Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08943 Striga asiatica HOM05D004912 ORTHO05D006144 1.2e-166 590.1 370 100.0
Oeu059194.1 Olea europaea HOM05D004912 ORTHO05D006144 2.4e-42 177.2 407 38.1
Oeu051787.1 Olea europaea HOM05D004912 ORTHO05D006144 1.3e-37 161.4 385 40.0
SalBow7G4664 Salvia bowleyana HOM05D004912 ORTHO05D006144 2.1e-35 154.1 423 41.8
Migut.N03366 Erythranthe guttata HOM05D004912 ORTHO05D006144 4.0e-34 149.8 396 38.4
Migut.C01310 Erythranthe guttata HOM05D004912 ORTHO05D006144 1.2e-33 148.3 193 49.7
Eucgr.F04115 Eucalyptus grandis HOM05D004912 ORTHO05D006144 4.5e-33 146.4 200 46.0
Lj3g0019671 Lotus japonicus HOM05D004912 ORTHO05D006144 4.5e-33 146.4 415 38.6
TAR376G1051 Trochodendron aralioides HOM05D004912 ORTHO05D006144 1.1e-31 141.7 179 45.8
SGA_v2.0_scaffold118G32511 Striga asiatica HOM05D004912 ORTHO05D006144 4.2e-31 139.8 214 42.5
Cc10_g10040 Coffea canephora HOM05D004912 ORTHO05D006144 7.1e-31 139.0 436 41.7
Dinv41750 Davidia involucrata HOM05D004912 ORTHO05D006144 1.6e-30 137.9 485 29.5
Cpa.g.sc66.6 Carica papaya HOM05D004912 ORTHO05D006144 1.3e-29 134.8 211 42.2
PGSC0003DMG400031411 Solanum tuberosum HOM05D004912 ORTHO05D006144 2.3e-29 134.0 415 42.4
Lj4A484T8 Lonicera japonica HOM05D004912 ORTHO05D006144 3.3e-28 130.2 212 43.4
MBI17_g01791_MAGBIO Magnolia biondii HOM05D004912 ORTHO05D006144 4.3e-28 129.8 222 40.5
Peaxi162Scf00154g00016 Petunia axillaris HOM05D004912 ORTHO05D006144 5.7e-28 129.4 461 35.1
Atru.chr13.2352 Acer truncatum HOM05D004912 ORTHO05D006144 9.6e-28 128.6 415 33.7
COL.COLO4_05030 Corchorus olitorius HOM05D004912 ORTHO05D006144 9.6e-28 128.6 409 33.5
Gohir.D05G275200 Gossypium hirsutum HOM05D004912 ORTHO05D006144 9.6e-28 128.6 438 30.1
Nn5g27542 Nelumbo nucifera HOM05D004912 ORTHO05D006144 9.6e-28 128.6 223 41.3
PGSC0003DMG400031323 Solanum tuberosum HOM05D004912 ORTHO05D006144 9.6e-28 128.6 440 33.0
arahy.Tifrunner.gnm1.ann1.Z6QD6J Arachis hypogaea HOM05D004912 ORTHO05D006144 1.3e-27 128.3 447 33.8
Solyc11g022530.3 Solanum lycopersicum HOM05D004912 ORTHO05D006144 1.3e-27 128.3 413 42.1
EL10Ac1g00125 Beta vulgaris HOM05D004912 ORTHO05D006144 1.6e-27 127.9 424 29.5
Ciclev10001073m.g Citrus clementina HOM05D004912 ORTHO05D006144 1.6e-27 127.9 203 41.4
ECA232G1825 Erigeron canadensis HOM05D004912 ORTHO05D006144 1.6e-27 127.9 193 43.0
Glyma.08G239400 Glycine max HOM05D004912 ORTHO05D006144 2.8e-27 127.1 394 38.3
Prupe.1G554000 Prunus persica HOM05D004912 ORTHO05D006144 2.8e-27 127.1 226 41.2
ClCG11G008550 Citrullus lanatus HOM05D004912 ORTHO05D006144 3.7e-27 126.7 407 34.4
