Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 0.0e+00 1075.5 543 100.0
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 6.3e-161 571.6 544 61.0
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 4.6e-71 273.1 702 34.6
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 6.3e-68 262.7 532 38.7
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 4.2e-48 196.8 642 30.8
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 2.7e-42 177.6 584 30.5
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 2.2e-36 157.9 646 28.8
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 7.0e-35 152.9 693 28.1
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.5e-34 150.6 411 32.4
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 5.9e-34 149.8 694 28.4
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 7.7e-34 149.4 692 28.0
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 7.7e-34 149.4 613 28.7
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.0e-33 149.1 693 27.7
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 7.3e-32 142.9 687 27.8
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 7.3e-32 142.9 661 28.7
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 2.8e-31 141.0 443 30.7
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 3.6e-31 140.6 684 27.6
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 4.7e-31 140.2 673 27.9
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 1.0e-30 139.0 416 31.0
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 1.4e-30 138.7 583 28.8
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 3.0e-30 137.5 564 27.1
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 4.0e-30 137.1 574 28.2
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 4.0e-30 137.1 596 29.0
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 5.2e-30 136.7 581 28.4
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 3.4e-29 134.0 447 29.8
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 3.4e-29 134.0 666 27.6
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 9.8e-29 132.5 582 28.5
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 6.4e-28 129.8 685 25.7
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 4.1e-27 127.1 671 27.0
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 7.8e-26 122.9 671 27.4
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 2.3e-25 121.3 682 26.5
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 5.0e-25 120.2 667 27.3
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 5.0e-25 120.2 679 27.1
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.5e-24 118.6 563 26.6
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 2.5e-24 117.9 628 27.2
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 3.3e-24 117.5 654 26.6
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 4.3e-24 117.1 605 25.8
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 9.5e-24 115.9 497 26.4
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 1.2e-23 115.5 268 36.6
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.8e-23 114.4 651 26.7
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 4.7e-23 113.6 476 27.3
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 1.0e-22 112.5 625 25.6
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 5.2e-22 110.2 652 26.4
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 5.2e-22 110.2 652 26.4
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 6.8e-22 109.8 605 27.1
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 2.0e-21 108.2 676 25.4
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 3.4e-21 107.5 492 25.2
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 5.8e-21 106.7 657 25.9
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 3.7e-20 104.0 512 25.8
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 3.7e-20 104.0 684 26.8
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 1.1e-19 102.4 662 25.2
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 1.4e-19 102.1 666 25.4
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 1.4e-19 102.1 452 26.5
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 1.9e-19 101.7 446 26.9
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.9e-19 101.7 473 25.4
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 2.4e-19 101.3 627 24.7
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.2e-18 99.0 589 24.6
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 1.2e-18 99.0 488 27.5
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 1.0e-17 95.9 624 26.9
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 1.3e-17 95.5 682 26.5
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.5e-16 92.0 583 23.3
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 9.5e-16 89.4 655 27.0
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 1.6e-15 88.6 344 31.7
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 2.8e-15 87.8 640 24.7
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 3.6e-15 87.4 672 24.4
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 3.6e-15 87.4 676 25.3
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 1.8e-14 85.1 481 26.0
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 1.8e-14 85.1 667 23.4
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 2.3e-14 84.7 682 24.8
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 4.0e-14 84.0 717 25.1
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 1.2e-13 82.4 631 23.9
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 1.5e-13 82.0 601 24.5
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 2.0e-13 81.6 659 24.1
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 5.8e-13 80.1 430 26.3
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 9.8e-13 79.3 595 25.5
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 1.3e-12 79.0 639 24.7
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 1.3e-12 79.0 117 41.9
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 1.7e-12 78.6 295 28.8
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 1.7e-12 78.6 324 29.9
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 4.9e-12 77.0 367 28.3
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 6.4e-12 76.6 112 39.3
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 8.3e-12 76.3 695 24.2
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 1.1e-11 75.9 674 24.9
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 1.1e-11 75.9 130 41.5
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 3.2e-11 74.3 680 25.3
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 3.2e-11 74.3 111 39.6
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 4.1e-11 73.9 112 39.3
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 5.4e-11 73.6 673 25.1
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 5.4e-11 73.6 182 34.1
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 2.1e-10 71.6 106 37.7
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 2.7e-10 71.2 312 28.5
unitig_578.g16247 Utricularia gibba HOM05D007315 ORTHO05D008940 2.7e-10 71.2 130 34.6
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 7.8e-10 69.7 290 29.3
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 7.8e-10 69.7 321 27.1
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 1.0e-09 69.3 282 28.7
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 2.3e-09 68.2 218 29.4
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 3.0e-09 67.8 326 27.0
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 3.0e-09 67.8 165 29.7
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 7.3e-08 63.2 432 23.8
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 8.1e-07 59.7 520 23.7
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 1.1e-06 59.3 502 24.3


User provided reference genes

Program Settings