Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 1.3e-232 809.3 386 100.0
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 3.0e-112 409.5 264 73.1
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 1.6e-110 403.7 240 80.4
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 1.7e-107 393.7 295 67.5
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 3.7e-107 392.5 273 71.4
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 3.7e-107 392.5 273 71.4
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 5.0e-104 382.1 240 76.2
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 5.6e-103 378.6 242 75.2
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 9.5e-103 377.9 335 57.9
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.6e-102 377.1 244 74.2
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 1.6e-102 377.1 242 73.6
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 6.2e-102 375.2 242 74.4
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 1.8e-101 373.6 266 66.2
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 1.8e-101 373.6 266 67.3
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 2.3e-101 373.2 256 70.7
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 2.3e-101 373.2 238 73.9
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 8.9e-101 371.3 266 67.7
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 8.9e-101 371.3 233 75.5
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 2.0e-100 370.2 269 66.9
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 2.0e-100 370.2 237 73.0
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 2.6e-100 369.8 252 69.8
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 4.4e-100 369.0 237 74.3
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 5.8e-100 368.6 262 66.4
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 9.9e-100 367.9 268 66.4
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 1.3e-99 367.5 269 65.8
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 2.2e-99 366.7 268 67.2
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 3.7e-99 365.9 245 72.7
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 3.7e-99 365.9 242 74.4
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 6.4e-99 365.2 272 66.5
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 9.2e-98 361.3 262 64.5
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 9.2e-98 361.3 239 74.1
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 9.2e-98 361.3 233 73.0
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 2.7e-97 359.8 246 71.1
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 4.6e-97 359.0 270 63.3
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 3.9e-96 355.9 263 65.8
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 6.6e-96 355.1 236 71.6
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.6e-96 355.1 243 68.7
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.1e-95 354.4 243 67.9
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 1.5e-95 354.0 241 68.9
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 1.5e-95 354.0 236 73.3
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 1.5e-95 354.0 260 64.6
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 1.9e-95 353.6 241 67.6
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 1.9e-95 353.6 235 69.4
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.5e-95 353.2 243 68.7
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 3.3e-95 352.8 245 67.3
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 3.3e-95 352.8 240 70.0
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 4.3e-95 352.4 243 68.7
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 5.6e-95 352.1 241 70.1
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 7.3e-95 351.7 241 71.0
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 1.2e-94 350.9 249 68.3
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.2e-94 350.9 239 68.6
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.2e-94 350.9 239 68.6
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 1.6e-94 350.5 245 67.3
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 1.6e-94 350.5 245 67.3
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 1.6e-94 350.5 237 70.9
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 1.6e-94 350.5 251 68.5
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 1.6e-94 350.5 246 69.1
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 2.8e-94 349.7 273 63.4
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 2.8e-94 349.7 240 70.8
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.6e-94 349.4 243 67.5
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 4.7e-94 349.0 270 63.7
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 4.7e-94 349.0 261 66.3
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 4.7e-94 349.0 246 68.3
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 6.2e-94 348.6 240 69.6
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 8.1e-94 348.2 235 68.5
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 8.1e-94 348.2 244 66.4
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 1.1e-93 347.8 245 66.5
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 1.8e-93 347.1 242 64.9
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 8.9e-93 344.7 247 66.0
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 1.2e-92 344.4 245 64.9
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 1.2e-92 344.4 241 70.1
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 9.9e-92 341.3 259 63.3
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 2.9e-91 339.7 374 50.5
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 3.8e-91 339.3 239 68.2
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 3.8e-91 339.3 261 62.8
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 5.4e-90 335.5 243 67.5
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 7.1e-90 335.1 240 68.3
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 1.7e-88 330.5 328 55.5
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 5.1e-88 328.9 280 56.8
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 3.6e-86 322.8 236 65.3
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 3.2e-82 309.7 235 63.4
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 4.2e-82 309.3 269 56.5
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 5.4e-82 308.9 353 45.6
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 1.2e-81 307.8 228 66.2
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 1.7e-80 303.9 238 60.5
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 8.7e-80 301.6 273 53.8
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 8.7e-80 301.6 174 82.8
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 1.5e-79 300.8 266 54.9
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 3.3e-79 299.7 145 97.2
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 3.3e-79 299.7 263 57.0
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 2.0e-76 290.4 261 55.9
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 3.8e-59 233.0 138 78.3
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 3.7e-54 216.5 433 33.3
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 2.0e-52 210.7 170 59.4
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 2.0e-52 210.7 162 62.3
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 7.7e-52 208.8 185 58.9
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 5.0e-51 206.1 147 67.3
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 8.5e-51 205.3 144 68.8
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.4e-50 204.5 173 60.7
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 4.2e-50 203.0 150 66.7
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 2.2e-43 180.6 152 60.5
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 5.5e-42 176.0 150 57.3
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 5.5e-42 176.0 150 58.7
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 1.8e-40 171.0 125 64.8
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 6.7e-40 169.1 125 65.6
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 4.4e-39 166.4 298 36.2
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 5.7e-39 166.0 124 60.5
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 1.1e-37 161.8 125 64.8
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 7.0e-37 159.1 87 85.1
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 1.0e-35 155.2 94 77.7
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 1.7e-35 154.5 237 37.6
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 3.8e-35 153.3 92 77.2
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 3.2e-34 150.2 105 65.7
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 5.3e-29 132.9 99 63.6
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 5.9e-28 129.4 84 70.2
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 2.0e-23 114.4 78 65.4
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 9.7e-23 112.1 106 53.8
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 2.4e-13 80.9 71 56.3
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 2.5e-10 70.9 43 83.7
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 1.4e-08 65.1 51 56.9
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 3.4e-07 60.5 43 67.4
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 4.4e-07 60.1 34 73.5
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 2.2e-06 57.8 72 40.3
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 3.7e-06 57.0 43 67.4
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 8.3e-06 55.8 34 61.8


User provided reference genes

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