Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 2.2e-137 492.3 245 100.0
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 2.0e-53 213.4 251 53.0
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 2.0e-53 213.4 245 53.5
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 2.0e-42 176.8 263 47.9
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 5.6e-40 168.7 238 45.8
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 1.8e-38 163.7 261 46.0
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 8.9e-38 161.4 253 45.1
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 3.4e-37 159.5 240 43.3
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 9.8e-37 157.9 250 46.8
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 6.4e-36 155.2 258 43.8
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.1e-35 154.5 255 43.9
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 4.1e-35 152.5 255 41.6
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 4.1e-35 152.5 237 42.6
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 7.0e-35 151.8 254 45.3
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 7.8e-34 148.3 263 40.3
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 7.8e-34 148.3 257 43.6
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 1.3e-33 147.5 248 45.6
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 3.0e-33 146.4 252 43.3
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 1.1e-32 144.4 244 42.6
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 5.6e-32 142.1 267 41.9
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 5.6e-32 142.1 238 40.8
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 7.3e-32 141.7 240 45.8
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.1e-31 140.2 265 44.5
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 2.1e-31 140.2 234 43.2
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 4.7e-31 139.0 272 40.4
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 6.2e-31 138.7 270 41.1
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 6.2e-31 138.7 270 41.1
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 8.1e-31 138.3 254 41.3
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 1.4e-30 137.5 251 42.6
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 1.4e-30 137.5 228 44.7
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 2.3e-30 136.7 247 42.1
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 2.3e-30 136.7 262 44.3
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 2.3e-30 136.7 228 45.2
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.1e-30 136.3 247 42.1
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 4.0e-30 136.0 258 40.7
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 6.8e-30 135.2 248 42.7
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 6.8e-30 135.2 248 40.7
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.5e-29 134.0 247 41.3
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 1.5e-29 134.0 241 41.9
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.0e-29 133.7 262 43.1
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 5.8e-29 132.1 245 41.6
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 9.9e-29 131.3 274 40.9
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 1.3e-28 131.0 239 41.4
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 1.7e-28 130.6 257 41.6
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 2.2e-28 130.2 250 40.4
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 2.9e-28 129.8 242 40.9
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 1.4e-27 127.5 247 42.1
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 3.2e-27 126.3 202 44.6
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 3.2e-27 126.3 250 40.0
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 4.1e-27 125.9 233 42.1
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 7.1e-27 125.2 254 40.2
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 9.2e-27 124.8 237 42.2
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 6.0e-26 122.1 238 42.4
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 7.8e-26 121.7 254 40.2
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 7.8e-26 121.7 246 39.0
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 1.0e-25 121.3 276 35.9
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 1.0e-25 121.3 275 38.2
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.3e-25 120.9 224 38.8
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 2.3e-25 120.2 287 34.8
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 3.0e-25 119.8 224 37.9
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 3.0e-25 119.8 253 39.1
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 1.5e-24 117.5 274 39.1
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 1.9e-24 117.1 183 45.9
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 2.5e-24 116.7 251 38.6
