Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08815 Striga asiatica HOM05D004512 ORTHO05D005355 1.1e-59 233.0 107 100.0
SGA_v2.0_scaffold25G10991 Striga asiatica HOM05D004512 ORTHO05D005355 1.2e-55 219.5 107 95.3
MSTRG.22945 Avicennia marina HOM05D004512 ORTHO05D005355 2.8e-52 208.4 107 90.7
SalBow5G1005 Salvia bowleyana HOM05D004512 ORTHO05D005355 2.6e-50 201.8 103 84.5
Oeu046994.1 Olea europaea HOM05D004512 ORTHO05D005355 8.3e-49 196.8 106 85.8
Migut.I00347 Erythranthe guttata HOM05D004512 ORTHO05D005355 3.2e-48 194.9 106 83.0
unitig_26.g9674 Utricularia gibba HOM05D004512 ORTHO05D005355 2.1e-47 192.2 103 86.4
unitig_749.g13425 Utricularia gibba HOM05D004512 ORTHO05D005355 2.7e-47 191.8 103 86.4
Cc04_g07140 Coffea canephora HOM05D004512 ORTHO05D005355 1.0e-46 189.9 107 84.1
MD14G1226500 Malus domestica HOM05D004512 ORTHO05D005355 1.9e-45 185.7 105 79.0
Prupe.5G221100 Prunus persica HOM05D004512 ORTHO05D005355 1.9e-45 185.7 107 76.6
Manes.05G137500 Manihot esculenta HOM05D004512 ORTHO05D005355 2.5e-45 185.3 107 78.5
MD06G1215900 Malus domestica HOM05D004512 ORTHO05D005355 3.3e-45 184.9 105 79.0
Potri.015G054700 Populus trichocarpa HOM05D004512 ORTHO05D005355 3.3e-45 184.9 103 81.6
Cfa019782 Carpinus fangiana HOM05D004512 ORTHO05D005355 5.6e-45 184.1 107 80.4
Haze_18669 Corylus avellana HOM05D004512 ORTHO05D005355 5.6e-45 184.1 107 80.4
CSS0004107 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 7.3e-45 183.7 100 83.0
Potri.012G056900 Populus trichocarpa HOM05D004512 ORTHO05D005355 1.6e-44 182.6 103 78.6
PGSC0003DMG400023110 Solanum tuberosum HOM05D004512 ORTHO05D005355 2.8e-44 181.8 102 83.3
AUR62029861 Chenopodium quinoa HOM05D004512 ORTHO05D005355 3.6e-44 181.4 107 78.5
Manes.01G011800 Manihot esculenta HOM05D004512 ORTHO05D005355 3.6e-44 181.4 107 76.6
Gohir.A09G047600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 4.7e-44 181.0 107 79.4
Gohir.D09G048700 Gossypium hirsutum HOM05D004512 ORTHO05D005355 4.7e-44 181.0 107 79.4
Nitab4.5_0000208g0260 Nicotiana tabacum HOM05D004512 ORTHO05D005355 6.2e-44 180.6 102 83.3
Nitab4.5_0006638g0020 Nicotiana tabacum HOM05D004512 ORTHO05D005355 8.1e-44 180.3 102 82.4
Sabra12G0040400 Salix brachista HOM05D004512 ORTHO05D005355 8.1e-44 180.3 103 78.6
Gohir.D08G105800 Gossypium hirsutum HOM05D004512 ORTHO05D005355 1.1e-43 179.9 107 79.4
Gorai.004G113100 Gossypium raimondii HOM05D004512 ORTHO05D005355 1.1e-43 179.9 107 79.4
Sopen12g018390 Solanum pennellii HOM05D004512 ORTHO05D005355 1.1e-43 179.9 102 82.4
vmacro12793 Vaccinium macrocarpon HOM05D004512 ORTHO05D005355 1.8e-43 179.1 107 76.6
AUR62025859 Chenopodium quinoa HOM05D004512 ORTHO05D005355 2.4e-43 178.7 107 77.6
Gohir.A08G094600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 2.4e-43 178.7 107 78.5
AL1G56000 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 3.1e-43 178.3 101 79.2
Thecc.03G034700 Theobroma cacao HOM05D004512 ORTHO05D005355 3.1e-43 178.3 107 77.6
QL10p025263 Quercus lobata HOM05D004512 ORTHO05D005355 4.0e-43 177.9 103 78.6
THA.LOC104821841 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 4.0e-43 177.9 107 76.6
AT3G18410 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 5.2e-43 177.6 107 75.7
Thhalv10011884m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 5.2e-43 177.6 107 76.6
AT1G49140 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 6.8e-43 177.2 101 79.2
