Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00085 Striga asiatica HOM05D005059 ORTHO05D004248 4.4e-47 191.0 103 100.0
SalBow7G3765 Salvia bowleyana HOM05D005059 ORTHO05D004248 3.1e-16 88.6 103 51.5
Oeu060173.1 Olea europaea HOM05D005059 ORTHO05D004248 1.2e-15 86.7 103 48.5
CAN.G411.50 Capsicum annuum HOM05D005059 ORTHO05D004248 4.4e-15 84.7 95 48.4
Sopen02g021130 Solanum pennellii HOM05D005059 ORTHO05D004248 5.8e-15 84.3 92 48.9
Cc02_g15600 Coffea canephora HOM05D005059 ORTHO05D004248 2.2e-14 82.4 103 44.7
MSTRG.13233 Avicennia marina HOM05D005059 ORTHO05D004248 3.8e-14 81.6 104 48.1
Haze_06169 Corylus avellana HOM05D005059 ORTHO05D004248 6.4e-14 80.9 90 47.8
Lsat_1_v5_gn_7_25601 Lactuca sativa HOM05D005059 ORTHO05D004248 6.4e-14 80.9 96 50.0
Migut.H01411 Erythranthe guttata HOM05D005059 ORTHO05D004248 8.4e-14 80.5 103 41.7
CiPaw.09G073100 Carya illinoinensis HOM05D005059 ORTHO05D004248 1.4e-13 79.7 98 48.0
Hma1.2p1_0113F.1_g055120 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 1.4e-13 79.7 95 47.4
Cfa000656 Carpinus fangiana HOM05D005059 ORTHO05D004248 1.9e-13 79.3 92 48.9
Oeu060178.1 Olea europaea HOM05D005059 ORTHO05D004248 3.2e-13 78.6 102 44.1
QL05p049931 Quercus lobata HOM05D005059 ORTHO05D004248 3.2e-13 78.6 94 46.8
SalBow8G0022 Salvia bowleyana HOM05D005059 ORTHO05D004248 3.2e-13 78.6 55 70.9
PGSC0003DMG400028485 Solanum tuberosum HOM05D005059 ORTHO05D004248 3.2e-13 78.6 104 46.2
Oeu043118.1 Olea europaea HOM05D005059 ORTHO05D004248 9.3e-13 77.0 103 47.6
Psat1g194640 Pisum sativum HOM05D005059 ORTHO05D004248 9.3e-13 77.0 96 45.8
TAR626G0600 Trochodendron aralioides HOM05D005059 ORTHO05D004248 1.2e-12 76.6 103 44.7
Phvul.002G241108 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 1.6e-12 76.3 96 43.8
COL.COLO4_31233 Corchorus olitorius HOM05D005059 ORTHO05D004248 2.1e-12 75.9 99 47.5
FAN11G2282 Fragaria x ananassa HOM05D005059 ORTHO05D004248 2.7e-12 75.5 99 48.5
Glyma.08G118500 Glycine max HOM05D005059 ORTHO05D004248 2.7e-12 75.5 96 44.8
Oeu040922.1 Olea europaea HOM05D005059 ORTHO05D004248 2.7e-12 75.5 95 49.5
Dinv32337 Davidia involucrata HOM05D005059 ORTHO05D004248 4.6e-12 74.7 89 47.2
CSS0038855 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 6.0e-12 74.3 97 41.2
DCAR_027980 Daucus carota HOM05D005059 ORTHO05D004248 6.0e-12 74.3 103 45.6
Potri.004G061300 Populus trichocarpa HOM05D005059 ORTHO05D004248 6.0e-12 74.3 100 43.0
Eucgr.D00466 Eucalyptus grandis HOM05D005059 ORTHO05D004248 7.8e-12 73.9 97 45.4
Sabra04G0040600 Salix brachista HOM05D005059 ORTHO05D004248 7.8e-12 73.9 98 43.9
Glyma.13G226600 Glycine max HOM05D005059 ORTHO05D004248 1.0e-11 73.6 93 44.1
MSTRG.7430 Avicennia marina HOM05D005059 ORTHO05D004248 1.3e-11 73.2 104 45.2
Glyma.05G161100 Glycine max HOM05D005059 ORTHO05D004248 1.3e-11 73.2 87 46.0
Nn6g34461 Nelumbo nucifera HOM05D005059 ORTHO05D004248 3.0e-11 72.0 99 46.5
TPR.G6728 Trifolium pratense HOM05D005059 ORTHO05D004248 3.0e-11 72.0 104 45.2
FvH4_3g07300 Fragaria vesca HOM05D005059 ORTHO05D004248 3.9e-11 71.6 99 47.5
Thecc.06G165400 Theobroma cacao HOM05D005059 ORTHO05D004248 3.9e-11 71.6 95 42.1
Manes.16G042800 Manihot esculenta HOM05D005059 ORTHO05D004248 5.1e-11 71.2 92 42.4
