Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00137 Striga asiatica HOM05D002896 ORTHO05D406679 3.2e-144 515.0 251 100.0
TAR622G0791 Trochodendron aralioides HOM05D002896 ORTHO05D003263 1.6e-10 70.9 116 35.3
ATR1120G027 Amborella trichopoda HOM05D002896 ORTHO05D003263 2.1e-10 70.5 113 33.6
CiPaw.12G063500 Carya illinoinensis HOM05D002896 ORTHO05D003263 3.6e-10 69.7 139 33.1
Os06g0199500 Oryza sativa ssp. japonica HOM05D002896 ORTHO05D003263 3.6e-10 69.7 122 33.6
SGA_v2.0_scaffold122G33213 Striga asiatica HOM05D002896 ORTHO05D406173 3.6e-10 69.7 171 29.2
Lj5A100T67 Lonicera japonica HOM05D002896 ORTHO05D003263 4.7e-10 69.3 135 31.9
TPR.G19629 Trifolium pratense HOM05D002896 ORTHO05D003263 4.7e-10 69.3 112 33.0
Lj1g0020531 Lotus japonicus HOM05D002896 ORTHO05D003263 6.2e-10 68.9 112 33.0
Ca_23821_v3 Cicer arietinum L. HOM05D002896 ORTHO05D003263 8.0e-10 68.6 112 32.1
Ca_23826_v3 Cicer arietinum L. HOM05D002896 ORTHO05D003263 8.0e-10 68.6 112 32.1
CsaV3_1G000770 Cucumis sativus L. HOM05D002896 ORTHO05D003263 8.0e-10 68.6 112 33.0
Migut.C00391 Erythranthe guttata HOM05D002896 ORTHO05D003263 8.0e-10 68.6 112 33.0
Psat4g196200 Pisum sativum HOM05D002896 ORTHO05D003263 8.0e-10 68.6 139 30.9
Zm00001eb005060 Zea mays HOM05D002896 ORTHO05D003263 8.0e-10 68.6 119 33.6
arahy.Tifrunner.gnm1.ann1.A9DBCF Arachis hypogaea HOM05D002896 ORTHO05D003263 1.0e-09 68.2 120 35.0
Psat4g223920 Pisum sativum HOM05D002896 ORTHO05D003263 1.0e-09 68.2 112 33.0
Prupe.5G158000 Prunus persica HOM05D002896 ORTHO05D003263 1.0e-09 68.2 130 33.1
Sp3g16140 Schrenkiella parvula HOM05D002896 ORTHO05D003263 1.0e-09 68.2 116 33.6
Zm00001eb373930 Zea mays HOM05D002896 ORTHO05D003263 1.0e-09 68.2 119 33.6
Hma1.2p1_0046F.1_g027650 Hydrangea macrophylla HOM05D002896 ORTHO05D003263 1.4e-09 67.8 127 33.1
MELO3C026216.2 Cucumis melo HOM05D002896 ORTHO05D003263 1.8e-09 67.4 112 33.9
Duzib041G0791 Durio zibethinus HOM05D002896 ORTHO05D003263 1.8e-09 67.4 126 31.0
Glyma.18G223550 Glycine max HOM05D002896 ORTHO05D003263 1.8e-09 67.4 112 33.0
Medtr8g035610 Medicago truncatula HOM05D002896 ORTHO05D003263 1.8e-09 67.4 112 32.1
SGA_v2.0_scaffold118G32461 Striga asiatica HOM05D002896 ORTHO05D003263 1.8e-09 67.4 130 32.3
Cpa.g.sc4.63 Carica papaya HOM05D002896 ORTHO05D003263 2.3e-09 67.0 116 32.8
Cfa012436 Carpinus fangiana HOM05D002896 ORTHO05D003263 2.3e-09 67.0 139 31.7
Migut.N00872 Erythranthe guttata HOM05D002896 ORTHO05D003263 2.3e-09 67.0 112 34.8
Thecc.08G026400 Theobroma cacao HOM05D002896 ORTHO05D003263 2.3e-09 67.0 116 34.5