Carub.0001s3830 Capsella rubella HOM05D004512 ORTHO05D005355 6.8e-43 177.2 101 79.2
CARHR039120 Cardamine hirsuta HOM05D004512 ORTHO05D005355 6.8e-43 177.2 107 75.7
Duzib205G0602 Durio zibethinus HOM05D004512 ORTHO05D005355 6.8e-43 177.2 107 77.6
Duzib205G1322 Durio zibethinus HOM05D004512 ORTHO05D005355 6.8e-43 177.2 107 77.6
Thhalv10022379m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 6.8e-43 177.2 109 76.1
THA.LOC104820396 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 6.8e-43 177.2 107 75.7
TAR374G1478 Trochodendron aralioides HOM05D004512 ORTHO05D005355 6.8e-43 177.2 100 80.0
Aa31LG8G5240 Aethionema arabicum HOM05D004512 ORTHO05D005355 1.2e-42 176.4 107 74.8
Carub.0003s1819 Capsella rubella HOM05D004512 ORTHO05D005355 1.2e-42 176.4 107 74.8
Lj2g0019547 Lotus japonicus HOM05D004512 ORTHO05D005355 1.2e-42 176.4 107 72.9
Hund02392 Selenicereus undatus HOM05D004512 ORTHO05D005355 1.5e-42 176.0 102 79.4
CANSAT80G1137 Cannabis sativa HOM05D004512 ORTHO05D005355 2.0e-42 175.6 101 79.2
CANSAT80G2616 Cannabis sativa HOM05D004512 ORTHO05D005355 2.0e-42 175.6 101 79.2
MELO3C002086.2 Cucumis melo HOM05D004512 ORTHO05D005355 2.0e-42 175.6 107 77.6
CsaV3_1G006620 Cucumis sativus L. HOM05D004512 ORTHO05D005355 2.0e-42 175.6 107 77.6
TPR.G27937 Trifolium pratense HOM05D004512 ORTHO05D005355 2.0e-42 175.6 106 74.5
Aa31LG10G4840 Aethionema arabicum HOM05D004512 ORTHO05D005355 2.6e-42 175.3 99 79.8
AL3G31700 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 2.6e-42 175.3 107 74.8
CSS0044395 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 2.6e-42 175.3 96 82.3
CARHR093770 Cardamine hirsuta HOM05D004512 ORTHO05D005355 3.4e-42 174.9 107 74.8
Rhsim12G0143400 Rhododendron simsii HOM05D004512 ORTHO05D005355 3.4e-42 174.9 108 75.0
BcaB04g20765 Brassica carinata HOM05D004512 ORTHO05D005355 4.4e-42 174.5 107 73.8
BraA01t03675Z Brassica rapa HOM05D004512 ORTHO05D005355 4.4e-42 174.5 107 73.8
Duzib068G0917 Durio zibethinus HOM05D004512 ORTHO05D005355 4.4e-42 174.5 107 75.7
BcaC01g03699 Brassica carinata HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 74.8
BcaC09g48802 Brassica carinata HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 73.8
C01p45770 Brassica napus HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 73.8
BolC1t04540H Brassica oleracea HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 73.8
BolC3t17241H Brassica oleracea HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 74.8
CiPaw.16G085900 Carya illinoinensis HOM05D004512 ORTHO05D005355 5.8e-42 174.1 100 80.0
Ca_25495_v3 Cicer arietinum L. HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 73.8
Sp1g36030 Schrenkiella parvula HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 73.8
Sp3g16520 Schrenkiella parvula HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 72.9
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla HOM05D004512 ORTHO05D005355 7.6e-42 173.7 100 79.0
PGR142G1335 Punica granatum HOM05D004512 ORTHO05D005355 9.9e-42 173.3 107 74.8
HPP92_020802 Vanilla planifolia HOM05D004512 ORTHO05D005355 9.9e-42 173.3 107 75.7
BcaC05g28630 Brassica carinata HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 74.8
A03p40660 Brassica napus HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 73.8
A05p31210 Brassica napus HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 74.8
