Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00072 Striga asiatica HOM05D006665 ORTHO05D008327 1.2e-100 369.8 173 100.0
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 3.9e-56 221.9 124 79.8
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 3.4e-52 208.8 126 73.0
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 1.7e-51 206.5 126 73.8
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 5.0e-51 204.9 126 71.4
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 1.4e-50 203.4 127 70.9
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 1.4e-50 203.4 126 70.6
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 1.9e-50 203.0 126 69.0
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 4.2e-50 201.8 126 69.8
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 4.2e-50 201.8 126 69.8
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 2.3e-48 196.1 126 69.0
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 5.1e-48 194.9 126 68.3
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 2.5e-47 192.6 126 69.0
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 3.3e-47 192.2 126 66.7
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 9.7e-47 190.7 126 69.0
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 9.7e-47 190.7 128 67.2
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 1.3e-46 190.3 128 65.6
Cpa.g.sc7.98 Carica papaya HOM05D006665 ORTHO05D008327 1.6e-46 189.9 137 63.5
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 2.2e-46 189.5 123 67.5
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 2.8e-46 189.1 145 56.6
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 3.7e-46 188.7 128 65.6
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 4.8e-46 188.3 128 64.8
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 4.8e-46 188.3 128 65.6
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 8.2e-46 187.6 128 65.6
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 8.2e-46 187.6 127 63.8
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 1.1e-45 187.2 126 65.9
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 1.8e-45 186.4 155 58.1
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 2.4e-45 186.0 128 64.8
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 3.1e-45 185.7 125 68.0
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 5.3e-45 184.9 128 64.1
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 5.3e-45 184.9 126 61.9
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 6.9e-45 184.5 123 65.9
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 9.0e-45 184.1 137 59.9
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 9.0e-45 184.1 128 64.1
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 1.5e-44 183.3 137 59.9
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 1.5e-44 183.3 137 59.9
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 2.0e-44 183.0 137 59.9
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 2.0e-44 183.0 126 60.3
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 2.6e-44 182.6 128 64.1
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 2.6e-44 182.6 128 64.1
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 3.4e-44 182.2 128 62.5
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 3.4e-44 182.2 126 64.3
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 1.0e-43 180.6 125 62.4
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 2.2e-43 179.5 122 65.6
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 2.9e-43 179.1 126 62.7
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 5.0e-43 178.3 125 64.0
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 5.0e-43 178.3 125 64.0
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 1.1e-42 177.2 126 64.3
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 1.4e-42 176.8 123 65.0
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 1.4e-42 176.8 137 59.9
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 1.9e-42 176.4 126 57.9
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 2.5e-42 176.0 128 60.2
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 4.2e-42 175.3 134 56.0
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 7.2e-42 174.5 127 65.4
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 2.1e-41 172.9 126 61.1
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 2.1e-41 172.9 126 61.1
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 2.1e-41 172.9 126 61.1
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 2.1e-41 172.9 126 61.1
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 3.6e-41 172.2 134 56.0
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 7.9e-41 171.0 126 60.3
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 1.0e-40 170.6 127 63.0
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 1.0e-40 170.6 127 63.0
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 1.4e-40 170.2 127 63.0
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 2.3e-40 169.5 127 60.6
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 3.0e-40 169.1 126 60.3
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 3.9e-40 168.7 143 53.1
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 5.1e-40 168.3 126 57.9
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 1.1e-39 167.2 116 63.8
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 4.3e-39 165.2 126 58.7
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 7.4e-39 164.5 123 61.0
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 2.8e-38 162.5 142 59.2
Atru.chr10.1583 Acer truncatum HOM05D006665 ORTHO05D008327 1.1e-37 160.6 114 64.0
vmacro16043 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 1.4e-37 160.2 103 68.9
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 3.1e-37 159.1 123 59.3
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 3.1e-37 159.1 125 62.4
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 3.1e-37 159.1 126 59.5
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 3.1e-37 159.1 126 60.3
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 4.1e-37 158.7 126 57.1
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 4.1e-37 158.7 126 57.1
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 3.4e-36 155.6 125 56.8
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 4.5e-36 155.2 125 56.0
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 5.9e-36 154.8 123 57.7
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 1.7e-35 153.3 125 56.0
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 2.9e-35 152.5 123 56.1
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 6.5e-35 151.4 125 53.6
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 1.1e-34 150.6 125 53.6
Haze_06186 Corylus avellana HOM05D006665 ORTHO05D008327 1.9e-34 149.8 149 51.0
Psat7g069080 Pisum sativum HOM05D006665 ORTHO05D008327 2.7e-33 146.0 123 56.1
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 3.1e-29 132.5 145 42.1
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 5.7e-23 111.7 131 39.7
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 1.2e-20 104.0 142 31.7
SEGI_34445 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 2.0e-20 103.2 104 45.2
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 1.7e-19 100.1 124 42.7
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 8.5e-19 97.8 131 36.6
arahy.Tifrunner.gnm1.ann1.XDX40G Arachis hypogaea HOM05D006665 ORTHO05D008327 1.1e-18 97.4 73 58.9
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 3.6e-17 92.4 138 34.8
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 5.2e-16 88.6 88 50.0
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 9.8e-15 84.3 128 42.2
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 1.3e-14 84.0 61 62.3
VMungo0251G0552 Vigna mungo HOM05D006665 ORTHO05D008327 1.7e-11 73.6 74 43.2
RcHm_v2.0_Chr5g0011471 Rosa chinensis HOM05D006665 ORTHO05D008327 1.2e-09 67.4 81 40.7
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 6.1e-09 65.1 56 48.2
arahy.Tifrunner.gnm1.ann1.IN0C4L Arachis hypogaea HOM05D006665 ORTHO05D012122 8.8e-08 61.2 116 35.3
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 2.6e-07 59.7 134 31.3


User provided reference genes

Program Settings