Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold199G41251 Striga asiatica HOM05D006104 ORTHO05D008303 6.2e-217 757.3 415 100.0
Migut.K01201 Erythranthe guttata HOM05D006104 ORTHO05D008303 1.1e-168 597.0 416 76.9
MSTRG.15618 Avicennia marina HOM05D006104 ORTHO05D008303 5.0e-166 588.2 397 77.6
PGSC0003DMG400021455 Solanum tuberosum HOM05D006104 ORTHO05D008303 1.3e-150 537.0 383 71.8
Sopen02g011830 Solanum pennellii HOM05D006104 ORTHO05D008303 4.2e-149 531.9 365 74.5
Solyc02g036470.4 Solanum lycopersicum HOM05D006104 ORTHO05D008303 7.2e-149 531.2 361 75.1
Nitab4.5_0002297g0090 Nicotiana tabacum HOM05D006104 ORTHO05D008303 2.7e-148 529.3 389 71.2
Nitab4.5_0008083g0020 Nicotiana tabacum HOM05D006104 ORTHO05D008303 3.4e-146 522.3 370 73.2
Rhsim10G0186700 Rhododendron simsii HOM05D006104 ORTHO05D008303 5.7e-146 521.5 348 77.0
Peaxi162Scf00784g00028 Petunia axillaris HOM05D006104 ORTHO05D008303 3.1e-144 515.8 365 72.6
Oeu058858.1 Olea europaea HOM05D006104 ORTHO05D008303 2.0e-143 513.1 324 80.6
arahy.Tifrunner.gnm1.ann1.W9ZMNH Arachis hypogaea HOM05D006104 ORTHO05D008303 4.5e-143 511.9 357 71.7
arahy.Tifrunner.gnm1.ann1.B0P6V2 Arachis hypogaea HOM05D006104 ORTHO05D008303 7.7e-143 511.1 357 72.0
Dinv19095 Davidia involucrata HOM05D006104 ORTHO05D008303 5.0e-142 508.4 363 73.6
Lsat_1_v5_gn_8_114940 Lactuca sativa HOM05D006104 ORTHO05D008303 9.5e-141 504.2 357 70.3
Potri.012G145300 Populus trichocarpa HOM05D006104 ORTHO05D008303 2.1e-140 503.1 353 73.1
Hund22221 Selenicereus undatus HOM05D006104 ORTHO05D008303 4.7e-140 501.9 428 63.3
Cfa008019 Carpinus fangiana HOM05D006104 ORTHO05D008303 8.0e-140 501.1 397 66.8
CiPaw.03G009900 Carya illinoinensis HOM05D006104 ORTHO05D008303 8.0e-140 501.1 350 74.6
AUR62037537 Chenopodium quinoa HOM05D006104 ORTHO05D008303 8.0e-140 501.1 365 72.1
ECA232G1605 Erigeron canadensis HOM05D006104 ORTHO05D008303 1.0e-139 500.7 347 74.6
Glyma.11G202900 Glycine max HOM05D006104 ORTHO05D008303 1.8e-139 500.0 398 67.3
Lj6g0001971 Lotus japonicus HOM05D006104 ORTHO05D008303 3.0e-139 499.2 358 71.8
Thecc.04G056600 Theobroma cacao HOM05D006104 ORTHO05D008303 3.0e-139 499.2 377 69.0
Cpa.g.sc108.21 Carica papaya HOM05D006104 ORTHO05D008303 4.0e-139 498.8 344 73.8
HanXRQChr15g0486461 Helianthus annuus HOM05D006104 ORTHO05D008303 8.9e-139 497.7 383 68.7
Haze_14041 Corylus avellana HOM05D006104 ORTHO05D008303 2.6e-138 496.1 395 67.1
Ciclev10011871m.g Citrus clementina HOM05D006104 ORTHO05D008303 3.4e-138 495.7 349 72.5
CAN.G304.9 Capsicum annuum HOM05D006104 ORTHO05D008303 4.4e-138 495.4 370 69.7
Gorai.008G055000 Gossypium raimondii HOM05D006104 ORTHO05D008303 4.4e-138 495.4 333 74.5
Glyma.18G047900 Glycine max HOM05D006104 ORTHO05D008303 5.7e-138 495.0 369 69.6
Gohir.D12G051700 Gossypium hirsutum HOM05D006104 ORTHO05D008303 9.8e-138 494.2 333 74.2
Sp3g01720 Schrenkiella parvula HOM05D006104 ORTHO05D008303 1.7e-137 493.4 363 70.0
AUR62035547 Chenopodium quinoa HOM05D006104 ORTHO05D008303 3.7e-137 492.3 376 69.9
Ah.06g191390 Amaranthus hybridus HOM05D006104 ORTHO05D008303 4.9e-137 491.9 366 68.6