TWI63G1061 Tripterygium wilfordii HOM05D002896 ORTHO05D003263 2.3e-09 67.0 131 31.3
MBI14_g44928_MAGBIO Magnolia biondii HOM05D002896 ORTHO05D003263 3.1e-09 66.6 135 29.6
SHI04274 Sapria himalayana HOM05D002896 ORTHO05D003263 3.1e-09 66.6 116 33.6
SMO134G0228 Selaginella moellendorffii HOM05D002896 ORTHO05D003263 3.1e-09 66.6 116 33.6
THA.LOC104820352 Tarenaya hassleriana HOM05D002896 ORTHO05D003263 3.1e-09 66.6 116 32.8
BcaB06g25870 Brassica carinata HOM05D002896 ORTHO05D003263 4.0e-09 66.2 129 32.6
CAN.G774.4 Capsicum annuum HOM05D002896 ORTHO05D003263 4.0e-09 66.2 131 30.5
CARHR093340 Cardamine hirsuta HOM05D002896 ORTHO05D003263 4.0e-09 66.2 138 30.4
Peaxi162Scf00119g00619 Petunia axillaris HOM05D002896 ORTHO05D003263 4.0e-09 66.2 111 33.3
Sc04g0001010 Simmondsia chinensis HOM05D002896 ORTHO05D003263 4.0e-09 66.2 112 33.0
Solyc08g080920.3 Solanum lycopersicum HOM05D002896 ORTHO05D003263 4.0e-09 66.2 116 31.9
Sopen08g029230 Solanum pennellii HOM05D002896 ORTHO05D003263 4.0e-09 66.2 116 31.9
Actinidia36784 Actinidia chinensis HOM05D002896 ORTHO05D003263 5.2e-09 65.9 116 32.8
Aa31LG8G4880 Aethionema arabicum HOM05D002896 ORTHO05D003263 5.2e-09 65.9 116 32.8
Ah.10g026630 Amaranthus hybridus HOM05D002896 ORTHO05D003263 5.2e-09 65.9 116 31.0
AT3G18030 Arabidopsis thaliana HOM05D002896 ORTHO05D003263 5.2e-09 65.9 125 32.0
Carub.0003s1774 Capsella rubella HOM05D002896 ORTHO05D003263 5.2e-09 65.9 138 29.7
Ciclev10022229m.g Citrus clementina HOM05D002896 ORTHO05D003263 5.2e-09 65.9 116 32.8
Cc05_g01460 Coffea canephora HOM05D002896 ORTHO05D003263 5.2e-09 65.9 130 28.5
Dinv11112 Davidia involucrata HOM05D002896 ORTHO05D003263 5.2e-09 65.9 143 31.5
Glyma.07G082800 Glycine max HOM05D002896 ORTHO05D003263 5.2e-09 65.9 112 32.1
Lalb_Chr13g0291641 Lupinus albus HOM05D002896 ORTHO05D003263 5.2e-09 65.9 112 31.2
Manes.06G064800 Manihot esculenta HOM05D002896 ORTHO05D003263 5.2e-09 65.9 112 34.8
Hund06571 Selenicereus undatus HOM05D002896 ORTHO05D003263 5.2e-09 65.9 116 31.9
Solyc12g056270.2 Solanum lycopersicum HOM05D002896 ORTHO05D003263 5.2e-09 65.9 120 32.5
Atru.chr9.1000 Acer truncatum HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 31.9
BcaC01g03713 Brassica carinata HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 31.0
A05p31770 Brassica napus HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 32.8
C03p49340 Brassica napus HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 31.0
BolC3t17225H Brassica oleracea HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 31.0
BraA05t22009Z Brassica rapa HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 32.8
