.7 402 50.2
FAN05G5165 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.5e-89 334.0 387 50.6
arahy.Tifrunner.gnm1.ann1.NG2XET Arachis hypogaea HOM05D002553 ORTHO05D002767 2.1e-88 330.1 379 51.7
Thecc.05G308100 Theobroma cacao HOM05D002553 ORTHO05D002767 3.7e-88 329.3 412 48.3
Actinidia19805 Actinidia chinensis HOM05D002553 ORTHO05D002767 4.8e-88 328.9 406 50.0
AL6G39610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 6.2e-88 328.6 380 50.3
Phvul.006G093933 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 8.1e-88 328.2 396 48.7
Lj1g0019778 Lotus japonicus HOM05D002553 ORTHO05D002767 5.3e-87 325.5 393 47.8
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 6.9e-87 325.1 432 47.2
QL03p004484 Quercus lobata HOM05D002553 ORTHO05D002767 6.9e-87 325.1 463 45.4
Carub.0006s2514 Capsella rubella HOM05D002553 ORTHO05D002767 9.0e-87 324.7 380 50.0
Glyma.19G237200 Glycine max HOM05D002553 ORTHO05D002767 1.2e-86 324.3 396 49.2
Phvul.006G093922 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 1.5e-86 323.9 402 48.5
Oeu057684.1 Olea europaea HOM05D002553 ORTHO05D002767 3.4e-86 322.8 377 50.1
BcaNung04367 Brassica carinata HOM05D002553 ORTHO05D002767 7.6e-86 321.6 381 49.3
AT5G27400 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 1.3e-85 320.9 380 49.7
Lsat_1_v5_gn_2_67941 Lactuca sativa HOM05D002553 ORTHO05D002767 2.2e-85 320.1 349 50.4
arahy.Tifrunner.gnm1.ann1.Y4B2Z0 Arachis hypogaea HOM05D002553 ORTHO05D002767 3.8e-85 319.3 397 49.1
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 4.9e-85 318.9 358 51.7
AUR62000868 Chenopodium quinoa HOM05D002553 ORTHO05D002767 3.2e-84 316.2 387 45.7
CARHR186000 Cardamine hirsuta HOM05D002553 ORTHO05D002767 5.5e-84 315.5 379 49.1
BcaNung02464 Brassica carinata HOM05D002553 ORTHO05D002767 7.1e-84 315.1 368 50.3
Ca_09373_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 7.1e-84 315.1 384 47.9
Medtr7g113850 Medicago truncatula HOM05D002553 ORTHO05D002767 2.1e-83 313.5 380 49.2
VMungo0540G2049 Vigna mungo HOM05D002553 ORTHO05D002767 3.5e-83 312.8 395 47.8
Sabra05G0037600 Salix brachista HOM05D002553 ORTHO05D002767 3.0e-82 309.7 572 38.1
Aa31LG11G9180 Aethionema arabicum HOM05D002553 ORTHO05D002767 8.7e-82 308.1 383 47.5
TPR.G33193 Trifolium pratense HOM05D002553 ORTHO05D002767 8.7e-82 308.1 355 50.7
PSO832G1112 Papaver somniferum HOM05D002553 ORTHO05D002767 1.1e-81 307.8 406 47.3
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 1.5e-81 307.4 373 48.8
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 2.5e-81 306.6 362 49.7
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 2.5e-81 306.6 362 49.7
Sp2g20630 Schrenkiella parvula HOM05D002553 ORTHO05D002767 3.3e-81 306.2 372 48.4
PSO210G0829 Papaver somniferum HOM05D002553 ORTHO05D002767 1.3e-80 304.3 406 47.0
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 2.1e-80 303.5 376 48.7
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 2.1e-80 303.5 376 48.7
CDE08G1662 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 1.1e-79 301.2 367 48.8
Peaxi162Scf01441g00005 Petunia axillaris HOM05D002553 ORTHO05D002767 1.4e-79 300.8 498 41.0
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 6.9e-79 298.5 370 49.7
Aqoxy1G02454 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 1.2e-78 297.7 415 42.2
Cpa.g.sc48.13 Carica papaya HOM05D002553 ORTHO05D002767 1.5e-78 297.4 349 50.4
Prupe.6G330100 Prunus persica HOM05D002553 ORTHO05D002767 2.6e-78 296.6 345 50.7