EL10Ac1g01448 Beta vulgaris HOM05D006104 ORTHO05D008303 2.4e-136 489.6 335 73.7
FvH4_5g39720 Fragaria vesca HOM05D006104 ORTHO05D008303 3.2e-136 489.2 387 66.7
MD09G1187600 Malus domestica HOM05D006104 ORTHO05D008303 4.1e-136 488.8 345 73.3
PSO063G5766 Papaver somniferum HOM05D006104 ORTHO05D008303 4.1e-136 488.8 386 67.4
Thhalv10020801m.g Eutrema salsugineum HOM05D006104 ORTHO05D008303 7.0e-136 488.0 380 68.4
Carub.0003s0179 Capsella rubella HOM05D006104 ORTHO05D008303 1.2e-135 487.3 379 67.3
Aa31LG5G13170 Aethionema arabicum HOM05D006104 ORTHO05D008303 2.0e-135 486.5 366 67.8
Duzib138G0961 Durio zibethinus HOM05D006104 ORTHO05D008303 3.5e-135 485.7 334 73.4
CARHR076690 Cardamine hirsuta HOM05D006104 ORTHO05D008303 5.9e-135 485.0 380 66.6
FAN18G3652 Fragaria x ananassa HOM05D006104 ORTHO05D008303 5.9e-135 485.0 378 66.7
BNapus_Darmor_BZH_scaffold_122p00170 Brassica napus HOM05D006104 ORTHO05D008303 1.0e-134 484.2 378 68.0
CANSAT78G2105 Cannabis sativa HOM05D006104 ORTHO05D008303 1.3e-134 483.8 350 72.0
Ca_15100_v3 Cicer arietinum L. HOM05D006104 ORTHO05D008303 2.3e-134 483.0 378 68.5
AL3G12080 Arabidopsis lyrata HOM05D006104 ORTHO05D008303 3.9e-134 482.3 382 66.8
BraA01t04624Z Brassica rapa HOM05D006104 ORTHO05D008303 1.5e-133 480.3 379 68.1
ClCG01G008400 Citrullus lanatus HOM05D006104 ORTHO05D008303 4.3e-133 478.8 389 67.4
DCAR_003391 Daucus carota HOM05D006104 ORTHO05D008303 4.3e-133 478.8 297 79.5
TWI74G1645 Tripterygium wilfordii HOM05D006104 ORTHO05D008303 4.3e-133 478.8 331 72.5
TAR371G0041 Trochodendron aralioides HOM05D006104 ORTHO05D008303 4.3e-133 478.8 337 72.1
RcHm_v2.0_Chr7g0242021 Rosa chinensis HOM05D006104 ORTHO05D008303 7.3e-133 478.0 362 69.9
THA.LOC104820927 Tarenaya hassleriana HOM05D006104 ORTHO05D008303 1.2e-132 477.2 366 68.6
QL02p055508 Quercus lobata HOM05D006104 ORTHO05D008303 2.1e-132 476.5 387 66.4
MBI06_g37978_MAGBIO Magnolia biondii HOM05D006104 ORTHO05D008303 1.0e-131 474.2 351 70.4
Atru.chr1.2189 Acer truncatum HOM05D006104 ORTHO05D008303 1.4e-131 473.8 290 81.4
PGR042G1876 Punica granatum HOM05D006104 ORTHO05D008303 3.1e-131 472.6 354 70.1
BolC1t05884H Brassica oleracea HOM05D006104 ORTHO05D008303 5.2e-131 471.9 395 64.6
Sabra12G0109100 Salix brachista HOM05D006104 ORTHO05D008303 3.4e-130 469.2 391 64.2
SalBow5G0256 Salvia bowleyana HOM05D006104 ORTHO05D008303 1.3e-129 467.2 418 67.0
Nn4g25028 Nelumbo nucifera HOM05D006104 ORTHO05D008303 2.2e-129 466.5 350 68.3
Zm00001eb044830 Zea mays HOM05D006104 ORTHO05D008303 3.7e-129 465.7 353 68.3
AT3G02690 Arabidopsis thaliana HOM05D006104 ORTHO05D008303 4.9e-129 465.3 332 71.1
Eucgr.J01650 Eucalyptus grandis HOM05D006104 ORTHO05D008303 7.0e-128 461.5 291 79.0
Phvul.006G083500 Phaseolus vulgaris HOM05D006104 ORTHO05D008303 7.0e-128 461.5 391 63.2
unitig_748.g7253 Utricularia gibba HOM05D006104 ORTHO05D008303 7.0e-128 461.5 364 67.0
Actinidia32997 Actinidia chinensis HOM05D006104 ORTHO05D008303 9.2e-128 461.1 388 64.7
Medtr3g063250 Medicago truncatula HOM05D006104 ORTHO05D008303 2.7e-127 459.5 386 64.5
VMungo0540G0919 Vigna mungo HOM05D006104 ORTHO05D008303 4.6e-127 458.8 389 62.5
