Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 7.8e-82 307.0 145 100.0
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 7.3e-80 300.4 145 97.2
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 6.4e-68 260.8 138 87.0
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 5.4e-67 257.7 138 86.2
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 5.4e-67 257.7 138 87.0
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 2.3e-65 252.3 135 87.4
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 4.3e-64 248.1 146 82.2
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 4.3e-64 248.1 146 82.2
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 1.6e-63 246.1 130 87.7
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 2.1e-63 245.7 133 85.7
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 2.8e-63 245.4 142 81.0
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 4.7e-63 244.6 137 83.2
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 6.2e-63 244.2 137 81.8
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 8.1e-63 243.8 129 88.4
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 1.1e-62 243.4 141 81.6
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 1.4e-62 243.0 133 85.7
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 2.3e-62 242.3 137 83.2
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 4.0e-62 241.5 141 80.9
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 2.0e-61 239.2 141 77.3
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 2.0e-61 239.2 137 79.6
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 3.4e-61 238.4 141 79.4
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 3.4e-61 238.4 136 81.6
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 4.4e-61 238.0 133 82.7
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 5.8e-61 237.7 135 79.3
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 5.8e-61 237.7 140 79.3
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 5.8e-61 237.7 137 78.8
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 1.3e-60 236.5 127 85.8
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 2.2e-60 235.7 136 80.9
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 2.9e-60 235.3 134 79.9
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 3.7e-60 235.0 129 83.7
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 1.1e-59 233.4 131 84.0
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 1.1e-59 233.4 132 81.1
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 1.4e-59 233.0 131 83.2
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 1.4e-59 233.0 133 80.5
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 1.4e-59 233.0 135 77.8
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 1.4e-59 233.0 140 77.1
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 4.1e-59 231.5 146 71.2
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 4.1e-59 231.5 134 79.1
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 7.1e-59 230.7 139 77.7
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 9.2e-59 230.3 127 84.3
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 9.2e-59 230.3 134 79.9
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 1.2e-58 229.9 131 83.2
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.6e-58 229.6 141 74.5
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.6e-58 229.6 141 74.5
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.6e-58 229.6 141 74.5
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 1.6e-58 229.6 137 78.8
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.7e-58 228.8 141 73.8
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 2.7e-58 228.8 127 82.7
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 2.7e-58 228.8 137 77.4
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 3.5e-58 228.4 130 79.2
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 3.5e-58 228.4 136 75.7
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 4.6e-58 228.0 140 75.7
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 6.0e-58 227.6 138 76.1
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 6.0e-58 227.6 128 79.7
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 7.8e-58 227.3 141 71.6
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 7.8e-58 227.3 136 75.7
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 7.8e-58 227.3 128 81.2
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 7.8e-58 227.3 141 75.9
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 1.0e-57 226.9 129 79.8
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.0e-57 226.9 147 70.7
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.0e-57 226.9 147 70.7
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 1.7e-57 226.1 141 70.9
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 1.7e-57 226.1 141 71.6
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 1.7e-57 226.1 141 71.6
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 1.7e-57 226.1 141 74.5
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 1.7e-57 226.1 130 79.2
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 2.3e-57 225.7 148 68.2
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 3.0e-57 225.3 141 70.9
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 3.0e-57 225.3 129 78.3
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 5.1e-57 224.6 141 72.3
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 8.6e-57 223.8 141 73.0
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 8.6e-57 223.8 136 76.5
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 1.1e-56 223.4 132 74.2
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 5.6e-56 221.1 141 73.0
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 9.5e-56 220.3 140 75.7
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 2.1e-55 219.2 145 69.0
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 6.8e-54 214.2 132 74.2
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 1.2e-53 213.4 220 53.6
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 1.5e-53 213.0 136 75.0
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 1.5e-53 213.0 162 63.6
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 1.7e-52 209.5 134 70.9
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 1.9e-51 206.1 138 68.1
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 2.4e-51 205.7 129 73.6
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 4.1e-51 204.9 124 73.4
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 6.0e-50 201.1 134 69.4
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 3.9e-49 198.4 129 67.4
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 3.9e-49 198.4 130 71.5
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 5.1e-49 198.0 144 65.3
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 4.0e-46 188.3 140 65.7
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 5.2e-46 188.0 129 65.9
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 2.0e-45 186.0 137 68.6
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 1.3e-44 183.3 225 44.0
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 2.4e-43 179.1 94 87.2
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 5.1e-41 171.4 129 61.2
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.8e-38 162.9 87 87.4
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 7.6e-37 157.5 92 80.4
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 1.3e-36 156.8 94 78.7
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 1.1e-30 137.1 156 44.9
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 4.3e-24 115.2 55 92.7
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 5.6e-24 114.8 117 48.7
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 4.8e-15 85.1 77 55.8
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 9.0e-14 80.9 64 60.9
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.0e-12 77.4 38 86.8
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 1.3e-12 77.0 42 76.2
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.7e-12 76.6 51 72.5
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 1.7e-12 76.6 39 87.2
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 2.2e-12 76.3 42 76.2
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 8.5e-12 74.3 36 86.1
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.1e-11 73.9 42 76.2


User provided reference genes

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