Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00016 Striga asiatica HOM05D004704 ORTHO05D005384 2.0e-112 409.1 204 100.0
SGA_v2.0_scaffold1G00019 Striga asiatica HOM05D004704 ORTHO05D005384 1.3e-74 283.5 191 77.5
SGA_v2.0_scaffold1G00026 Striga asiatica HOM05D004704 ORTHO05D005384 1.3e-74 283.5 191 78.0
SGA_v2.0_scaffold1G00021 Striga asiatica HOM05D004704 ORTHO05D005384 3.2e-73 278.9 191 75.9
Cc02_g14600 Coffea canephora HOM05D004704 ORTHO05D005384 3.0e-63 245.7 204 61.3
Nitab4.5_0002076g0080 Nicotiana tabacum HOM05D004704 ORTHO05D005384 5.1e-63 245.0 199 62.3
TWI38G0698 Tripterygium wilfordii HOM05D004704 ORTHO05D005384 8.7e-63 244.2 199 61.8
Manes.17G053900 Manihot esculenta HOM05D004704 ORTHO05D005384 1.5e-62 243.4 199 62.3
SalBow8G1161 Salvia bowleyana HOM05D004704 ORTHO05D005384 1.5e-62 243.4 204 62.3
PGR004G2343 Punica granatum HOM05D004704 ORTHO05D005384 7.4e-62 241.1 200 62.0
COL.COLO4_31331 Corchorus olitorius HOM05D004704 ORTHO05D005384 9.6e-62 240.7 199 62.3
Nitab4.5_0001375g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 9.6e-62 240.7 199 61.3
Peaxi162Scf00200g00121 Petunia axillaris HOM05D004704 ORTHO05D005384 9.6e-62 240.7 199 61.3
Eucgr.D00532 Eucalyptus grandis HOM05D004704 ORTHO05D005384 2.8e-61 239.2 200 62.5
SalBow8G4518 Salvia bowleyana HOM05D004704 ORTHO05D005384 2.8e-61 239.2 204 61.3
Thecc.06G174000 Theobroma cacao HOM05D004704 ORTHO05D005384 2.8e-61 239.2 199 60.8
Potri.004G054500 Populus trichocarpa HOM05D004704 ORTHO05D005384 1.1e-60 237.3 199 60.8
PGR004G2271 Punica granatum HOM05D004704 ORTHO05D005384 2.4e-60 236.1 199 60.3
Sabra04G0035600 Salix brachista HOM05D004704 ORTHO05D005384 5.3e-60 235.0 207 58.9
Cfa000584 Carpinus fangiana HOM05D004704 ORTHO05D005384 1.2e-59 233.8 207 58.0
Gohir.D06G134300 Gossypium hirsutum HOM05D004704 ORTHO05D005384 1.2e-59 233.8 199 60.3
Gorai.010G156000 Gossypium raimondii HOM05D004704 ORTHO05D005384 1.2e-59 233.8 199 60.3
Oeu041804.1 Olea europaea HOM05D004704 ORTHO05D005384 1.5e-59 233.4 199 59.3
Sabra11G0046100 Salix brachista HOM05D004704 ORTHO05D005384 1.5e-59 233.4 199 59.3
arahy.Tifrunner.gnm1.ann1.7UF87C Arachis hypogaea HOM05D004704 ORTHO05D005384 2.0e-59 233.0 199 61.3
arahy.Tifrunner.gnm1.ann1.IMTX5S Arachis hypogaea HOM05D004704 ORTHO05D005384 2.0e-59 233.0 199 61.3
Glyma.13G231200 Glycine max HOM05D004704 ORTHO05D005384 4.5e-59 231.9 204 60.3
Migut.M01052 Erythranthe guttata HOM05D004704 ORTHO05D005384 5.8e-59 231.5 209 59.8
Eucgr.D00531 Eucalyptus grandis HOM05D004704 ORTHO05D005384 9.9e-59 230.7 200 60.0
CiPaw.09G067900 Carya illinoinensis HOM05D004704 ORTHO05D005384 1.3e-58 230.3 199 59.3
Lsat_1_v5_gn_7_23201 Lactuca sativa HOM05D004704 ORTHO05D005384 2.9e-58 229.2 199 59.3
Potri.011G064300 Populus trichocarpa HOM05D004704 ORTHO05D005384 2.9e-58 229.2 199 58.8
PGSC0003DMG400004386 Solanum tuberosum HOM05D004704 ORTHO05D005384 2.9e-58 229.2 200 60.5
