Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 1.7e-161 572.8 334 100.0
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 2.0e-40 170.6 353 41.4
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 2.1e-34 150.6 371 37.5
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 2.8e-34 150.2 352 40.6
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 4.2e-30 136.3 361 37.7
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 7.9e-29 132.1 343 35.6
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 2.5e-27 127.1 391 34.8
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 3.3e-27 126.7 374 37.7
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 6.2e-26 122.5 337 35.3
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 2.4e-25 120.6 337 35.3
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 9.0e-25 118.6 348 35.6
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.9e-23 113.6 346 35.0
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 1.4e-22 111.3 350 35.4
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 1.9e-22 110.9 345 35.9
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 5.5e-22 109.4 347 32.0
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 9.3e-22 108.6 408 32.6
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 6.0e-21 105.9 345 29.6
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 6.0e-21 105.9 267 33.0
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 1.8e-20 104.4 344 35.2
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.8e-20 104.4 351 33.3
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 1.1e-19 101.7 344 32.0
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 1.9e-19 100.9 352 36.1
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 5.7e-19 99.4 386 31.3
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 5.7e-19 99.4 348 33.0
Migut.O00908 Erythranthe guttata HOM05D004095 ORTHO05D003197 7.4e-19 99.0 335 26.6
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 7.4e-19 99.0 346 33.8
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 7.4e-19 99.0 342 33.9
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 2.8e-18 97.1 348 33.3
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 3.7e-18 96.7 340 32.4
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 8.2e-18 95.5 344 29.4
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 1.8e-17 94.4 343 34.4
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 3.1e-17 93.6 198 43.9
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 3.1e-17 93.6 371 34.2
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 6.9e-17 92.4 344 27.6
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 1.5e-16 91.3 343 27.7
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 2.6e-16 90.5 337 32.6
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 4.5e-16 89.7 342 31.0
Migut.N03174 Erythranthe guttata HOM05D004095 ORTHO05D003197 5.9e-16 89.4 335 26.0
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 1.3e-15 88.2 346 29.2
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 1.7e-15 87.8 364 30.2
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 2.2e-15 87.4 395 32.7
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 2.9e-15 87.0 338 35.2
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 5.0e-15 86.3 340 33.2
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 5.0e-15 86.3 338 31.7
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 6.5e-15 85.9 340 31.8
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 8.5e-15 85.5 343 30.3
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 3.2e-14 83.6 364 31.3
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 4.2e-14 83.2 353 32.6
unitig_747.g21527 Utricularia gibba HOM05D002344 ORTHO05D002954 5.5e-14 82.8 346 27.2
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 7.2e-14 82.4 355 30.4
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 2.1e-13 80.9 402 28.6
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 2.1e-13 80.9 341 25.8
A03p63990 Brassica napus HOM05D004095 ORTHO05D003197 2.7e-13 80.5 369 32.0
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 2.7e-13 80.5 353 33.1
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 4.6e-13 79.7 339 32.7
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 4.6e-13 79.7 346 29.5
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 1.3e-12 78.2 346 29.2
Lsat_1_v5_gn_8_29800 Lactuca sativa HOM05D004095 ORTHO05D003197 1.3e-12 78.2 188 44.1
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 1.3e-12 78.2 342 33.6
BraA03t15466Z Brassica rapa HOM05D004095 ORTHO05D003197 2.3e-12 77.4 391 33.0
CARHR244340 Cardamine hirsuta HOM05D004095 ORTHO05D003197 2.3e-12 77.4 351 31.6
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 3.9e-12 76.6 334 29.9
Dinv39538 Davidia involucrata HOM05D004095 ORTHO05D003197 3.9e-12 76.6 132 55.3
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 6.7e-12 75.9 196 44.4
C01p03060 Brassica napus HOM05D004095 ORTHO05D003197 8.7e-12 75.5 344 32.0