PGR102G1759 Punica granatum HOM05D004912 ORTHO05D006144 4.8e-27 126.3 221 38.9
TWI23G1256 Tripterygium wilfordii HOM05D004912 ORTHO05D006144 4.8e-27 126.3 194 41.8
CiPaw.08G002400 Carya illinoinensis HOM05D004912 ORTHO05D006144 6.3e-27 125.9 213 39.9
MD15G1407700 Malus domestica HOM05D004912 ORTHO05D006144 8.2e-27 125.6 212 41.0
Manes.18G104400 Manihot esculenta HOM05D004912 ORTHO05D006144 8.2e-27 125.6 202 41.1
Nitab4.5_0007332g0020 Nicotiana tabacum HOM05D004912 ORTHO05D006144 8.2e-27 125.6 209 38.3
arahy.Tifrunner.gnm1.ann1.NID8M3 Arachis hypogaea HOM05D004912 ORTHO05D006144 1.1e-26 125.2 445 34.2
VMungo1127G0246 Vigna mungo HOM05D004912 ORTHO05D006144 1.4e-26 124.8 422 37.7
arahy.Tifrunner.gnm1.ann1.SX2JAI Arachis hypogaea HOM05D004912 ORTHO05D006144 2.4e-26 124.0 441 33.1
Ca_27514_v3 Cicer arietinum L. HOM05D004912 ORTHO05D006144 2.4e-26 124.0 445 35.5
Gohir.D13G123600 Gossypium hirsutum HOM05D004912 ORTHO05D006144 2.4e-26 124.0 214 38.8
Actinidia01557 Actinidia chinensis HOM05D004912 ORTHO05D006144 4.1e-26 123.2 196 41.8
Nitab4.5_0006163g0010 Nicotiana tabacum HOM05D004912 ORTHO05D006144 5.3e-26 122.9 483 35.2
Aa31LG4G8550 Aethionema arabicum HOM05D004912 ORTHO05D006144 6.9e-26 122.5 190 41.6
Peaxi162Scf00798g00322 Petunia axillaris HOM05D004912 ORTHO05D006144 6.9e-26 122.5 477 31.2
Sopen11g011640 Solanum pennellii HOM05D004912 ORTHO05D006144 9.0e-26 122.1 415 41.7
ClCG08G000690 Citrullus lanatus HOM05D004912 ORTHO05D006144 1.2e-25 121.7 406 30.0
QL02p026125 Quercus lobata HOM05D004912 ORTHO05D006144 1.2e-25 121.7 495 33.9
Gorai.013G138700 Gossypium raimondii HOM05D004912 ORTHO05D006144 1.5e-25 121.3 218 38.1
arahy.Tifrunner.gnm1.ann1.9DDU7S Arachis hypogaea HOM05D004912 ORTHO05D006144 2.0e-25 120.9 457 33.0
Sabra13G0093000 Salix brachista HOM05D004912 ORTHO05D006144 2.0e-25 120.9 218 39.0
Gohir.A13G119900 Gossypium hirsutum HOM05D004912 ORTHO05D006144 2.6e-25 120.6 222 37.8
Zm00001eb422690 Zea mays HOM05D004912 ORTHO05D006144 3.4e-25 120.2 224 38.8
RcHm_v2.0_Chr7g0227991 Rosa chinensis HOM05D004912 ORTHO05D006144 4.5e-25 119.8 227 37.9
HanXRQChr09g0260131 Helianthus annuus HOM05D004912 ORTHO05D006144 5.9e-25 119.4 450 27.8
MELO3C022195.2 Cucumis melo HOM05D004912 ORTHO05D006144 1.0e-24 118.6 421 36.1
HPP92_005696 Vanilla planifolia HOM05D004912 ORTHO05D006144 1.0e-24 118.6 187 40.6
Lsat_1_v5_gn_7_21041 Lactuca sativa HOM05D004912 ORTHO05D006144 1.3e-24 118.2 184 40.2
Phvul.011G001700 Phaseolus vulgaris HOM05D004912 ORTHO05D006144 1.3e-24 118.2 200 40.5
FvH4_5g31970 Fragaria vesca HOM05D004912 ORTHO05D006144 2.9e-24 117.1 225 38.2