FvH4_5g07250 Fragaria vesca HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 32.8
FAN13G3304 Fragaria x ananassa HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 32.8
Nitab4.5_0015143g0010 Nicotiana tabacum HOM05D002896 ORTHO05D003263 6.8e-09 65.5 127 31.5
QL10p005413 Quercus lobata HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 32.8
TAR374G1192 Trochodendron aralioides HOM05D002896 ORTHO05D003263 6.8e-09 65.5 116 32.8
AL3G31180 Arabidopsis lyrata HOM05D002896 ORTHO05D003263 8.9e-09 65.1 116 31.9
Eucgr.K01291 Eucalyptus grandis HOM05D002896 ORTHO05D003263 8.9e-09 65.1 112 32.1
FAN18G1762 Fragaria x ananassa HOM05D002896 ORTHO05D003263 8.9e-09 65.1 116 32.8
Glyma.03G020900 Glycine max HOM05D002896 ORTHO05D003263 8.9e-09 65.1 112 32.1
Manes.14G106900 Manihot esculenta HOM05D002896 ORTHO05D003263 8.9e-09 65.1 116 32.8
Potri.015G089600 Populus trichocarpa HOM05D002896 ORTHO05D003263 8.9e-09 65.1 116 32.8
Rhsim12G0171600 Rhododendron simsii HOM05D002896 ORTHO05D003263 8.9e-09 65.1 111 34.2
RcHm_v2.0_Chr7g0191381 Rosa chinensis HOM05D002896 ORTHO05D003263 8.9e-09 65.1 116 32.8
TWI39G0772 Tripterygium wilfordii HOM05D002896 ORTHO05D003263 8.9e-09 65.1 112 33.0
GSVIVG01007555001 Vitis vinifera HOM05D002896 ORTHO05D003263 8.9e-09 65.1 112 33.9
arahy.Tifrunner.gnm1.ann1.LP7NGD Arachis hypogaea HOM05D002896 ORTHO05D003263 1.2e-08 64.7 112 31.2
arahy.Tifrunner.gnm1.ann1.M733BB Arachis hypogaea HOM05D002896 ORTHO05D003263 1.2e-08 64.7 112 31.2
arahy.Tifrunner.gnm1.ann1.RN9C70 Arachis hypogaea HOM05D002896 ORTHO05D003263 1.2e-08 64.7 120 35.0
BcaB04g20800 Brassica carinata HOM05D002896 ORTHO05D003263 1.2e-08 64.7 112 33.0
CSS0017851 Camellia sinensis var. sinensis HOM05D002896 ORTHO05D003263 1.2e-08 64.7 115 33.0
CARHR038210 Cardamine hirsuta HOM05D002896 ORTHO05D003263 1.2e-08 64.7 116 31.9
Thhalv10021520m.g Eutrema salsugineum HOM05D002896 ORTHO05D003263 1.2e-08 64.7 116 31.9
FAN04G0027 Fragaria x ananassa HOM05D002896 ORTHO05D003263 1.2e-08 64.7 116 32.8
Manes.06G064700 Manihot esculenta HOM05D002896 ORTHO05D003263 1.2e-08 64.7 130 30.8
Sabra15G0112000 Salix brachista HOM05D002896 ORTHO05D003263 1.2e-08 64.7 116 32.8
unitig_82.g27137 Utricularia gibba HOM05D002896 ORTHO05D003263 1.2e-08 64.7 116 32.8
vmacro16704 Vaccinium macrocarpon HOM05D002896 ORTHO05D003263 1.2e-08 64.7 170 29.4
Aqoxy2G02471 Aquilegia oxysepala HOM05D002896 ORTHO05D003263 1.5e-08 64.3 115 32.2
Aqoxy3G03446 Aquilegia oxysepala HOM05D002896 ORTHO05D003263 1.5e-08 64.3 112 33.0
