Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-211 738.8 374 100.0
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 6.3e-152 541.2 458 67.5
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 7.7e-134 481.1 400 67.8
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-96 355.9 372 56.7
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-95 353.2 423 47.0
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 8.7e-93 344.7 444 44.6
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-91 339.3 324 56.8
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 6.9e-90 335.1 372 48.1
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-88 329.7 363 51.0
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-87 327.8 181 96.7
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-86 322.8 410 45.1
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 9.9e-81 304.7 532 35.9
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-80 303.1 524 38.7
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 8.1e-75 285.0 432 42.6
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-72 276.9 383 42.6
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-70 269.6 132 96.2
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 8.7e-69 265.0 444 41.2
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-66 256.9 237 54.9
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-64 248.8 367 40.9
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-56 222.6 292 42.8
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-49 200.3 368 38.9
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-45 188.0 368 38.0
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-45 186.4 481 29.5
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-44 183.7 225 45.8
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-42 177.2 435 33.3
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-40 171.0 367 37.9
SGA_v2.0_scaffold89G27407 Striga asiatica HOM05D006612 ORTHO05D009014 5.5e-39 166.0 126 71.4
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 5.2e-37 159.5 451 28.4
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 5.7e-36 156.0 476 28.2
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 7.4e-36 155.6 188 47.9
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 8.2e-35 152.1 190 44.2
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-34 150.2 142 52.8
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-32 143.7 188 46.3
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 8.5e-32 142.1 251 37.5
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 6.1e-30 136.0 524 24.6
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 8.8e-29 132.1 374 29.9
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-27 128.3 144 44.4
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 2.8e-27 127.1 137 40.1
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.6e-25 121.3 407 25.1
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-25 121.3 121 48.8
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 2.0e-25 120.9 142 40.1
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 4.5e-25 119.8 522 24.5
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 7.7e-25 119.0 138 43.5
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-22 111.3 135 39.3
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 6.8e-21 105.9 138 41.3
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-20 105.1 144 34.0
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-19 101.3 129 39.5
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-19 100.9 138 35.5
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-18 98.6 491 23.0
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 3.1e-18 97.1 132 37.1
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 4.1e-18 96.7 142 36.6
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 7.0e-18 95.9 306 25.5
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 9.1e-18 95.5 388 27.6
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-17 95.1 103 43.7
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 1.0e-16 92.0 321 26.8
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 9.5e-15 85.5 352 24.7
SGA_v2.0_scaffold134G34702 Striga asiatica HOM05D006612 ORTHO05D009014 6.1e-14 82.8 135 41.5
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-13 82.0 62 54.8
SGA_v2.0_scaffold24G10399 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-13 81.3 96 41.7
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-13 80.5 349 27.8
Cc02_g21340 Coffea canephora HOM05D006612 ORTHO05D009014 6.8e-13 79.3 131 33.6
Cc00_g35160 Coffea canephora HOM05D006612 ORTHO05D009014 8.9e-13 79.0 134 30.6
Oeu030897.1 Olea europaea HOM05D008860 ORTHO05D010619 7.5e-12 75.9 231 28.1
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 1.7e-11 74.7 190 31.1
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-11 74.3 348 23.0
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 3.7e-11 73.6 114 35.1
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 4.9e-11 73.2 130 33.1