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 4.3e-24 115.9 275 38.5
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 4.3e-24 115.9 289 36.0
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 4.3e-24 115.9 278 38.5
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 4.3e-24 115.9 242 38.4
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 5.6e-24 115.5 239 40.2
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 2.8e-23 113.2 268 37.3
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 3.6e-23 112.8 229 38.9
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 3.6e-23 112.8 245 37.1
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 4.7e-23 112.5 270 36.7
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 6.2e-23 112.1 256 39.1
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 1.1e-22 111.3 229 37.1
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 1.4e-22 110.9 290 35.2
Oeu057579.1 Olea europaea HOM05D003173 ORTHO05D003546 1.4e-22 110.9 205 42.4
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 1.8e-22 110.5 276 36.6
Peaxi162Scf00064g00081 Petunia axillaris HOM05D003173 ORTHO05D003546 3.1e-22 109.8 253 37.2
Oeu039861.1 Olea europaea HOM05D003173 ORTHO05D003546 5.2e-22 109.0 198 41.9
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 6.8e-22 108.6 288 34.0
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 8.9e-22 108.2 247 37.7
PGSC0003DMG400029419 Solanum tuberosum HOM05D003173 ORTHO05D003546 8.9e-22 108.2 232 37.1
Nitab4.5_0002353g0090 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.2e-21 107.8 253 36.8
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 1.2e-21 107.8 255 37.6
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 2.6e-21 106.7 239 36.4
Nitab4.5_0000498g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 2.6e-21 106.7 253 36.4
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 7.6e-21 105.1 282 35.8
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 7.6e-21 105.1 293 34.1
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 1.7e-20 104.0 280 33.2
CAN.G401.21 Capsicum annuum HOM05D003173 ORTHO05D003546 2.2e-20 103.6 250 34.4
Solyc12g094390.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 2.2e-20 103.6 248 33.9
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 3.8e-20 102.8 279 35.1
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 4.9e-20 102.4 235 38.7
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 6.4e-20 102.1 268 36.2
Sopen12g031280 Solanum pennellii HOM05D003173 ORTHO05D003546 6.4e-20 102.1 252 34.5
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 1.1e-19 101.3 224 39.3
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 1.1e-19 101.3 267 36.3
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.4e-19 100.1 279 35.1
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 3.2e-19 99.8 265 35.5
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 3.2e-19 99.8 255 38.8
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 4.1e-19 99.4 271 34.3
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 4.1e-19 99.4 268 35.4
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 5.4e-19 99.0 262 37.0
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 1.2e-18 97.8 262 35.9
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 3.5e-18 96.3 269 34.6
A07p15840 Brassica napus HOM05D003173 ORTHO05D003546 3.5e-18 96.3 250 33.2
BraA07t29310Z Brassica rapa HOM05D003173 ORTHO05D003546 3.5e-18 96.3 250 33.2
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 3.5e-18 96.3 257 34.2
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 3.5e-18 96.3 207 40.1
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 1.0e-17 94.7 264 35.6
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 1.0e-17 94.7 215 40.5
Lj5g0013533 Lotus japonicus HOM05D003173 ORTHO05D003546 1.3e-17 94.4 259 32.8
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.3e-17 94.4 186 40.3
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 1.3e-17 94.4 265 33.2
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 1.7e-17 94.0 235 34.9
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 2.3e-17 93.6 248 35.5
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 3.0e-17 93.2 248 36.7
Thhalv10018992m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 3.0e-17 93.2 271 32.8
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 3.0e-17 93.2 195 39.5
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 3.9e-17 92.8 257 33.9
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 5.1e-17 92.4 269 34.6
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 8.7e-17 91.7 264 33.7
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 8.7e-17 91.7 200 37.0
A07p15740 Brassica napus HOM05D003173 ORTHO05D003546 1.5e-16 90.9 199 35.7
BcaB07g32036 Brassica carinata HOM05D003173 ORTHO05D003546 3.3e-16 89.7 253 34.0
