Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08828 Striga asiatica HOM05D000162 ORTHO05D000090 1.1e-79 301.6 485 100.0
SGA_v2.0_scaffold19G08853 Striga asiatica HOM05D000162 ORTHO05D000090 5.7e-20 103.2 78 67.9
SGA_v2.0_scaffold19G08834 Striga asiatica HOM05D000162 ORTHO05D000090 1.4e-18 98.6 90 56.7
MSTRG.9116 Avicennia marina HOM05D000162 ORTHO05D000090 1.2e-14 85.5 77 51.9
Migut.F00914 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.0e-13 82.4 90 46.7
Nitab4.5_0001594g0060 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.8e-13 81.6 81 45.7
Migut.F00916 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.0e-12 78.2 64 57.8
Cc07_g18990 Coffea canephora HOM05D000162 ORTHO05D000090 3.3e-12 77.4 111 40.5
Migut.F00849 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.7e-12 76.6 67 58.2
MSTRG.9605 Avicennia marina HOM05D000162 ORTHO05D000090 1.3e-11 75.5 74 52.7
Hund21894 Selenicereus undatus HOM05D000162 ORTHO05D000090 1.7e-11 75.1 77 45.5
Prupe.6G117400 Prunus persica HOM05D000162 ORTHO05D000090 4.8e-11 73.6 136 36.0
Migut.F00915 Erythranthe guttata HOM05D000162 ORTHO05D000090 8.2e-11 72.8 47 70.2
Cc06_g18850 Coffea canephora HOM05D000162 ORTHO05D000090 2.4e-10 71.2 108 38.9
Cc07_g18960 Coffea canephora HOM05D000162 ORTHO05D000090 1.2e-09 68.9 67 47.8
Cc07_g18980 Coffea canephora HOM05D000162 ORTHO05D000090 1.2e-09 68.9 106 37.7
Cc07_g19010 Coffea canephora HOM05D000162 ORTHO05D000090 1.2e-09 68.9 67 47.8
Cc02_g34440 Coffea canephora HOM05D000162 ORTHO05D000090 3.5e-09 67.4 66 45.5
SGA_v2.0_scaffold225G43016 Striga asiatica HOM05D000162 ORTHO05D000090 4.5e-09 67.0 79 44.3
Cc02_g34450 Coffea canephora HOM05D000162 ORTHO05D000090 5.9e-09 66.6 66 43.9
Migut.F00848 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.0e-08 65.9 63 49.2
Cc02_g15460 Coffea canephora HOM05D000162 ORTHO05D000090 1.7e-08 65.1 105 33.3
FvH4_3g42430 Fragaria vesca HOM05D000162 ORTHO05D000090 2.2e-08 64.7 78 38.5
Peaxi162Scf00342g01330 Petunia axillaris HOM05D000162 ORTHO05D000090 2.9e-08 64.3 99 34.3
PGSC0003DMG400020776 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.9e-08 64.3 81 38.3
MSTRG.9027 Avicennia marina HOM05D000162 ORTHO05D000090 3.8e-08 63.9 61 52.5
ECA233G5832 Erigeron canadensis HOM05D000162 ORTHO05D000090 5.0e-08 63.5 111 35.1
Migut.F00855 Erythranthe guttata HOM05D000162 ORTHO05D000090 8.5e-08 62.8 39 74.4
Peaxi162Scf01053g00033 Petunia axillaris HOM05D000162 ORTHO05D000090 8.5e-08 62.8 71 40.8
ECA240G4244 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.1e-07 62.4 97 38.1
Migut.F00854 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.1e-07 62.4 39 71.8
Hund21880 Selenicereus undatus HOM05D000162 ORTHO05D000090 1.1e-07 62.4 71 43.7
Cc00_g03850 Coffea canephora HOM05D000162 ORTHO05D000090 1.5e-07 62.0 47 61.7
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 1.5e-07 62.0 67 46.3
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 1.5e-07 62.0 67 46.3
HanXRQChr15g0491431 Helianthus annuus HOM05D000162 ORTHO05D000090 1.9e-07 61.6 66 45.5
Peaxi162Scf00129g01534 Petunia axillaris HOM05D000162 ORTHO05D000090 2.5e-07 61.2 66 43.9
Aqoxy2G01058 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 3.2e-07 60.8 78 38.5
CAN.G1440.7 Capsicum annuum HOM05D000162 ORTHO05D000090 3.2e-07 60.8 74 37.8
Nitab4.5_0002468g0090 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.2e-07 60.8 71 40.8
Nitab4.5_0007124g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.2e-07 60.8 71 42.3
Peaxi162Scf00154g00034 Petunia axillaris HOM05D000162 ORTHO05D000090 3.2e-07 60.8 78 37.2