Peaxi162Scf01253g00018 Petunia axillaris HOM05D002261 ORTHO05D002334 4.9e-11 73.2 120 34.2
SGA_v2.0_scaffold2G01273 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-11 73.2 59 49.2
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 8.3e-11 72.4 105 31.4
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 1.4e-10 71.6 114 34.2
SGA_v2.0_scaffold188G40332 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-10 71.6 133 30.8
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.4e-10 70.9 133 29.3
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 2.4e-10 70.9 114 33.3
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 7.0e-10 69.3 69 39.1
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 9.2e-10 68.9 104 31.7
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 1.2e-09 68.6 114 32.5
SGA_v2.0_scaffold132G34534 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-09 68.6 146 32.2
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-09 68.2 165 29.1
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 2.0e-09 67.8 114 33.3
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.0e-09 67.8 132 31.8
Peaxi162Scf00357g00621 Petunia axillaris HOM05D002261 ORTHO05D002334 2.7e-09 67.4 114 32.5
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 3.5e-09 67.0 130 30.8
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 3.5e-09 67.0 179 29.1
Peaxi162Scf00098g01535 Petunia axillaris HOM05D002261 ORTHO05D002334 3.5e-09 67.0 114 33.3
PGSC0003DMG400017531 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.5e-09 67.0 132 32.6
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 4.5e-09 66.6 176 29.0
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 1.3e-08 65.1 142 26.8
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.3e-08 65.1 349 22.3
Nitab4.5_0011586g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-08 65.1 138 31.2
Oeu003462.1 Olea europaea HOM05D008860 ORTHO05D010619 1.3e-08 65.1 336 22.9
Peaxi162Scf00175g00342 Petunia axillaris HOM05D002261 ORTHO05D002334 1.3e-08 65.1 131 32.8
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 1.7e-08 64.7 112 32.1
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 2.9e-08 63.9 112 30.4
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 3.9e-08 63.5 103 29.1
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 3.9e-08 63.5 89 36.0
Peaxi162Scf00047g00443 Petunia axillaris HOM05D002261 ORTHO05D002334 3.9e-08 63.5 114 35.1
Nitab4.5_0003011g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.0e-08 63.2 109 31.2
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 6.6e-08 62.8 191 26.2
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 6.6e-08 62.8 161 31.7
Nitab4.5_0009613g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.6e-08 62.8 135 28.9
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 8.6e-08 62.4 143 24.5
Nitab4.5_0003349g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-07 62.0 132 29.5
Nitab4.5_0006835g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-07 62.0 135 28.9
Peaxi162Scf00371g00312 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-07 61.6 112 30.4
Peaxi162Scf00951g00019 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-07 61.6 136 29.4
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 1.9e-07 61.2 153 28.8
Nitab4.5_0001568g0120 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.9e-07 61.2 109 31.2
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 2.5e-07 60.8 94 25.5
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 3.3e-07 60.5 180 27.8
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 3.3e-07 60.5 397 21.2
Nitab4.5_0000113g0330 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.3e-07 60.5 135 28.1
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 4.3e-07 60.1 143 28.7
Nitab4.5_0000402g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.3e-07 60.1 141 29.8
Peaxi162Scf00809g00418 Petunia axillaris HOM05D002261 ORTHO05D002334 4.3e-07 60.1 149 28.2
Sopen07g011000 Solanum pennellii HOM05D000004 ORTHO05D002334 4.3e-07 60.1 109 32.1
SGA_v2.0_scaffold193G40692 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-07 60.1 88 37.5
Nitab4.5_0000754g0300 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.6e-07 59.7 131 31.3
Nitab4.5_0005054g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.6e-07 59.7 112 32.1
Peaxi162Scf00007g01337 Petunia axillaris HOM05D002261 ORTHO05D002334 1.6e-06 58.2 130 29.2
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 2.1e-06 57.8 130 32.3
SGA_v2.0_scaffold54G19565 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-06 57.8 285 26.0
SGA_v2.0_scaffold68G23014 Striga asiatica HOM05D000096 ORTHO05D000045 2.1e-06 57.8 54 48.1
CAN.G280.21 Capsicum annuum HOM05D002261 ORTHO05D002334 2.8e-06 57.4 131 29.8
CAN.G619.1 Capsicum annuum HOM05D002261 ORTHO05D002334 2.8e-06 57.4 129 30.2
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-06 57.4 109 32.1
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 3.6e-06 57.0 114 30.7
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.1e-06 56.2 134 28.4


User provided reference genes

Program Settings