Aqoxy3G03447 Aquilegia oxysepala HOM05D002896 ORTHO05D003263 1.5e-08 64.3 112 33.0
arahy.Tifrunner.gnm1.ann1.EPGX33 Arachis hypogaea HOM05D002896 ORTHO05D003263 1.5e-08 64.3 112 31.2
A01p36420 Brassica napus HOM05D002896 ORTHO05D003263 1.5e-08 64.3 112 32.1
BraA01t03707Z Brassica rapa HOM05D002896 ORTHO05D003263 1.5e-08 64.3 112 32.1
ClCG06G017690 Citrullus lanatus HOM05D002896 ORTHO05D003263 1.5e-08 64.3 115 32.2
arahy.Tifrunner.gnm1.ann1.67MFWE Arachis hypogaea HOM05D002896 ORTHO05D003263 2.0e-08 63.9 112 31.2
BcaC09g48762 Brassica carinata HOM05D002896 ORTHO05D003263 2.0e-08 63.9 112 32.1
C01p46170 Brassica napus HOM05D002896 ORTHO05D003263 2.0e-08 63.9 112 32.1
BolC1t04579H Brassica oleracea HOM05D002896 ORTHO05D003263 2.0e-08 63.9 112 32.1
CiPaw.11G092900 Carya illinoinensis HOM05D002896 ORTHO05D003263 2.0e-08 63.9 112 32.1
Migut.C01237 Erythranthe guttata HOM05D002896 ORTHO05D003263 2.0e-08 63.9 112 32.1
Nitab4.5_0000580g0010 Nicotiana tabacum HOM05D002896 ORTHO05D003263 2.0e-08 63.9 112 32.1
Oeu030585.1 Olea europaea HOM05D002896 ORTHO05D003263 2.0e-08 63.9 112 32.1
ATR1120G133 Amborella trichopoda HOM05D002896 ORTHO05D003263 2.6e-08 63.5 115 28.7
BcaC05g28724 Brassica carinata HOM05D002896 ORTHO05D003263 2.6e-08 63.5 116 31.9
BolC5t33561H Brassica oleracea HOM05D002896 ORTHO05D003263 2.6e-08 63.5 116 31.9
Sed0022612 Sechium edule HOM05D002896 ORTHO05D003263 2.6e-08 63.5 115 33.0
Sopen12g028790 Solanum pennellii HOM05D002896 ORTHO05D003263 2.6e-08 63.5 120 31.7
vmacro22315 Vaccinium macrocarpon HOM05D002896 ORTHO05D003263 2.6e-08 63.5 127 32.3
Aa31LG7G2850 Aethionema arabicum HOM05D002896 ORTHO05D003263 3.4e-08 63.2 180 25.0
ATR1120G083 Amborella trichopoda HOM05D002896 ORTHO05D003263 3.4e-08 63.2 115 29.6
AL1G55260 Arabidopsis lyrata HOM05D002896 ORTHO05D003263 3.4e-08 63.2 116 30.2
AT1G48605 Arabidopsis thaliana HOM05D002896 ORTHO05D003263 3.4e-08 63.2 116 29.3
EL10Ac1g00873 Beta vulgaris HOM05D002896 ORTHO05D003263 3.4e-08 63.2 131 30.5
BcaC01g03715 Brassica carinata HOM05D002896 ORTHO05D003263 3.4e-08 63.2 129 27.9
A03p40500 Brassica napus HOM05D002896 ORTHO05D003263 3.4e-08 63.2 129 28.7
BraA03t13209Z Brassica rapa HOM05D002896 ORTHO05D003263 3.4e-08 63.2 129 28.7
COL.COLO4_26320 Corchorus olitorius HOM05D002896 ORTHO05D003263 3.4e-08 63.2 122 31.1
Glyma.18G223700 Glycine max HOM05D002896 ORTHO05D003263 3.4e-08 63.2 123 31.7
HanXRQChr04g0100751 Helianthus annuus HOM05D002896 ORTHO05D003263 3.4e-08 63.2 142 30.3
PGR031G0115 Punica granatum HOM05D002896 ORTHO05D003263 3.4e-08 63.2 119 33.6
Rhsim04G0164200 Rhododendron simsii HOM05D002896 ORTHO05D003263 3.4e-08 63.2 111 33.3