unitig_748.g7733 Utricularia gibba HOM05D004912 ORTHO05D006144 5.0e-24 116.3 370 39.2
CAN.G308.42 Capsicum annuum HOM05D004912 ORTHO05D006144 6.5e-24 115.9 461 34.1
Nitab4.5_0001378g0010 Nicotiana tabacum HOM05D004912 ORTHO05D006144 8.4e-24 115.5 480 38.3
PGSC0003DMG400031324 Solanum tuberosum HOM05D004912 ORTHO05D006144 8.4e-24 115.5 216 35.6
Cfa012942 Carpinus fangiana HOM05D004912 ORTHO05D006144 1.4e-23 114.8 233 36.9
Haze_21297 Corylus avellana HOM05D004912 ORTHO05D006144 1.4e-23 114.8 227 37.4
FAN18G2258 Fragaria x ananassa HOM05D004912 ORTHO05D006144 1.4e-23 114.8 225 38.7
CANSAT25G2909 Cannabis sativa HOM05D004912 ORTHO05D006144 2.5e-23 114.0 460 35.2
FAN04G2666 Fragaria x ananassa HOM05D004912 ORTHO05D006144 2.5e-23 114.0 203 39.4
CsaV3_5G040180 Cucumis sativus L. HOM05D004912 ORTHO05D006144 3.2e-23 113.6 423 39.2
Glyma.12G001600 Glycine max HOM05D004912 ORTHO05D006144 3.2e-23 113.6 378 29.6
Manes.02G197100 Manihot esculenta HOM05D004912 ORTHO05D006144 3.2e-23 113.6 204 37.7
GSVIVG01001772001 Vitis vinifera HOM05D004912 ORTHO05D006144 3.2e-23 113.6 195 39.5
Aqoxy6G00063 Aquilegia oxysepala HOM05D004912 ORTHO05D006144 7.2e-23 112.5 198 39.9
unitig_32.g11185 Utricularia gibba HOM05D004912 ORTHO05D006144 1.2e-22 111.7 372 36.6
Sopen06g023560 Solanum pennellii HOM05D004912 ORTHO05D006144 1.6e-22 111.3 445 35.5
Ah.05g178460 Amaranthus hybridus HOM05D004912 ORTHO05D006144 2.1e-22 110.9 461 31.7
GSVIVG01001769001 Vitis vinifera HOM05D004912 ORTHO05D006144 2.1e-22 110.9 402 33.3
AL1G36130 Arabidopsis lyrata HOM05D004912 ORTHO05D006144 3.5e-22 110.2 198 37.4
Hund27105 Selenicereus undatus HOM05D004912 ORTHO05D006144 3.5e-22 110.2 440 34.5
AUR62022650 Chenopodium quinoa HOM05D004912 ORTHO05D006144 6.1e-22 109.4 213 34.7
CDE06G1282 Ceratophyllum demersum HOM05D004912 ORTHO05D006144 2.3e-21 107.5 462 29.0
Thhalv10018523m.g Eutrema salsugineum HOM05D004912 ORTHO05D006144 2.3e-21 107.5 192 38.0
CSS0047311 Camellia sinensis var. sinensis HOM05D004912 ORTHO05D006144 8.7e-21 105.5 147 45.6
Medtr4g033230 Medicago truncatula HOM05D004912 ORTHO05D006144 1.1e-20 105.1 452 32.3
Medtr4g033265 Medicago truncatula HOM05D004912 ORTHO05D006144 1.1e-20 105.1 452 32.3
Carub.0001s2211 Capsella rubella HOM05D004912 ORTHO05D006144 1.5e-20 104.8 391 29.4
Carub.0002s1888 Capsella rubella HOM05D004912 ORTHO05D006144 2.5e-20 104.0 190 36.8
DCAR_014078 Daucus carota HOM05D004912 ORTHO05D006144 2.5e-20 104.0 195 34.4
CAN.G635.17 Capsicum annuum HOM05D004912 ORTHO05D006144 4.3e-20 103.2 378 39.7