PGSC0003DMG400018011 Solanum tuberosum HOM05D004704 ORTHO05D005384 3.8e-58 228.8 200 61.5
Dinv04632 Davidia involucrata HOM05D004704 ORTHO05D005384 4.9e-58 228.4 199 57.3
CiPaw.09G067800 Carya illinoinensis HOM05D004704 ORTHO05D005384 6.4e-58 228.0 199 59.3
ECA236G1293 Erigeron canadensis HOM05D004704 ORTHO05D005384 8.4e-58 227.6 199 59.8
Rhsim13G0106100 Rhododendron simsii HOM05D004704 ORTHO05D005384 8.4e-58 227.6 204 56.9
CAN.G2115.3 Capsicum annuum HOM05D004704 ORTHO05D005384 3.2e-57 225.7 199 59.3
Sopen03g002240 Solanum pennellii HOM05D004704 ORTHO05D005384 3.2e-57 225.7 200 59.5
QL05p046090 Quercus lobata HOM05D004704 ORTHO05D005384 4.2e-57 225.3 199 56.3
HanXRQChr04g0115831 Helianthus annuus HOM05D004704 ORTHO05D005384 5.5e-57 224.9 199 57.8
TAR629G2327 Trochodendron aralioides HOM05D004704 ORTHO05D005384 7.1e-57 224.6 199 58.3
TAR629G2609 Trochodendron aralioides HOM05D004704 ORTHO05D005384 7.1e-57 224.6 199 58.3
ClCG01G023620 Citrullus lanatus HOM05D004704 ORTHO05D005384 9.3e-57 224.2 199 57.3
DCAR_004019 Daucus carota HOM05D004704 ORTHO05D005384 1.2e-56 223.8 204 56.9
DCAR_028021 Daucus carota HOM05D004704 ORTHO05D005384 1.6e-56 223.4 199 56.8
Aqoxy1G03204 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 3.5e-56 222.2 204 56.9
DCAR_004020 Daucus carota HOM05D004704 ORTHO05D005384 3.5e-56 222.2 204 56.4
Solyc03g006230.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 6.0e-56 221.5 200 59.0
Aqoxy4G00469 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 1.0e-55 220.7 191 57.6
QL05p045074 Quercus lobata HOM05D004704 ORTHO05D005384 1.0e-55 220.7 199 55.8
Sp7g15490 Schrenkiella parvula HOM05D004704 ORTHO05D005384 1.0e-55 220.7 191 57.6
AL7G35740 Arabidopsis lyrata HOM05D004704 ORTHO05D005384 1.8e-55 219.9 191 57.6
MBI06_g45390_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 1.8e-55 219.9 199 57.8
PSO063G2883 Papaver somniferum HOM05D004704 ORTHO05D005384 1.8e-55 219.9 199 56.8
Aa31LG6G1280 Aethionema arabicum HOM05D004704 ORTHO05D005384 2.3e-55 219.5 191 57.6
BcaC06g30574 Brassica carinata HOM05D004704 ORTHO05D005384 3.0e-55 219.2 191 58.1
BcaNung02719 Brassica carinata HOM05D004704 ORTHO05D005384 3.0e-55 219.2 198 57.6
C07p49820 Brassica napus HOM05D004704 ORTHO05D005384 3.0e-55 219.2 198 57.6
BolC7t45484H Brassica oleracea HOM05D004704 ORTHO05D005384 3.0e-55 219.2 198 57.6
TAR627G0020 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.0e-55 219.2 199 58.3
TAR627G1005 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.0e-55 219.2 199 58.3
TAR706G0003 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.0e-55 219.2 199 58.3
CARHR225390 Cardamine hirsuta HOM05D004704 ORTHO05D005384 3.9e-55 218.8 191 57.6
CsaV3_6G050770 Cucumis sativus L. HOM05D004704 ORTHO05D005384 3.9e-55 218.8 199 57.3
MBI06_g18005_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 3.9e-55 218.8 199 57.3
