Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00152 Striga asiatica HOM05D008090 ORTHO05D010156 8.9e-114 413.7 220 100.0
MSTRG.7470 Avicennia marina HOM05D008090 ORTHO05D010156 1.8e-50 203.4 234 50.9
Migut.M00932 Erythranthe guttata HOM05D008090 ORTHO05D010156 6.3e-43 178.3 238 50.4
Lj1P1184T52 Lonicera japonica HOM05D008090 ORTHO05D010156 1.2e-33 147.5 226 45.1
Dinv30710 Davidia involucrata HOM05D000133 ORTHO05D010156 2.7e-33 146.4 245 45.3
Cc09_g09530 Coffea canephora HOM05D008090 ORTHO05D010156 7.7e-33 144.8 241 42.7
CAN.G257.11 Capsicum annuum HOM05D008090 ORTHO05D010156 1.1e-31 141.0 229 42.8
Solyc02g070900.1 Solanum lycopersicum HOM05D008090 ORTHO05D010156 1.5e-31 140.6 235 41.7
Nitab4.5_0029367g0010 Nicotiana tabacum HOM05D008090 ORTHO05D010156 1.2e-30 137.5 237 40.5
Cfa000975 Carpinus fangiana HOM05D008090 ORTHO05D010156 8.0e-30 134.8 235 42.1
Sopen02g019980 Solanum pennellii HOM05D008090 ORTHO05D010156 8.0e-30 134.8 237 40.5
PGSC0003DMG400008320 Solanum tuberosum HOM05D008090 ORTHO05D010156 1.0e-29 134.4 237 40.5
Haze_05542 Corylus avellana HOM05D008090 ORTHO05D010156 2.3e-29 133.3 235 43.0
MBI07_g21779_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 5.2e-29 132.1 229 45.0
Sc17g0005080 Simmondsia chinensis HOM05D008090 ORTHO05D010156 1.2e-28 131.0 237 40.1
RcHm_v2.0_Chr5g0013301 Rosa chinensis HOM05D008090 ORTHO05D010156 7.5e-28 128.3 252 39.3
Manes.17G067400 Manihot esculenta HOM05D008090 ORTHO05D010156 2.2e-27 126.7 263 38.8
Lj2P974T32 Lonicera japonica HOM05D008090 ORTHO05D010156 4.9e-27 125.6 177 45.8
FAN16G3306 Fragaria x ananassa HOM05D008090 ORTHO05D010156 1.8e-26 123.6 247 38.9
FAN25G1154 Fragaria x ananassa HOM05D008090 ORTHO05D010156 1.8e-26 123.6 250 39.6
Prupe.4G076400 Prunus persica HOM05D008090 ORTHO05D010156 4.1e-26 122.5 249 40.2
RcHm_v2.0_Chr5g0013271 Rosa chinensis HOM05D008090 ORTHO05D010156 4.1e-26 122.5 251 37.5
TAR629G2487 Trochodendron aralioides HOM05D008090 ORTHO05D010156 4.1e-26 122.5 231 40.3
Lalb_Chr03g0037351 Lupinus albus HOM05D008090 ORTHO05D010156 5.4e-26 122.1 230 38.7
Nn3g17305 Nelumbo nucifera HOM05D008090 ORTHO05D010156 7.0e-26 121.7 242 38.0
AUR62035141 Chenopodium quinoa HOM05D008090 ORTHO05D010156 9.2e-26 121.3 236 40.7
Peaxi162Scf00347g00042 Petunia axillaris HOM05D008090 ORTHO05D010156 1.6e-25 120.6 226 41.2
Psat7g091840 Pisum sativum HOM05D008090 ORTHO05D010156 1.6e-25 120.6 235 38.3
QL05p059335 Quercus lobata HOM05D008090 ORTHO05D010156 1.6e-25 120.6 244 38.1
Hund17789 Selenicereus undatus HOM05D008090 ORTHO05D010156 1.6e-25 120.6 235 40.0
Lsat_1_v5_gn_4_30220 Lactuca sativa HOM05D008090 ORTHO05D010156 2.0e-25 120.2 227 41.9
CsaV3_1G032520 Cucumis sativus L. HOM05D008090 ORTHO05D010156 5.9e-25 118.6 229 38.0
MD05G1289100 Malus domestica HOM05D008090 ORTHO05D010156 1.0e-24 117.9 244 39.3
Phvul.002G196300 Phaseolus vulgaris HOM05D008090 ORTHO05D010156 1.0e-24 117.9 227 37.9
Gohir.D06G141600 Gossypium hirsutum HOM05D008090 ORTHO05D010156 1.3e-24 117.5 231 38.5