Sp1g35570 Schrenkiella parvula HOM05D002896 ORTHO05D003263 3.4e-08 63.2 116 30.2
unitig_46.g18023 Utricularia gibba HOM05D002896 ORTHO05D003263 3.4e-08 63.2 112 32.1
unitig_748.g7744 Utricularia gibba HOM05D002896 ORTHO05D003263 3.4e-08 63.2 110 33.6
VMungo0331G1155 Vigna mungo HOM05D002896 ORTHO05D003263 3.4e-08 63.2 112 31.2
AUR62011542 Chenopodium quinoa HOM05D002896 ORTHO05D003263 4.4e-08 62.8 116 31.9
AUR62016361 Chenopodium quinoa HOM05D002896 ORTHO05D003263 4.4e-08 62.8 116 31.9
MD14G1164500 Malus domestica HOM05D002896 ORTHO05D003263 4.4e-08 62.8 169 27.8
PSO339G3213 Papaver somniferum HOM05D002896 ORTHO05D003263 4.4e-08 62.8 123 30.9
Phvul.008G074500 Phaseolus vulgaris HOM05D002896 ORTHO05D003263 4.4e-08 62.8 116 30.2
Phvul.010G086000 Phaseolus vulgaris HOM05D002896 ORTHO05D003263 4.4e-08 62.8 112 31.2
Cc06_g20670 Coffea canephora HOM05D002896 ORTHO05D003263 5.8e-08 62.4 116 29.3
DCAR_016748 Daucus carota HOM05D002896 ORTHO05D003263 5.8e-08 62.4 116 32.8
Gohir.D05G197400 Gossypium hirsutum HOM05D002896 ORTHO05D003263 5.8e-08 62.4 120 32.5
Gorai.009G202300 Gossypium raimondii HOM05D002896 ORTHO05D003263 5.8e-08 62.4 120 32.5
MD06G1157900 Malus domestica HOM05D002896 ORTHO05D003263 5.8e-08 62.4 149 28.2
Glyma.18G223400 Glycine max HOM05D002896 ORTHO05D003263 7.5e-08 62.0 116 30.2
PGSC0003DMG400004975 Solanum tuberosum HOM05D002896 ORTHO05D003263 7.5e-08 62.0 112 32.1
VMungo1383G0995 Vigna mungo HOM05D002896 ORTHO05D003263 7.5e-08 62.0 112 30.4
Cpa.g.sc36.74 Carica papaya HOM05D002896 ORTHO05D003263 9.8e-08 61.6 110 30.9
Duzib116G0381 Durio zibethinus HOM05D002896 ORTHO05D003263 9.8e-08 61.6 116 31.0
HanXRQChr02g0035121 Helianthus annuus HOM05D002896 ORTHO05D003263 9.8e-08 61.6 114 32.5
arahy.Tifrunner.gnm1.ann1.2J6PAY Arachis hypogaea HOM05D002896 ORTHO05D003263 1.3e-07 61.2 124 31.5
DCAR_021602 Daucus carota HOM05D002896 ORTHO05D003263 1.3e-07 61.2 116 31.9
Gohir.D06G007700 Gossypium hirsutum HOM05D002896 ORTHO05D003263 1.3e-07 61.2 122 30.3
Lsat_1_v5_gn_5_13160 Lactuca sativa HOM05D002896 ORTHO05D003263 1.3e-07 61.2 114 31.6
PSO063G0222 Papaver somniferum HOM05D002896 ORTHO05D003263 1.3e-07 61.2 116 31.0
PSO782G5438 Papaver somniferum HOM05D002896 ORTHO05D003263 1.3e-07 61.2 116 31.0
RcHm_v2.0_Chr3g0460241 Rosa chinensis HOM05D002896 ORTHO05D003263 1.3e-07 61.2 120 30.8
Sed0003126 Sechium edule HOM05D002896 ORTHO05D003263 1.3e-07 61.2 118 33.1
THA.LOC104812168 Tarenaya hassleriana HOM05D002896 ORTHO05D003263 1.3e-07 61.2 133 27.8