C05p47340 Brassica napus HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 74.8
BolC5t33461H Brassica oleracea HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 74.8
BraA03t13222Z Brassica rapa HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 73.8
BraA05t21962Z Brassica rapa HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 74.8
FvH4_5g12140 Fragaria vesca HOM05D004512 ORTHO05D005355 1.7e-41 172.6 102 75.5
FAN04G1546 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.7e-41 172.6 102 75.5
FAN08G0397 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.7e-41 172.6 102 75.5
FAN13G2727 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.7e-41 172.6 102 75.5
FAN18G2044 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.7e-41 172.6 102 75.5
RcHm_v2.0_Chr7g0185431 Rosa chinensis HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 72.9
Aqoxy3G00301 Aquilegia oxysepala HOM05D004512 ORTHO05D005355 2.9e-41 171.8 99 79.8
EL10Ac5g11436 Beta vulgaris HOM05D004512 ORTHO05D005355 2.9e-41 171.8 107 72.9
BcaB04g18985 Brassica carinata HOM05D004512 ORTHO05D005355 2.9e-41 171.8 107 72.9
Gorai.006G061400 Gossypium raimondii HOM05D004512 ORTHO05D005355 4.9e-41 171.0 97 81.4
CAN.G121.2 Capsicum annuum HOM05D004512 ORTHO05D005355 8.4e-41 170.2 97 81.4
CiPaw.15G130400 Carya illinoinensis HOM05D004512 ORTHO05D005355 8.4e-41 170.2 100 76.0
Eucgr.K02221 Eucalyptus grandis HOM05D004512 ORTHO05D005355 8.4e-41 170.2 107 70.1
VMungo0464G1721 Vigna mungo HOM05D004512 ORTHO05D005355 8.4e-41 170.2 107 72.9
CAN.G790.56 Capsicum annuum HOM05D004512 ORTHO05D005355 1.1e-40 169.9 97 80.4
Peaxi162Scf00634g00116 Petunia axillaris HOM05D004512 ORTHO05D005355 1.1e-40 169.9 100 80.0
Glyma.09G184500 Glycine max HOM05D004512 ORTHO05D005355 1.4e-40 169.5 100 76.0
Lalb_Chr22g0353061 Lupinus albus HOM05D004512 ORTHO05D005355 1.4e-40 169.5 107 72.9
Sc12g0007720 Simmondsia chinensis HOM05D004512 ORTHO05D005355 1.4e-40 169.5 107 75.7
C03p49450 Brassica napus HOM05D004512 ORTHO05D005355 1.9e-40 169.1 102 73.5
Cpa.g.sc3.515 Carica papaya HOM05D004512 ORTHO05D005355 1.9e-40 169.1 106 75.5
Sed0004773 Sechium edule HOM05D004512 ORTHO05D005355 1.9e-40 169.1 100 77.0
TWI81G1036 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 1.9e-40 169.1 105 71.4
DCAR_011353 Daucus carota HOM05D004512 ORTHO05D005355 2.4e-40 168.7 106 74.5
Phvul.004G157200 Phaseolus vulgaris HOM05D004512 ORTHO05D005355 2.4e-40 168.7 107 71.0
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea HOM05D004512 ORTHO05D005355 3.2e-40 168.3 97 78.4
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea HOM05D004512 ORTHO05D005355 3.2e-40 168.3 97 78.4
BcaB06g25886 Brassica carinata HOM05D004512 ORTHO05D005355 3.2e-40 168.3 107 72.9
TAR371G0608 Trochodendron aralioides HOM05D004512 ORTHO05D005355 3.2e-40 168.3 96 80.2
A01p35940 Brassica napus HOM05D004512 ORTHO05D005355 5.4e-40 167.5 97 76.3
FAN18G1297 Fragaria x ananassa HOM05D004512 ORTHO05D005355 5.4e-40 167.5 98 75.5
Glyma.07G091500 Glycine max HOM05D004512 ORTHO05D005355 7.1e-40 167.2 97 77.3
Solyc12g036790.2 Solanum lycopersicum HOM05D004512 ORTHO05D005355 9.2e-40 166.8 97 80.4
Atru.chr9.839 Acer truncatum HOM05D004512 ORTHO05D005355 1.2e-39 166.4 99 75.8
Sed0021676 Sechium edule HOM05D004512 ORTHO05D005355 2.7e-39 165.2 97 78.4
ClCG00G005470 Citrullus lanatus HOM05D004512 ORTHO05D005355 4.6e-39 164.5 96 79.2