Gorai.010G165200 Gossypium raimondii HOM05D008090 ORTHO05D010156 1.3e-24 117.5 231 38.5
CANSAT35G0881 Cannabis sativa HOM05D008090 ORTHO05D010156 1.7e-24 117.1 240 37.9
TPR.G4884 Trifolium pratense HOM05D000133 ORTHO05D000259 1.7e-24 117.1 233 36.9
ClCG03G006940 Citrullus lanatus HOM05D008090 ORTHO05D010156 2.9e-24 116.3 229 38.4
Lj4g0014733 Lotus japonicus HOM05D008090 ORTHO05D010156 5.0e-24 115.5 254 35.8
MELO3C002726.2 Cucumis melo HOM05D008090 ORTHO05D010156 6.6e-24 115.2 234 38.5
FAN11G2783 Fragaria x ananassa HOM05D000133 ORTHO05D010156 6.6e-24 115.2 244 37.3
Oeu019949.1 Olea europaea HOM05D008090 ORTHO05D010156 8.6e-24 114.8 107 57.0
arahy.Tifrunner.gnm1.ann1.S5KLBV Arachis hypogaea HOM05D008090 ORTHO05D010156 1.9e-23 113.6 234 39.3
Potri.004G065500 Populus trichocarpa HOM05D008090 ORTHO05D010156 2.5e-23 113.2 249 38.6
Thecc.06G154700 Theobroma cacao HOM05D008090 ORTHO05D010156 2.5e-23 113.2 234 36.3
Sabra04G0043800 Salix brachista HOM05D008090 ORTHO05D010156 3.3e-23 112.8 243 39.5
arahy.Tifrunner.gnm1.ann1.548L12 Arachis hypogaea HOM05D008090 ORTHO05D010156 4.3e-23 112.5 234 38.5
Gohir.A06G136400 Gossypium hirsutum HOM05D008090 ORTHO05D010156 7.3e-23 111.7 231 37.7
Sed0014565 Sechium edule HOM05D008090 ORTHO05D010156 1.6e-22 110.5 231 40.7
EL10Ac4g09546 Beta vulgaris HOM05D008090 ORTHO05D010156 2.1e-22 110.2 237 38.0
TAR629G3101 Trochodendron aralioides HOM05D008090 ORTHO05D010156 2.1e-22 110.2 182 42.9
Glyma.05G128100 Glycine max HOM05D008090 ORTHO05D010156 6.1e-22 108.6 231 37.2
Rhsim13G0192500 Rhododendron simsii HOM05D008090 ORTHO05D010156 8.0e-22 108.2 238 42.4
ECA234G1353 Erigeron canadensis HOM05D008090 ORTHO05D010156 1.4e-21 107.5 233 38.2
FvH4_3g06110 Fragaria vesca HOM05D000133 ORTHO05D000259 3.0e-21 106.3 169 43.2
DCAR_003940 Daucus carota HOM05D000013 ORTHO05D010156 4.0e-21 105.9 155 42.6
Medtr4g094608 Medicago truncatula HOM05D008090 ORTHO05D010156 1.2e-20 104.4 226 34.5
COL.COLO4_06066 Corchorus olitorius HOM05D008090 ORTHO05D010156 2.2e-19 100.1 238 34.9
Ah.00g001040 Amaranthus hybridus HOM05D008090 ORTHO05D010156 4.9e-19 99.0 235 34.0
Ca_18277_v3 Cicer arietinum L. HOM05D000133 ORTHO05D000259 7.0e-18 95.1 173 41.6
Aqoxy4G00119 Aquilegia oxysepala HOM05D008090 ORTHO05D010156 1.2e-17 94.4 243 32.9
VMungo0251G0641 Vigna mungo HOM05D008090 ORTHO05D010156 1.3e-16 90.9 231 33.3
TWI09G1028 Tripterygium wilfordii HOM05D008090 ORTHO05D010156 1.7e-16 90.5 248 33.1
Nitab4.5_0006300g0040 Nicotiana tabacum HOM05D008090 ORTHO05D010156 8.6e-16 88.2 174 40.2
HanXRQChr17g0565011 Helianthus annuus HOM05D008090 ORTHO05D010156 1.5e-15 87.4 219 39.7
MBI19_g47931_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 1.2e-14 84.3 174 44.3
PGSC0003DMG400008321 Solanum tuberosum HOM05D008090 ORTHO05D010156 6.8e-13 78.6 80 55.0
Ciclev10027155m.g Citrus clementina HOM05D008090 ORTHO05D010156 2.5e-07 60.1 159 32.1
Sopen02g020000 Solanum pennellii HOM05D008090 ORTHO05D010156 3.6e-06 56.2 166 31.9


User provided reference genes

Program Settings