Sp5g27160 Schrenkiella parvula HOM05D004912 ORTHO05D006144 4.3e-20 103.2 192 36.5
AT1G72100 Arabidopsis thaliana HOM05D004912 ORTHO05D006144 5.7e-20 102.8 190 37.4
Solyc06g065050.2 Solanum lycopersicum HOM05D004912 ORTHO05D006144 5.7e-20 102.8 445 35.3
Nitab4.5_0005750g0010 Nicotiana tabacum HOM05D004912 ORTHO05D006144 7.4e-20 102.4 494 33.6
HanXRQChr11g0326311 Helianthus annuus HOM05D004912 ORTHO05D006144 1.6e-19 101.3 245 31.4
CARHR064910 Cardamine hirsuta HOM05D004912 ORTHO05D006144 2.8e-19 100.5 190 36.3
BcaB05g24704 Brassica carinata HOM05D004912 ORTHO05D006144 3.7e-19 100.1 190 35.8
A02p17660 Brassica napus HOM05D004912 ORTHO05D006144 4.8e-19 99.8 190 36.8
BraA02t06813Z Brassica rapa HOM05D004912 ORTHO05D006144 4.8e-19 99.8 190 36.8
BcaC03g15331 Brassica carinata HOM05D004912 ORTHO05D006144 8.2e-19 99.0 190 36.3
C02p29360 Brassica napus HOM05D004912 ORTHO05D006144 8.2e-19 99.0 190 36.3
BolC2t08987H Brassica oleracea HOM05D004912 ORTHO05D006144 8.2e-19 99.0 190 36.3
AUR62004613 Chenopodium quinoa HOM05D004912 ORTHO05D006144 8.2e-19 99.0 467 32.5
AT1G22600 Arabidopsis thaliana HOM05D004912 ORTHO05D006144 1.1e-18 98.6 396 27.5
AL2G31720 Arabidopsis lyrata HOM05D004912 ORTHO05D006144 1.4e-18 98.2 190 35.3
ATR1134G033 Amborella trichopoda HOM05D004912 ORTHO05D006144 5.3e-18 96.3 190 34.7
Sp1g20090 Schrenkiella parvula HOM05D004912 ORTHO05D006144 6.9e-18 95.9 392 28.1
CARHR022970 Cardamine hirsuta HOM05D004912 ORTHO05D006144 9.0e-18 95.5 391 28.9
Rhsim12G0007100 Rhododendron simsii HOM05D004912 ORTHO05D006144 9.0e-18 95.5 344 34.3
Sed0022690 Sechium edule HOM05D004912 ORTHO05D006144 9.0e-18 95.5 417 35.5
Lsat_1_v5_gn_1_26081 Lactuca sativa HOM05D004912 ORTHO05D006144 1.2e-17 95.1 191 37.2
Lsat_1_v5_gn_5_118600 Lactuca sativa HOM05D004912 ORTHO05D006144 1.3e-16 91.7 191 34.6
SEGI_22716 Sequoiadendron giganteum HOM05D004912 ORTHO05D006144 1.3e-16 91.7 182 34.1
THA.LOC104800129 Tarenaya hassleriana HOM05D004912 ORTHO05D006144 2.9e-16 90.5 181 35.4
Hma1.2p1_0009F.1_g005990 Hydrangea macrophylla HOM05D004912 ORTHO05D006144 5.0e-16 89.7 100 51.0
Lalb_Chr01g0000121 Lupinus albus HOM05D004912 ORTHO05D006144 1.9e-15 87.8 199 34.7
Psat7g146280 Pisum sativum HOM05D004912 ORTHO05D006144 2.5e-15 87.4 419 38.4
AagrBONN_evm.TU.Sc2ySwM_228.1722 Anthoceros agrestis HOM05D004395 ORTHO05D005234 4.2e-15 86.7 198 33.8
DCAR_024339 Daucus carota HOM05D004912 ORTHO05D006144 4.2e-15 86.7 186 30.1
TAR628G1727 Trochodendron aralioides HOM05D004912 ORTHO05D006144 7.2e-15 85.9 398 25.9
Aa31LG7G6480 Aethionema arabicum HOM05D004912 ORTHO05D006144 2.1e-14 84.3 195 34.4
