Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 0.0e+00 1091.3 530 100.0
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 9.2e-266 919.8 530 83.0
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 7.3e-263 910.2 530 82.8
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 1.0e-256 889.8 527 81.6
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 6.6e-256 887.1 530 80.9
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 9.0e-253 876.7 530 80.0
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 5.8e-252 874.0 529 79.2
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 9.9e-252 873.2 530 80.0
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 2.1e-246 855.5 530 77.5
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 1.4e-245 852.8 530 77.0
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 4.5e-244 847.8 531 77.4
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 2.2e-243 845.5 530 76.4
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.9e-243 845.1 528 76.7
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 1.6e-241 839.3 530 74.9
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 4.6e-241 837.8 530 77.2
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 6.0e-241 837.4 528 76.1
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.3e-240 836.3 530 76.6
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.8e-240 835.9 530 76.0
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 1.8e-240 835.9 528 76.3
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 2.3e-240 835.5 526 76.4
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.0e-240 835.1 528 76.3
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 5.1e-240 834.3 530 76.6
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.1e-239 833.2 530 75.3
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.5e-239 832.8 530 75.1
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.9e-239 832.4 564 72.9
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 1.9e-239 832.4 530 75.7
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 2.5e-239 832.0 530 74.3
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 3.3e-239 831.6 530 75.1
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 4.3e-239 831.2 530 76.2
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 5.6e-239 830.9 530 76.2
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 5.6e-239 830.9 528 76.5
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 7.4e-239 830.5 531 76.5
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 1.3e-238 829.7 528 76.3
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 1.3e-238 829.7 530 75.3
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 1.6e-238 829.3 526 77.0
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 2.1e-238 828.9 530 73.8
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.8e-238 828.6 528 74.8
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.8e-238 828.6 528 74.8
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.8e-238 828.6 528 76.5
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 3.7e-238 828.2 530 75.3
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 1.1e-237 826.6 527 74.8
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 2.4e-237 825.5 529 75.6
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 4.0e-237 824.7 528 75.0
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 9.0e-237 823.5 536 74.1
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 2.6e-236 822.0 529 75.2
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 2.6e-236 822.0 528 74.8
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 5.8e-236 820.8 528 75.8
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 1.3e-235 819.7 527 75.7
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.7e-235 819.3 533 75.0
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.2e-235 818.9 528 74.1
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 4.9e-235 817.8 525 75.8
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.4e-235 817.0 533 74.9
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.4e-235 817.0 533 74.9
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 8.4e-235 817.0 530 74.5
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.1e-234 816.6 530 74.2
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 1.1e-234 816.6 530 74.2
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 2.5e-234 815.5 530 74.7
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 3.2e-234 815.1 531 74.4
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 7.1e-234 813.9 530 74.5
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 9.3e-234 813.5 531 73.8
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 1.6e-233 812.8 553 71.1
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 1.6e-233 812.8 531 74.4
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 2.7e-233 812.0 523 75.0
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 3.5e-233 811.6 528 74.6
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.6e-233 811.2 533 74.3
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 4.6e-233 811.2 520 75.4
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 4.6e-233 811.2 526 74.5
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 6.0e-233 810.8 523 75.0
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 1.0e-232 810.1 554 71.5
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 1.0e-232 810.1 531 73.8
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.0e-232 810.1 540 72.8
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 1.8e-232 809.3 531 73.6
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 1.1e-231 806.6 530 73.6
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 2.5e-231 805.4 531 73.8
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 5.7e-231 804.3 531 73.6
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 5.7e-231 804.3 529 72.4
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 1.3e-230 803.1 531 72.9
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.3e-230 803.1 476 81.5
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 2.8e-230 802.0 535 73.6
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 1.1e-229 800.0 531 73.4
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.1e-229 800.0 530 72.3
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 2.4e-229 798.9 560 72.1
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 6.9e-229 797.3 529 72.2
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 1.2e-228 796.6 502 76.5
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 7.6e-228 793.9 531 72.3
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 2.5e-226 788.9 534 72.7
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 7.2e-226 787.3 531 71.6
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 9.3e-226 786.9 531 71.2