C01p12500 Brassica napus HOM05D004704 ORTHO05D005384 5.1e-55 218.4 191 56.5
A01p10560 Brassica napus HOM05D004704 ORTHO05D005384 6.7e-55 218.0 191 56.5
Manes.17G053800 Manihot esculenta HOM05D004704 ORTHO05D005384 6.7e-55 218.0 198 56.6
BcaB04g18480 Brassica carinata HOM05D004704 ORTHO05D005384 8.7e-55 217.6 191 58.6
A03p51400 Brassica napus HOM05D004704 ORTHO05D005384 8.7e-55 217.6 191 57.6
Lj1P1195T10 Lonicera japonica HOM05D004704 ORTHO05D005384 8.7e-55 217.6 191 58.6
Nn1g04361 Nelumbo nucifera HOM05D004704 ORTHO05D005384 8.7e-55 217.6 199 57.8
Sed0013784 Sechium edule HOM05D004704 ORTHO05D005384 1.5e-54 216.9 198 56.6
Duzib192G0914 Durio zibethinus HOM05D004704 ORTHO05D005384 1.9e-54 216.5 187 58.3
Carub.0007s2269 Capsella rubella HOM05D004704 ORTHO05D005384 2.5e-54 216.1 191 56.5
A08p13850 Brassica napus HOM05D004704 ORTHO05D005384 4.3e-54 215.3 191 57.1
Thhalv10024794m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 4.3e-54 215.3 198 55.6
Rhsim13G0106000 Rhododendron simsii HOM05D004704 ORTHO05D005384 4.3e-54 215.3 232 52.2
BcaNung03813 Brassica carinata HOM05D004704 ORTHO05D005384 5.6e-54 214.9 191 56.0
MELO3C007223.2 Cucumis melo HOM05D004704 ORTHO05D005384 7.4e-54 214.5 199 56.3
Oeu062343.1 Olea europaea HOM05D004704 ORTHO05D005384 7.4e-54 214.5 128 77.3
BraA01t01002Z Brassica rapa HOM05D004704 ORTHO05D005384 9.6e-54 214.2 191 56.5
BraA08t33364Z Brassica rapa HOM05D004704 ORTHO05D005384 9.6e-54 214.2 191 57.1
MBI06_g18007_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 1.6e-53 213.4 199 55.8
BcaC09g51493 Brassica carinata HOM05D004704 ORTHO05D005384 2.8e-53 212.6 191 55.0
BolC1t01223H Brassica oleracea HOM05D004704 ORTHO05D005384 2.8e-53 212.6 191 55.0
Glyma.13G291900 Glycine max HOM05D004704 ORTHO05D005384 4.8e-53 211.8 198 57.6
VMungo1080G1587 Vigna mungo HOM05D004704 ORTHO05D005384 1.1e-52 210.7 190 57.4
DCAR_013058 Daucus carota HOM05D004704 ORTHO05D005384 1.8e-52 209.9 190 57.4
Aqoxy4G00468 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 4.0e-52 208.8 200 54.0
Phvul.005G096400 Phaseolus vulgaris HOM05D004704 ORTHO05D005384 6.9e-52 208.0 199 54.8
ATR0602G038 Amborella trichopoda HOM05D004704 ORTHO05D005384 9.0e-52 207.6 190 58.4
CSS0042475 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 9.0e-52 207.6 173 61.8
Lj3g0017096 Lotus japonicus HOM05D004704 ORTHO05D005384 9.0e-52 207.6 199 54.3
Glyma.12G209400 Glycine max HOM05D004704 ORTHO05D005384 1.2e-51 207.2 198 57.1
BcaC01g00546 Brassica carinata HOM05D004704 ORTHO05D005384 1.5e-51 206.8 191 56.0
BolC3t20394H Brassica oleracea HOM05D004704 ORTHO05D005384 1.5e-51 206.8 191 56.0
C03p81280 Brassica napus HOM05D004704 ORTHO05D005384 2.0e-51 206.5 191 56.0
Medtr2g091155 Medicago truncatula HOM05D004704 ORTHO05D005384 2.0e-51 206.5 199 53.8
BraA03t14222Z Brassica rapa HOM05D004704 ORTHO05D005384 2.6e-51 206.1 172 59.3
CDE02G3156 Ceratophyllum demersum HOM05D004704 ORTHO05D005384 3.4e-51 205.7 198 54.5