ClCG03G003440 Citrullus lanatus HOM05D002896 ORTHO05D003263 1.7e-07 60.8 118 33.1
Gorai.010G010400 Gossypium raimondii HOM05D002896 ORTHO05D003263 1.7e-07 60.8 122 30.3
Hund00541 Selenicereus undatus HOM05D002896 ORTHO05D003263 1.7e-07 60.8 112 28.6
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 2.2e-07 60.5 130 30.0
Medtr7g075760 Medicago truncatula HOM05D002896 ORTHO05D003263 2.2e-07 60.5 121 29.8
Medtr7g076050 Medicago truncatula HOM05D002896 ORTHO05D003263 2.2e-07 60.5 121 29.8
CsaV3_1G009240 Cucumis sativus L. HOM05D002896 ORTHO05D003263 2.9e-07 60.1 116 32.8
ECA247G2468 Erigeron canadensis HOM05D002896 ORTHO05D003263 2.9e-07 60.1 112 31.2
Lsat_1_v5_gn_1_28461 Lactuca sativa HOM05D002896 ORTHO05D003263 2.9e-07 60.1 112 31.2
Lj1g0011280 Lotus japonicus HOM05D002896 ORTHO05D003263 2.9e-07 60.1 130 27.7
MD14G1015700 Malus domestica HOM05D002896 ORTHO05D003263 2.9e-07 60.1 116 29.3
Nitab4.5_0000360g0150 Nicotiana tabacum HOM05D002896 ORTHO05D003263 2.9e-07 60.1 112 30.4
AagrBONN_evm.TU.Sc2ySwM_117.2391 Anthoceros agrestis HOM05D002896 ORTHO05D003263 4.9e-07 59.3 112 30.4
AagrBONN_evm.TU.Sc2ySwM_344.682 Anthoceros agrestis HOM05D002896 ORTHO05D003263 4.9e-07 59.3 119 31.9
Gohir.A05G194200 Gossypium hirsutum HOM05D002896 ORTHO05D003263 4.9e-07 59.3 120 31.7
Pp3c13_11510 Physcomitrium patens HOM05D002896 ORTHO05D003263 4.9e-07 59.3 112 32.1
PRCOL_00001775 Prasinoderma coloniale HOM05D002896 ORTHO05D003263 6.4e-07 58.9 142 29.6
CDE09G0352 Ceratophyllum demersum HOM05D002896 ORTHO05D003263 8.3e-07 58.5 130 27.7
SalBow6G3718 Salvia bowleyana HOM05D002896 ORTHO05D003263 8.3e-07 58.5 108 33.3
arahy.Tifrunner.gnm1.ann1.L5RF1Z Arachis hypogaea HOM05D002896 ORTHO05D003263 1.4e-06 57.8 132 31.8
Lalb_Chr01g0021271 Lupinus albus HOM05D002896 ORTHO05D003263 1.9e-06 57.4 116 31.9
Ca_07838_v3 Cicer arietinum L. HOM05D002896 ORTHO05D003263 2.4e-06 57.0 137 28.5
Gohir.A06G010300 Gossypium hirsutum HOM05D002896 ORTHO05D003263 2.4e-06 57.0 123 30.1
CBR_g28078 Chara braunii HOM05D002896 ORTHO05D003263 3.2e-06 56.6 111 31.5
arahy.Tifrunner.gnm1.ann1.B6R500 Arachis hypogaea HOM05D002896 ORTHO05D003263 5.4e-06 55.8 127 29.1
arahy.Tifrunner.gnm1.ann1.ZCQ994 Arachis hypogaea HOM05D002896 ORTHO05D003263 5.4e-06 55.8 123 30.1
Medtr7g076070 Medicago truncatula HOM05D002896 ORTHO05D003263 5.4e-06 55.8 129 30.2
Pp3c4_31830 Physcomitrium patens HOM05D002896 ORTHO05D003263 5.4e-06 55.8 112 29.5
arahy.Tifrunner.gnm1.ann1.3XM56G Arachis hypogaea HOM05D002896 ORTHO05D003263 9.2e-06 55.1 116 30.2


User provided reference genes

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