Dinv40259 Davidia involucrata HOM05D002553 ORTHO05D002767 1.3e-77 294.3 274 58.8
COL.COLO4_13516 Corchorus olitorius HOM05D002553 ORTHO05D002767 8.4e-77 291.6 338 51.5
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 4.2e-76 289.3 406 45.8
Hma1.2p1_0666F.1_g199460 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 1.6e-75 287.3 282 57.1
unitig_32.g11004 Utricularia gibba HOM05D002553 ORTHO05D002767 5.1e-74 282.3 373 45.3
AUR62005108 Chenopodium quinoa HOM05D002553 ORTHO05D002767 2.5e-73 280.0 326 48.2
ATR0626G345 Amborella trichopoda HOM05D002553 ORTHO05D002767 3.3e-73 279.6 432 41.9
TAR633G1107 Trochodendron aralioides HOM05D002553 ORTHO05D002767 5.3e-71 272.3 366 45.9
HPP92_017205 Vanilla planifolia HOM05D002553 ORTHO05D002767 7.7e-70 268.5 364 45.1
Zm00001eb417780 Zea mays HOM05D002553 ORTHO05D002767 1.4e-68 264.2 372 43.8
Lj7C475G4 Lonicera japonica HOM05D002553 ORTHO05D002767 2.7e-67 260.0 372 44.6
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 1.0e-66 258.1 383 42.8
Gohir.A08G212300 Gossypium hirsutum HOM05D002553 ORTHO05D002767 4.1e-63 246.1 308 48.4
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 9.7e-57 224.9 393 38.4
Nn1g02088 Nelumbo nucifera HOM05D002553 ORTHO05D002767 5.3e-55 219.2 400 39.0
PGSC0003DMG400018888 Solanum tuberosum HOM05D002553 ORTHO05D002767 1.2e-54 218.0 414 38.6
Pp3c27_4830 Physcomitrium patens HOM05D002553 ORTHO05D002767 7.7e-54 215.3 389 37.3
Mapoly0153s0022 Marchantia polymorpha HOM05D002553 ORTHO05D002767 7.2e-44 182.2 393 32.8
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 2.7e-43 180.3 351 33.0
Sed0024851 Sechium edule HOM05D002553 ORTHO05D002767 2.4e-39 167.2 268 41.8
SalBow8G2918 Salvia bowleyana HOM05D002553 ORTHO05D002767 2.5e-36 157.1 177 52.5
vmacro19643 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 5.2e-34 149.4 197 46.2
Pp3c6_24550 Physcomitrium patens HOM05D002553 ORTHO05D002767 2.2e-32 144.1 325 35.4
vmacro19642 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 2.4e-31 140.6 227 41.9
CAN.G271.7 Capsicum annuum HOM05D002553 ORTHO05D002767 7.5e-25 119.0 101 55.4
AagrBONN_evm.TU.Sc2ySwM_368.1399 Anthoceros agrestis HOM05D002553 ORTHO05D002767 4.5e-22 109.8 190 34.7
CSS0010777 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 1.3e-21 108.2 95 60.0
CAN.G271.6 Capsicum annuum HOM05D000541 ORTHO05D000137 6.6e-21 105.9 137 46.0
CBR_g66786 Chara braunii HOM05D002553 ORTHO05D002767 2.0e-14 84.3 88 43.2
Glyma.03G240200 Glycine max HOM05D002553 ORTHO05D002767 1.3e-13 81.6 140 40.0
SEGI_18575 Sequoiadendron giganteum HOM05D002553 ORTHO05D002767 1.7e-13 81.3 131 42.0
CSS0028745 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 2.3e-10 70.9 113 44.2
Os05g0143200 Oryza sativa ssp. japonica HOM05D002553 ORTHO05D002767 8.9e-10 68.9 99 42.4
Thhalv10025786m.g Eutrema salsugineum HOM05D006469 ORTHO05D008034 7.0e-07 59.3 148 29.1
BraA01t00258Z Brassica rapa HOM05D006469 ORTHO05D008034 2.1e-06 57.8 149 28.2
BcaNung00773 Brassica carinata HOM05D006469 ORTHO05D008034 3.5e-06 57.0 149 28.2
C01p03020 Brassica napus HOM05D006469 ORTHO05D008034 3.5e-06 57.0 149 28.2
BolC1t00288H Brassica oleracea HOM05D006469 ORTHO05D008034 3.5e-06 57.0 149 28.2
MCO08G105 Micromonas commoda HOM05D002553 ORTHO05D002767 3.5e-06 57.0 97 32.0
A01p02720 Brassica napus HOM05D006469 ORTHO05D008034 4.6e-06 56.6 148 27.7
Sp7g33770 Schrenkiella parvula HOM05D006469 ORTHO05D008034 4.6e-06 56.6 148 28.4


User provided reference genes

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