ClCG04G011140 Citrullus lanatus HOM05D004512 ORTHO05D005355 4.6e-39 164.5 96 79.2
Medtr6g084520 Medicago truncatula HOM05D004512 ORTHO05D005355 4.6e-39 164.5 97 76.3
ECA233G5146 Erigeron canadensis HOM05D004512 ORTHO05D005355 6.0e-39 164.1 103 74.8
Psat1g037680 Pisum sativum HOM05D004512 ORTHO05D005355 6.0e-39 164.1 96 76.0
Lalb_Chr24g0397761 Lupinus albus HOM05D004512 ORTHO05D005355 7.8e-39 163.7 107 71.0
DCAR_015141 Daucus carota HOM05D004512 ORTHO05D005355 1.3e-38 162.9 100 76.0
Lsat_1_v5_gn_8_144301 Lactuca sativa HOM05D004512 ORTHO05D005355 1.7e-38 162.5 102 75.5
CDE12G0498 Ceratophyllum demersum HOM05D004512 ORTHO05D005355 3.0e-38 161.8 100 76.0
Ciclev10022984m.g Citrus clementina HOM05D004512 ORTHO05D005355 5.1e-38 161.0 106 69.8
PSO782G2824 Papaver somniferum HOM05D004512 ORTHO05D005355 4.3e-37 157.9 89 75.3
TWI60G0557 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 2.1e-36 155.6 94 72.3
HanXRQChr08g0226081 Helianthus annuus HOM05D004512 ORTHO05D005355 3.6e-36 154.8 98 73.5
ATR1125G038 Amborella trichopoda HOM05D004512 ORTHO05D005355 1.1e-35 153.3 85 80.0
Nitab4.5_0007985g0060 Nicotiana tabacum HOM05D004512 ORTHO05D005355 1.8e-35 152.5 89 77.5
Zm00001eb024750 Zea mays HOM05D004512 ORTHO05D005355 9.0e-35 150.2 88 76.1
Zm00001eb224900 Zea mays HOM05D004512 ORTHO05D005355 2.0e-34 149.1 86 77.9
COL.COLO4_05967 Corchorus olitorius HOM05D004512 ORTHO05D005355 7.8e-31 137.1 78 82.1
HanXRQChr16g0517341 Helianthus annuus HOM05D004512 ORTHO05D005355 8.7e-30 133.7 85 72.9
Nn3g17841 Nelumbo nucifera HOM05D004512 ORTHO05D005355 6.2e-28 127.5 68 82.4
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis HOM05D004512 ORTHO05D005355 2.2e-25 119.0 92 60.9
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis HOM05D004512 ORTHO05D005355 3.8e-25 118.2 92 60.9
Mapoly0004s0055 Marchantia polymorpha HOM05D004512 ORTHO05D005355 1.1e-24 116.7 81 66.7
CAN.G519.12 Capsicum annuum HOM05D004512 ORTHO05D005355 1.9e-24 115.9 72 76.4
MD14G1197200 Malus domestica HOM05D004512 ORTHO05D005355 1.9e-24 115.9 75 77.3
MD15G1306200 Malus domestica HOM05D004512 ORTHO05D005355 3.2e-24 115.2 75 72.0
Pp3c9_26150 Physcomitrium patens HOM05D004512 ORTHO05D005355 1.2e-23 113.2 82 63.4
CAN.G133.16 Capsicum annuum HOM05D004512 ORTHO05D005355 3.5e-23 111.7 69 78.3
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 8.7e-22 107.1 86 59.3
SMO169G0039 Selaginella moellendorffii HOM05D004512 ORTHO05D005355 7.4e-21 104.0 75 57.3
Prupe.1G218000 Prunus persica HOM05D004512 ORTHO05D005355 1.3e-20 103.2 100 52.0
Prupe.2G045100 Prunus persica HOM05D004512 ORTHO05D005355 4.8e-20 101.3 64 73.4
BcaB02g11300 Brassica carinata HOM05D004512 ORTHO05D005355 4.5e-18 94.7 76 60.5
Os10g0576000 Oryza sativa ssp. japonica HOM05D004512 ORTHO05D005355 8.4e-17 90.5 54 74.1
MCO12G018 Micromonas commoda HOM05D004512 ORTHO05D005355 1.6e-15 86.3 73 52.1
Duzib084G0409 Durio zibethinus HOM05D004512 ORTHO05D005355 6.2e-12 74.3 54 64.8
SEGI_01620 Sequoiadendron giganteum HOM05D004512 ORTHO05D005355 6.2e-12 74.3 50 70.0
PRCOL_00001312 Prasinoderma coloniale HOM05D004512 ORTHO05D005355 2.6e-10 68.9 74 44.6
Actinidia35087 Actinidia chinensis HOM05D004512 ORTHO05D005355 2.2e-09 65.9 37 83.8
Dinv09796 Davidia involucrata HOM05D004512 ORTHO05D005355 8.4e-09 63.9 37 81.1
Nitab4.5_0001194g0030 Nicotiana tabacum HOM05D004512 ORTHO05D005355 8.4e-09 63.9 58 56.9


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