Peaxi162Scf00689g00424 Petunia axillaris HOM05D000162 ORTHO05D000090 3.2e-07 60.8 66 42.4
Cc07_g19040 Coffea canephora HOM05D000162 ORTHO05D000090 4.2e-07 60.5 65 47.7
ECA238G3298 Erigeron canadensis HOM05D000162 ORTHO05D000090 4.2e-07 60.5 78 39.7
HanXRQChr13g0420881 Helianthus annuus HOM05D000162 ORTHO05D000090 4.2e-07 60.5 66 43.9
Migut.G01199 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.5e-07 60.1 79 40.5
Migut.G01201 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.5e-07 60.1 59 47.5
Hund21891 Selenicereus undatus HOM05D008994 ORTHO05D010954 5.5e-07 60.1 92 33.7
Hund27505 Selenicereus undatus HOM05D021897 ORTHO05D010954 5.5e-07 60.1 65 41.5
Migut.G00713 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.2e-07 59.7 78 37.2
Migut.G00831 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.2e-07 59.7 79 39.2
Nitab4.5_0010755g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.2e-07 59.7 68 42.6
HPP92_017937 Vanilla planifolia HOM05D000855 ORTHO05D008530 7.2e-07 59.7 79 36.7
ECA240G3448 Erigeron canadensis HOM05D000162 ORTHO05D000090 9.4e-07 59.3 82 40.2
Lsat_1_v5_gn_3_111021 Lactuca sativa HOM05D000162 ORTHO05D000090 9.4e-07 59.3 66 42.4
CAN.G48.1 Capsicum annuum HOM05D000162 ORTHO05D000090 1.2e-06 58.9 70 37.1
ECA240G0960 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.2e-06 58.9 68 44.1
Dinv41259 Davidia involucrata HOM05D000162 ORTHO05D000090 1.6e-06 58.5 65 47.7
Migut.G00829 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.6e-06 58.5 78 39.7
HanXRQChr13g0418851 Helianthus annuus HOM05D000162 ORTHO05D000090 1.6e-06 58.5 66 42.4
Nitab4.5_0007991g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.1e-06 58.2 68 41.2
Peaxi162Scf00129g01612 Petunia axillaris HOM05D000162 ORTHO05D000090 2.1e-06 58.2 66 40.9
Peaxi162Scf00129g01670 Petunia axillaris HOM05D000162 ORTHO05D000090 2.1e-06 58.2 77 36.4
HanXRQChr13g0420281 Helianthus annuus HOM05D000162 ORTHO05D000090 2.7e-06 57.8 62 45.2
HanXRQChr13g0420351 Helianthus annuus HOM05D000162 ORTHO05D000090 2.7e-06 57.8 68 42.6
Nitab4.5_0003318g0050 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.7e-06 57.8 91 33.0
HanXRQChr03g0090871 Helianthus annuus HOM05D000162 ORTHO05D000090 3.6e-06 57.4 73 39.7
HanXRQChr13g0418841 Helianthus annuus HOM05D000162 ORTHO05D000090 3.6e-06 57.4 66 42.4
Lsat_1_v5_gn_3_111320 Lactuca sativa HOM05D000162 ORTHO05D000090 3.6e-06 57.4 65 41.5
SalBow1G2657 Salvia bowleyana HOM05D000162 ORTHO05D000090 3.6e-06 57.4 78 37.2
CAN.G869.9 Capsicum annuum HOM05D000162 ORTHO05D000090 4.7e-06 57.0 75 36.0
ECA240G4052 Erigeron canadensis HOM05D000162 ORTHO05D000090 4.7e-06 57.0 76 35.5
Migut.G01180 Erythranthe guttata HOM05D000162 ORTHO05D000090 4.7e-06 57.0 78 38.5
Hma1.2p1_0310F.1_g120960 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 4.7e-06 57.0 68 44.1
Lsat_1_v5_gn_3_111041 Lactuca sativa HOM05D000162 ORTHO05D000090 4.7e-06 57.0 60 46.7
Aqoxy3G03369 Aquilegia oxysepala HOM05D002453 ORTHO05D002107 6.1e-06 56.6 77 37.7
HanXRQChr03g0083291 Helianthus annuus HOM05D000162 ORTHO05D000090 6.1e-06 56.6 64 43.8
Lsat_1_v5_gn_3_111360 Lactuca sativa HOM05D000162 ORTHO05D000090 6.1e-06 56.6 57 45.6
SalBow1G7352 Salvia bowleyana HOM05D000162 ORTHO05D000090 6.1e-06 56.6 78 35.9
HanXRQChr13g0424461 Helianthus annuus HOM05D000162 ORTHO05D000090 8.0e-06 56.2 65 41.5
Peaxi162Scf00154g00210 Petunia axillaris HOM05D000162 ORTHO05D000090 8.0e-06 56.2 70 40.0
QL01p002376 Quercus lobata HOM05D006556 ORTHO05D008146 8.0e-06 56.2 90 38.9
vmacro08436 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 8.0e-06 56.2 85 37.6


User provided reference genes

Program Settings