vmacro00991 Vaccinium macrocarpon HOM05D004912 ORTHO05D006144 2.7e-14 84.0 153 38.6
Rhsim11G0053200 Rhododendron simsii HOM05D004912 ORTHO05D006144 4.6e-14 83.2 285 28.1
ECA247G4121 Erigeron canadensis HOM05D004912 ORTHO05D006144 7.9e-14 82.4 108 40.7
Pp3c4_23110 Physcomitrium patens HOM05D004395 ORTHO05D005234 1.4e-13 81.6 184 36.4
TPR.G312 Trifolium pratense HOM05D004912 ORTHO05D006144 1.4e-13 81.6 329 40.1
BcaB03g14195 Brassica carinata HOM05D004912 ORTHO05D006144 1.8e-13 81.3 389 27.0
Lalb_Chr19g0140481 Lupinus albus HOM05D004912 ORTHO05D006144 2.3e-13 80.9 106 43.4
BolC7t42633H Brassica oleracea HOM05D004912 ORTHO05D006144 8.8e-13 79.0 387 26.6
BcaC06g34978 Brassica carinata HOM05D004912 ORTHO05D006144 1.1e-12 78.6 387 26.6
Sc01g0001930 Simmondsia chinensis HOM05D004912 ORTHO05D006144 1.1e-12 78.6 332 34.9
C07p21010 Brassica napus HOM05D004912 ORTHO05D006144 4.3e-12 76.6 387 26.4
Pp3c3_12260 Physcomitrium patens HOM05D004395 ORTHO05D005234 4.3e-12 76.6 187 31.0
HPP92_005686 Vanilla planifolia HOM05D004912 ORTHO05D006144 7.4e-12 75.9 74 50.0
Mapoly0029s0129 Marchantia polymorpha HOM05D004395 ORTHO05D005234 9.7e-12 75.5 185 29.2
Migut.C01311 Erythranthe guttata HOM05D004912 ORTHO05D006144 2.2e-11 74.3 162 37.7
A07p14290 Brassica napus HOM05D004912 ORTHO05D006144 2.8e-11 73.9 387 25.8
BraA07t29186Z Brassica rapa HOM05D004912 ORTHO05D006144 2.8e-11 73.9 387 25.8
PGR042G2891 Punica granatum HOM05D004912 ORTHO05D006144 2.8e-11 73.9 193 35.2
Pp3c4_18020 Physcomitrium patens HOM05D004395 ORTHO05D005234 3.7e-11 73.6 181 32.0
Mapoly0073s0092 Marchantia polymorpha HOM05D004395 ORTHO05D005234 1.4e-10 71.6 200 33.0
Thhalv10008247m.g Eutrema salsugineum HOM05D004912 ORTHO05D006144 3.1e-10 70.5 376 25.8
SMO118G0438 Selaginella moellendorffii HOM05D004395 ORTHO05D005234 4.1e-10 70.1 178 31.5
CDE08G1543 Ceratophyllum demersum HOM05D004912 ORTHO05D006144 2.2e-08 64.3 96 40.6
CBR_g50787 Chara braunii HOM05D004395 ORTHO05D005234 4.2e-07 60.1 186 28.5
Ca_10293_v3 Cicer arietinum L. HOM05D004395 ORTHO05D005234 2.7e-06 57.4 117 33.3
Psat6g162440 Pisum sativum HOM05D004395 ORTHO05D005234 2.7e-06 57.4 191 30.4
SMO367G0059 Selaginella moellendorffii HOM05D004395 ORTHO05D005234 2.7e-06 57.4 137 33.6
AagrBONN_evm.TU.Sc2ySwM_344.4364 Anthoceros agrestis HOM05D004395 ORTHO05D005234 3.6e-06 57.0 207 30.4
Eucgr.K03534 Eucalyptus grandis HOM05D004395 ORTHO05D005234 6.1e-06 56.2 185 30.3
Ca_30262_v3 Cicer arietinum L. HOM05D004395 ORTHO05D005234 7.9e-06 55.8 191 29.3


User provided reference genes

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