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 3.3e-16 89.7 228 35.5
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 4.3e-16 89.4 259 34.4
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 4.3e-16 89.4 204 35.8
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 4.3e-16 89.4 197 37.6
unitig_32.g11393 Utricularia gibba HOM05D002221 ORTHO05D002626 7.3e-16 88.6 197 35.5
BolC7t42850H Brassica oleracea HOM05D003173 ORTHO05D003546 2.1e-15 87.0 250 32.8
ECA238G0569 Erigeron canadensis HOM05D000315 ORTHO05D000527 2.8e-15 86.7 282 30.9
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 4.7e-15 85.9 204 35.8
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 8.1e-15 85.1 256 32.8
BcaC08g47302 Brassica carinata HOM05D003173 ORTHO05D003546 1.4e-14 84.3 257 34.2
BcaC05g25935 Brassica carinata HOM05D003173 ORTHO05D003546 1.8e-14 84.0 245 32.7
C05p18890 Brassica napus HOM05D003173 ORTHO05D003546 1.8e-14 84.0 245 32.7
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 3.1e-14 83.2 262 33.2
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 5.2e-14 82.4 280 31.8
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 5.2e-14 82.4 262 32.4
Thhalv10009337m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 5.2e-14 82.4 207 35.3
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 5.2e-14 82.4 204 34.8
BolC5t30588H Brassica oleracea HOM05D003173 ORTHO05D003546 6.9e-14 82.0 204 34.3
BcaNung03372 Brassica carinata HOM05D003173 ORTHO05D003546 9.0e-14 81.6 250 32.4
C07p23130 Brassica napus HOM05D003173 ORTHO05D003546 9.0e-14 81.6 250 32.4
BcaB03g14324 Brassica carinata HOM05D003173 ORTHO05D003546 1.2e-13 81.3 200 35.0
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 1.2e-13 81.3 262 32.1
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 2.0e-13 80.5 251 32.3
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 4.4e-13 79.3 261 31.0
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 7.6e-13 78.6 262 32.1
A06p16390 Brassica napus HOM05D003173 ORTHO05D003546 2.2e-12 77.0 249 31.3
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 2.2e-12 77.0 201 34.8
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 2.9e-12 76.6 246 33.3
BraA06t24743Z Brassica rapa HOM05D003173 ORTHO05D003546 3.8e-12 76.3 249 32.1
Ca_15466_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 4.9e-12 75.9 97 46.4
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 4.9e-12 75.9 218 30.3
Zm00001eb103980 Zea mays HOM05D003173 ORTHO05D003546 1.1e-11 74.7 262 29.8
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 1.4e-11 74.3 215 35.3
AL1G33140 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 2.4e-11 73.6 207 32.4
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 2.4e-11 73.6 218 31.2
MBI17_g07971_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 2.4e-11 73.6 211 31.3
Os09g0542900 Oryza sativa ssp. japonica HOM05D003173 ORTHO05D003546 4.2e-11 72.8 220 31.4
CANSAT25G0622 Cannabis sativa HOM05D003173 ORTHO05D003546 4.6e-10 69.3 234 28.6
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 4.6e-10 69.3 237 32.5
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 1.0e-09 68.2 223 33.6
Aa31LG7G4670 Aethionema arabicum HOM05D003173 ORTHO05D003546 3.9e-09 66.2 208 33.7
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 3.9e-09 66.2 169 34.3
Ah.00g000650 Amaranthus hybridus HOM05D003173 ORTHO05D003546 8.7e-09 65.1 103 39.8
CDE05G2702 Ceratophyllum demersum HOM05D003173 ORTHO05D003546 1.5e-08 64.3 194 34.0
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 3.3e-08 63.2 189 32.3
HanXRQChr12g0366681 Helianthus annuus HOM05D003173 ORTHO05D003546 4.3e-08 62.8 232 29.3
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 5.6e-08 62.4 253 29.6
BcaC08g47295 Brassica carinata HOM05D003173 ORTHO05D003546 5.6e-08 62.4 100 42.0
Sed0006911 Sechium edule HOM05D003173 ORTHO05D003546 7.3e-08 62.0 197 30.5
CARHR020790 Cardamine hirsuta HOM05D003173 ORTHO05D003546 9.6e-08 61.6 240 27.9
SHI27843 Sapria himalayana HOM05D003173 ORTHO05D003546 2.1e-07 60.5 165 33.9
Prupe.7G175300 Prunus persica HOM05D003173 ORTHO05D003546 3.6e-07 59.7 152 36.2
C06p50010 Brassica napus HOM05D003173 ORTHO05D003546 6.2e-07 58.9 200 32.0
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 8.1e-07 58.5 115 34.8
Cfa007032 Carpinus fangiana HOM05D003173 ORTHO05D003546 1.1e-06 58.2 209 30.6
Zm00001eb331720 Zea mays HOM05D003173 ORTHO05D003546 1.1e-06 58.2 174 31.6
CANSAT25G2444 Cannabis sativa HOM05D003173 ORTHO05D003546 3.1e-06 56.6 222 27.0
DCAR_025088 Daucus carota HOM05D003173 ORTHO05D003546 3.1e-06 56.6 272 29.0
unitig_748.g7605 Utricularia gibba HOM05D003173 ORTHO05D003546 3.1e-06 56.6 181 33.1
CiPaw.07G063500 Carya illinoinensis HOM05D003173 ORTHO05D003546 9.0e-06 55.1 184 31.5
HanXRQChr12g0366691 Helianthus annuus HOM05D003173 ORTHO05D003546 9.0e-06 55.1 256 28.1


User provided reference genes

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