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 9.3e-226 786.9 531 71.4
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 9.3e-226 786.9 531 71.4
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 1.6e-225 786.2 531 71.4
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 2.1e-225 785.8 529 72.2
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 3.6e-225 785.0 529 72.0
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 3.6e-225 785.0 528 72.9
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 4.6e-225 784.6 531 70.8
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 6.1e-225 784.3 528 72.0
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 6.1e-225 784.3 528 72.0
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 1.0e-224 783.5 529 72.4
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 1.8e-224 782.7 526 73.6
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 3.0e-224 781.9 529 72.0
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 3.0e-224 781.9 529 72.0
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 3.9e-224 781.6 532 70.3
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 5.1e-224 781.2 474 78.7
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 8.7e-224 780.4 535 70.1
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 2.5e-223 778.9 529 71.5
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 2.5e-223 778.9 529 71.5
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 2.5e-223 778.9 532 71.6
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 4.8e-222 774.6 530 72.5
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 1.4e-221 773.1 530 71.5
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 6.9e-221 770.8 474 78.3
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 2.0e-220 769.2 530 71.5
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 1.3e-219 766.5 530 70.4
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 2.9e-219 765.4 526 71.5
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 6.5e-219 764.2 525 71.8
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 8.5e-219 763.8 529 71.6
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 8.5e-219 763.8 486 75.7
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 2.5e-218 762.3 479 76.6
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 4.2e-218 761.5 519 71.1
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 7.2e-218 760.8 519 71.1
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 9.4e-218 760.4 531 70.2
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 9.4e-218 760.4 583 65.7
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 6.1e-217 757.7 477 76.3
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 1.4e-216 756.5 482 75.5
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.8e-216 756.1 530 70.9
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 3.0e-216 755.4 480 74.8
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 1.5e-215 753.1 530 69.8
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 5.7e-215 751.1 530 69.6
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 9.7e-215 750.4 530 69.6
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 9.7e-215 750.4 563 67.5
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.3e-214 750.0 500 74.0
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 8.5e-211 737.3 532 68.4
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 7.9e-209 730.7 528 68.2
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 2.3e-208 729.2 530 67.0
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 1.5e-207 726.5 530 68.9
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 5.7e-207 724.5 530 66.8
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 1.8e-205 719.5 550 65.6
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 3.2e-202 708.8 571 64.3
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 1.4e-200 703.4 530 66.6
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 3.7e-198 695.3 530 64.2
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 8.2e-198 694.1 533 67.5
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 3.5e-196 688.7 511 69.3
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 7.7e-188 661.0 490 66.9
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 1.6e-180 636.7 390 79.2
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 1.0e-179 634.0 382 79.3
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 5.7e-175 618.2 490 64.5
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 2.9e-174 615.9 387 76.2
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 1.4e-168 597.0 562 56.0
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 1.1e-162 577.4 492 58.3
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 4.0e-160 568.9 459 57.7
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 3.2e-157 559.3 482 56.2
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 2.4e-149 533.1 482 56.0
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 9.9e-143 511.1 362 69.9
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 5.3e-128 462.2 288 78.8
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 6.4e-126 455.3 289 76.5
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.4e-125 454.1 265 78.9
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 1.2e-124 451.1 294 73.1
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 6.2e-121 438.7 293 72.7
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 2.4e-120 436.8 301 72.1
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 7.2e-101 372.1 256 69.5
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 1.0e-94 351.7 244 71.7
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.8e-73 280.4 214 65.0
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 1.1e-56 225.3 449 34.1
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 2.4e-48 197.6 500 30.2
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 6.0e-47 193.0 142 64.1
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.7e-39 167.5 203 47.3
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.4e-35 154.5 141 52.5
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 5.8e-34 149.8 119 63.9
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 4.0e-27 127.1 86 73.3
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.1e-20 104.8 142 48.6
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 1.8e-19 101.7 69 69.6
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 7.6e-18 96.3 60 75.0
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 8.4e-17 92.8 144 37.5
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.8e-06 58.5 179 32.4
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.8e-06 58.5 37 73.0


User provided reference genes

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