Medtr2g016800 Medicago truncatula HOM05D005059 ORTHO05D004248 5.1e-11 71.2 99 43.4
Psat7g068640 Pisum sativum HOM05D005059 ORTHO05D004248 6.6e-11 70.9 105 43.8
DCAR_005145 Daucus carota HOM05D005059 ORTHO05D004248 8.7e-11 70.5 92 46.7
Gohir.A05G153400 Gossypium hirsutum HOM05D005059 ORTHO05D004248 8.7e-11 70.5 97 45.4
Lalb_Chr15g0086331 Lupinus albus HOM05D005059 ORTHO05D004248 8.7e-11 70.5 56 60.7
Potri.011G070500 Populus trichocarpa HOM05D005059 ORTHO05D004248 1.1e-10 70.1 98 40.8
RcHm_v2.0_Chr5g0011661 Rosa chinensis HOM05D005059 ORTHO05D004248 1.9e-10 69.3 99 44.4
TWI53G1149 Tripterygium wilfordii HOM05D005059 ORTHO05D004248 1.9e-10 69.3 94 46.8
FAN16G0464 Fragaria x ananassa HOM05D005059 ORTHO05D004248 2.5e-10 68.9 104 44.2
arahy.Tifrunner.gnm1.ann1.YNVN02 Arachis hypogaea HOM05D005059 ORTHO05D004248 3.3e-10 68.6 97 41.2
Medtr8g087390 Medicago truncatula HOM05D005059 ORTHO05D004248 3.3e-10 68.6 93 43.0
TAR624G0872 Trochodendron aralioides HOM05D005059 ORTHO05D004248 3.3e-10 68.6 103 39.8
FAN21G0043 Fragaria x ananassa HOM05D005059 ORTHO05D004248 4.3e-10 68.2 99 45.5
Gohir.D05G156000 Gossypium hirsutum HOM05D005059 ORTHO05D004248 4.3e-10 68.2 97 44.3
Gorai.009G160500 Gossypium raimondii HOM05D005059 ORTHO05D004248 4.3e-10 68.2 97 44.3
Prupe.4G067000 Prunus persica HOM05D005059 ORTHO05D004248 4.3e-10 68.2 99 42.4
CSS0000215 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 5.6e-10 67.8 106 42.5
MD00G1009200 Malus domestica HOM05D005059 ORTHO05D004248 5.6e-10 67.8 101 41.6
MD00G1221100 Malus domestica HOM05D005059 ORTHO05D004248 5.6e-10 67.8 101 41.6
Lj6g0009726 Lotus japonicus HOM05D005059 ORTHO05D004248 7.3e-10 67.4 102 43.1
BcaB03g13892 Brassica carinata HOM05D005059 ORTHO05D004248 9.6e-10 67.0 103 39.8
Dinv12752 Davidia involucrata HOM05D005059 ORTHO05D004248 9.6e-10 67.0 51 62.7
arahy.Tifrunner.gnm1.ann1.YXRF57 Arachis hypogaea HOM05D005059 ORTHO05D004248 1.3e-09 66.6 97 41.2
A07p10740 Brassica napus HOM05D005059 ORTHO05D004248 1.3e-09 66.6 103 39.8
BraA07t28869Z Brassica rapa HOM05D005059 ORTHO05D004248 1.3e-09 66.6 103 39.8
FAN25G1124 Fragaria x ananassa HOM05D005059 ORTHO05D004248 1.3e-09 66.6 99 44.4
MD10G1275500 Malus domestica HOM05D005059 ORTHO05D004248 1.6e-09 66.2 95 44.2
Manes.17G059300 Manihot esculenta HOM05D005059 ORTHO05D004248 1.6e-09 66.2 104 37.5
Sp1g25220 Schrenkiella parvula HOM05D005059 ORTHO05D004248 2.1e-09 65.9 109 38.5
TAR627G0439 Trochodendron aralioides HOM05D005059 ORTHO05D004248 2.1e-09 65.9 98 37.8
CARHR028610 Cardamine hirsuta HOM05D005059 ORTHO05D004248 2.8e-09 65.5 103 39.8
Nn3g21078 Nelumbo nucifera HOM05D005059 ORTHO05D004248 2.8e-09 65.5 101 40.6
PGR042G3020 Punica granatum HOM05D005059 ORTHO05D004248 2.8e-09 65.5 100 42.0
AT1G29290 Arabidopsis thaliana HOM05D005059 ORTHO05D004248 3.6e-09 65.1 104 41.3
Ciclev10018148m.g Citrus clementina HOM05D005059 ORTHO05D004248 3.6e-09 65.1 93 44.1
Lj4g0014521 Lotus japonicus HOM05D005059 ORTHO05D004248 4.8e-09 64.7 93 43.0
Sabra11G0055200 Salix brachista HOM05D005059 ORTHO05D004248 4.8e-09 64.7 95 35.8
AL1G43080 Arabidopsis lyrata HOM05D005059 ORTHO05D004248 6.2e-09 64.3 104 42.3
BcaB03g12151 Brassica carinata HOM05D005059 ORTHO05D004248 6.2e-09 64.3 104 39.4