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 8.7e-12 75.5 360 28.6
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 8.7e-12 75.5 345 27.8
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 8.7e-12 75.5 347 31.4
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 1.1e-11 75.1 363 24.8
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.1e-11 75.1 335 28.1
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 1.5e-11 74.7 389 31.1
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 3.3e-11 73.6 235 29.8
BcaNung00778 Brassica carinata HOM05D004095 ORTHO05D003197 7.4e-11 72.4 342 33.3
BolC1t00292H Brassica oleracea HOM05D004095 ORTHO05D003197 9.7e-11 72.0 342 32.5
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 9.7e-11 72.0 249 30.9
Carub.0007s0428 Capsella rubella HOM05D004095 ORTHO05D003197 1.3e-10 71.6 361 32.7
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 1.3e-10 71.6 339 32.4
AL7G15100 Arabidopsis lyrata HOM05D004095 ORTHO05D003197 2.2e-10 70.9 373 28.4
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 4.8e-10 69.7 337 33.8
THA.LOC104807504 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 8.2e-10 68.9 359 27.6
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.1e-09 68.6 235 27.7
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 1.1e-09 68.6 344 26.2
AUR62041467 Chenopodium quinoa HOM05D004095 ORTHO05D003197 1.4e-09 68.2 389 30.1
Peaxi162Scf00064g00737 Petunia axillaris HOM05D004095 ORTHO05D003197 2.4e-09 67.4 317 31.2
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.1e-09 67.0 339 29.8
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 3.1e-09 67.0 338 29.3
BcaNung05051 Brassica carinata HOM05D004095 ORTHO05D003197 5.3e-09 66.2 364 30.2
A01p02760 Brassica napus HOM05D004095 ORTHO05D003197 5.3e-09 66.2 344 33.7
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 5.3e-09 66.2 400 27.5
THA.LOC104804274 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 6.9e-09 65.9 360 29.2
QL11p050200 Quercus lobata HOM05D004095 ORTHO05D003197 1.2e-08 65.1 342 31.9
CANSAT25G2395 Cannabis sativa HOM05D004095 ORTHO05D003197 1.5e-08 64.7 96 36.5
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 1.5e-08 64.7 343 32.1
Gohir.A01G110100 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.0e-08 64.3 337 24.9
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 2.0e-08 64.3 243 28.0
Prupe.7G171900 Prunus persica HOM05D004095 ORTHO05D003197 2.0e-08 64.3 181 36.5
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.6e-08 63.9 337 25.2
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.6e-08 63.9 340 25.6
Gohir.D12G193466 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.4e-08 63.5 192 29.2
COL.COLO4_26117 Corchorus olitorius HOM05D004095 ORTHO05D003197 4.5e-08 63.2 235 27.2
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 5.9e-08 62.8 351 29.9
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 7.7e-08 62.4 316 25.6
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 1.0e-07 62.0 189 40.2
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 1.3e-07 61.6 343 28.3
Potri.009G134800 Populus trichocarpa HOM05D015147 ORTHO05D003197 1.7e-07 61.2 346 28.6
C07p61450 Brassica napus HOM05D004095 ORTHO05D003197 2.2e-07 60.8 365 31.2
BolC7t46570H Brassica oleracea HOM05D004095 ORTHO05D003197 2.2e-07 60.8 377 32.6
PSO700G0117 Papaver somniferum HOM05D004095 ORTHO05D003197 2.2e-07 60.8 353 28.3
unitig_0.g2088 Utricularia gibba HOM05D004095 ORTHO05D003197 2.2e-07 60.8 413 22.8
BraA01t00262Z Brassica rapa HOM05D004095 ORTHO05D003197 3.8e-07 60.1 354 32.2
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 3.8e-07 60.1 368 28.5
Gorai.008G208400 Gossypium raimondii HOM05D004095 ORTHO05D003197 6.5e-07 59.3 168 31.5
Actinidia03180 Actinidia chinensis HOM05D004095 ORTHO05D003197 8.5e-07 58.9 258 27.5
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 8.5e-07 58.9 82 42.7
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 8.5e-07 58.9 186 41.9
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 1.1e-06 58.5 353 23.8
TPR.G32858 Trifolium pratense HOM05D013708 ORTHO05D003197 1.1e-06 58.5 346 28.0
CARHR108180 Cardamine hirsuta HOM05D004095 ORTHO05D003197 1.4e-06 58.2 349 27.2
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 1.9e-06 57.8 86 33.7
PSO170G2543 Papaver somniferum HOM05D004095 ORTHO05D003197 1.9e-06 57.8 355 27.9
HanXRQChr12g0366821 Helianthus annuus HOM05D004095 ORTHO05D003197 2.5e-06 57.4 410 25.4
Phvul.001G004700 Phaseolus vulgaris HOM05D013708 ORTHO05D003197 2.5e-06 57.4 101 34.7
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 2.5e-06 57.4 256 30.1
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 4.2e-06 56.6 196 37.8
CARHR069410 Cardamine hirsuta HOM05D008819 ORTHO05D003197 5.5e-06 56.2 84 36.9
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 5.5e-06 56.2 238 29.0
THA.LOC104813782 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 9.4e-06 55.5 348 25.6


User provided reference genes

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