Lalb_Chr24g0400061 Lupinus albus HOM05D004704 ORTHO05D005384 4.5e-51 205.3 200 56.0
Oeu041796.1 Olea europaea HOM05D004704 ORTHO05D005384 5.8e-51 204.9 172 58.1
BcaNung03810 Brassica carinata HOM05D004704 ORTHO05D005384 7.6e-51 204.5 191 55.0
Thhalv10023013m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 7.6e-51 204.5 191 55.5
Medtr2g091165 Medicago truncatula HOM05D004704 ORTHO05D005384 4.9e-50 201.8 190 55.3
Oeu041801.1 Olea europaea HOM05D004704 ORTHO05D005384 1.1e-49 200.7 172 57.6
unitig_578.g16444 Utricularia gibba HOM05D004704 ORTHO05D005384 1.1e-49 200.7 199 52.8
Lalb_Chr20g0121271 Lupinus albus HOM05D004704 ORTHO05D005384 1.4e-49 200.3 199 52.3
Psat5g275720 Pisum sativum HOM05D004704 ORTHO05D005384 2.5e-49 199.5 190 53.7
Lalb_Chr14g0367381 Lupinus albus HOM05D004704 ORTHO05D005384 4.2e-49 198.7 200 53.5
TPR.G11553 Trifolium pratense HOM05D004704 ORTHO05D005384 4.2e-49 198.7 190 54.2
BcaC09g51492 Brassica carinata HOM05D004704 ORTHO05D005384 5.5e-49 198.4 203 50.2
PSO782G0987 Papaver somniferum HOM05D004704 ORTHO05D005384 2.3e-47 193.0 187 54.0
PSO063G6793 Papaver somniferum HOM05D004704 ORTHO05D005384 4.8e-45 185.3 174 55.7
Zm00001eb161990 Zea mays HOM05D004704 ORTHO05D005384 4.8e-45 185.3 200 50.0
GSVIVG01021187001 Vitis vinifera HOM05D004704 ORTHO05D005384 4.1e-44 182.2 119 70.6
Oeu012062.1 Olea europaea HOM05D004704 ORTHO05D005384 2.9e-42 176.0 118 70.3
AT4G18540 Arabidopsis thaliana HOM05D004704 ORTHO05D005384 8.5e-42 174.5 116 68.1
Os01g0613100 Oryza sativa ssp. japonica HOM05D004704 ORTHO05D005384 3.6e-40 169.1 203 47.3
CSS0042208 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 3.0e-39 166.0 204 46.1
Aqoxy1G03203 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 5.7e-38 161.8 165 52.1
Ca_01465_v3 Cicer arietinum L. HOM05D004704 ORTHO05D005384 3.0e-31 139.4 190 44.2
Rhsim13G0186500 Rhododendron simsii HOM05D004704 ORTHO05D005384 1.5e-30 137.1 139 54.0
QL04p061454 Quercus lobata HOM05D004704 ORTHO05D005384 2.0e-30 136.7 138 55.1
Pp3c12_12860 Physcomitrium patens HOM05D004704 ORTHO05D005384 4.3e-30 135.6 196 37.2
Pp3c12_12910 Physcomitrium patens HOM05D004704 ORTHO05D005384 4.3e-30 135.6 196 37.2
Rhsim13G0105800 Rhododendron simsii HOM05D004704 ORTHO05D005384 5.0e-26 122.1 116 56.9
Sabra11G0045900 Salix brachista HOM05D004704 ORTHO05D005384 6.5e-26 121.7 135 53.3
Solyc02g032600.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 5.5e-25 118.6 129 51.2
GSVIVG01021186001 Vitis vinifera HOM05D004704 ORTHO05D000303 3.3e-22 109.4 115 53.9
PSO782G0854 Papaver somniferum HOM05D004704 ORTHO05D005384 7.4e-22 108.2 86 55.8
Nitab4.5_0008860g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 1.8e-12 77.0 88 48.9
TAR627G1161 Trochodendron aralioides HOM05D004704 ORTHO05D005384 8.8e-07 58.2 85 43.5


User provided reference genes

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