Ca_00473_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 6.2e-09 64.3 95 42.1
BcaC05g26955 Brassica carinata HOM05D005059 ORTHO05D004248 1.1e-08 63.5 92 39.1
C05p28050 Brassica napus HOM05D005059 ORTHO05D004248 1.1e-08 63.5 92 39.1
BolC5t31533H Brassica oleracea HOM05D005059 ORTHO05D004248 1.1e-08 63.5 92 39.1
Phvul.006G173000 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 1.1e-08 63.5 94 42.6
Rhsim13G0187800 Rhododendron simsii HOM05D005059 ORTHO05D004248 1.1e-08 63.5 95 38.9
BcaB07g32517 Brassica carinata HOM05D005059 ORTHO05D004248 1.4e-08 63.2 98 37.8
Atru.chr10.1568 Acer truncatum HOM05D005059 ORTHO05D004248 1.8e-08 62.8 89 41.6
A09p37060 Brassica napus HOM05D005059 ORTHO05D004248 1.8e-08 62.8 100 39.0
BraA09t39221Z Brassica rapa HOM05D005059 ORTHO05D004248 1.8e-08 62.8 100 39.0
TAR624G0770 Trochodendron aralioides HOM05D005059 ORTHO05D004248 1.8e-08 62.8 54 51.9
Ca_17896_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 2.4e-08 62.4 104 40.4
THA.LOC104820608 Tarenaya hassleriana HOM05D005059 ORTHO05D004248 2.4e-08 62.4 54 59.3
BcaC06g35423 Brassica carinata HOM05D005059 ORTHO05D004248 3.1e-08 62.0 104 39.4
C07p16340 Brassica napus HOM05D005059 ORTHO05D004248 3.1e-08 62.0 104 39.4
BolC7t42128H Brassica oleracea HOM05D005059 ORTHO05D004248 3.1e-08 62.0 104 39.4
Sed0013946 Sechium edule HOM05D005059 ORTHO05D004248 3.1e-08 62.0 54 61.1
Glyma.15G085800 Glycine max HOM05D005059 ORTHO05D004248 6.9e-08 60.8 93 41.9
Migut.M01008 Erythranthe guttata HOM05D005059 ORTHO05D004248 9.0e-08 60.5 95 41.1
Thhalv10009585m.g Eutrema salsugineum HOM05D005059 ORTHO05D004248 9.0e-08 60.5 103 35.9
MBI06_g16696_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 9.0e-08 60.5 95 36.8
BcaC01g00093 Brassica carinata HOM05D005059 ORTHO05D004248 2.0e-07 59.3 103 38.8
C03p75700 Brassica napus HOM05D005059 ORTHO05D004248 2.0e-07 59.3 103 38.8
BolC3t19830H Brassica oleracea HOM05D005059 ORTHO05D004248 2.0e-07 59.3 103 38.8
A08p25180 Brassica napus HOM05D005059 ORTHO05D004248 2.6e-07 58.9 103 38.8
BraA08t34472Z Brassica rapa HOM05D005059 ORTHO05D004248 2.6e-07 58.9 103 38.8
CiPaw.10G061800 Carya illinoinensis HOM05D005059 ORTHO05D004248 2.6e-07 58.9 104 40.4
Lalb_Chr18g0054771 Lupinus albus HOM05D005059 ORTHO05D004248 3.4e-07 58.5 73 43.8
Aqoxy4G00224 Aquilegia oxysepala HOM05D005059 ORTHO05D004248 4.5e-07 58.2 53 50.9
Carub.0001s2751 Capsella rubella HOM05D005059 ORTHO05D004248 4.5e-07 58.2 106 42.5
DCAR_027979 Daucus carota HOM05D005059 ORTHO05D004248 4.5e-07 58.2 54 51.9
Gorai.010G161500 Gossypium raimondii HOM05D005059 ORTHO05D004248 4.5e-07 58.2 98 39.8
TPR.G4530 Trifolium pratense HOM05D005059 ORTHO05D004248 4.5e-07 58.2 54 51.9
Gohir.A06G133800 Gossypium hirsutum HOM05D005059 ORTHO05D004248 1.7e-06 56.2 97 38.1
Gohir.D06G138900 Gossypium hirsutum HOM05D005059 ORTHO05D004248 1.7e-06 56.2 98 39.8
ClCG01G023900 Citrullus lanatus HOM05D005059 ORTHO05D004248 2.2e-06 55.8 54 55.6
CSS0004272 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 4.9e-06 54.7 104 36.5
Dinv18371 Davidia involucrata HOM05D000126 ORTHO05D000085 4.9e-06 54.7 102 35.3
AUR62039479 Chenopodium quinoa HOM05D005059 ORTHO05D004248 8.4e-06 53.9 60 53.3


User provided reference genes

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