Medtr3g063240 Medicago truncatula HOM05D006104 ORTHO05D008303 2.3e-126 456.4 324 71.3
Cc07_g12610 Coffea canephora HOM05D006104 ORTHO05D008303 5.0e-126 455.3 275 81.8
CDE04G1404 Ceratophyllum demersum HOM05D006104 ORTHO05D008303 8.6e-126 454.5 347 66.0
FAN08G3450 Fragaria x ananassa HOM05D006104 ORTHO05D008303 8.6e-126 454.5 458 55.5
Aqoxy3G04351 Aquilegia oxysepala HOM05D006104 ORTHO05D008303 5.6e-125 451.8 356 65.7
GSVIVG01033198001 Vitis vinifera HOM05D006104 ORTHO05D008303 5.6e-125 451.8 276 81.2
ATR0124G053 Amborella trichopoda HOM05D006104 ORTHO05D008303 1.2e-124 450.7 342 68.7
Lj4A249G56 Lonicera japonica HOM05D006104 ORTHO05D008303 1.2e-124 450.7 276 82.6
Gohir.A12G053200 Gossypium hirsutum HOM05D006104 ORTHO05D008303 2.8e-124 449.5 304 74.7
HPP92_022205 Vanilla planifolia HOM05D006104 ORTHO05D008303 4.0e-123 445.7 347 66.6
Lalb_Chr18g0053941 Lupinus albus HOM05D006104 ORTHO05D008303 3.4e-122 442.6 350 65.7
AagrBONN_evm.TU.Sc2ySwM_368.1984 Anthoceros agrestis HOM05D006104 ORTHO05D008303 3.2e-120 436.0 368 64.4
MELO3C025108.2 Cucumis melo HOM05D006104 ORTHO05D008303 7.3e-117 424.9 489 51.5
Sc09g0004650 Simmondsia chinensis HOM05D006104 ORTHO05D008303 2.3e-115 419.9 357 63.0
BNapus_Darmor_BZH_scaffold_99p00200 Brassica napus HOM05D006104 ORTHO05D008303 3.5e-111 406.0 261 77.8
vmacro20444 Vaccinium macrocarpon HOM05D006104 ORTHO05D008303 4.6e-111 405.6 369 62.6
Pp3c19_6070 Physcomitrium patens HOM05D006104 ORTHO05D008303 8.9e-107 391.3 373 57.6
SMO364G0667 Selaginella moellendorffii HOM05D006104 ORTHO05D008303 1.5e-106 390.6 369 58.3
FAN04G1807 Fragaria x ananassa HOM05D006104 ORTHO05D008303 3.4e-106 389.4 478 48.5
EL10Ac4g08870 Beta vulgaris HOM05D006104 ORTHO05D008303 7.1e-104 381.7 243 76.5
Mapoly0068s0059 Marchantia polymorpha HOM05D006104 ORTHO05D008303 1.2e-103 380.9 308 65.3
CBR_g22386 Chara braunii HOM05D006104 ORTHO05D008303 3.3e-101 372.9 405 52.6
Hma1.2p1_0085F.1_g043890 Hydrangea macrophylla HOM05D006104 ORTHO05D008303 7.3e-101 371.7 344 60.5
MCO16G393 Micromonas commoda HOM05D006104 ORTHO05D008303 1.3e-100 370.9 355 55.8
CSS0044834 Camellia sinensis var. sinensis HOM05D006104 ORTHO05D008303 2.1e-100 370.2 287 67.2
Manes.01G125800 Manihot esculenta HOM05D006104 ORTHO05D008303 9.0e-91 338.2 276 65.6
CsaV3_5G024350 Cucumis sativus L. HOM05D006104 ORTHO05D008303 1.3e-89 334.3 241 71.0
Prupe.8G267800 Prunus persica HOM05D006104 ORTHO05D008303 6.0e-87 325.5 243 67.9
COL.COLO4_13439 Corchorus olitorius HOM05D006104 ORTHO05D008303 1.0e-86 324.7 226 73.5
Sed0008277 Sechium edule HOM05D006104 ORTHO05D008303 6.2e-84 315.5 231 70.1
Cre12.g507950 Chlamydomonas reinhardtii HOM05D006104 ORTHO05D008303 8.4e-81 305.1 381 48.6
Pp3c7_24690 Physcomitrium patens HOM05D006104 ORTHO05D008303 2.1e-79 300.4 305 49.8
PRCOL_00000403 Prasinoderma coloniale HOM05D006104 ORTHO05D008303 2.1e-79 300.4 294 56.8
SEGI_11411 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 3.0e-78 296.6 251 62.5
TPR.G37386 Trifolium pratense HOM05D006104 ORTHO05D008303 1.8e-75 287.3 199 73.4
QL02p056562 Quercus lobata HOM05D006104 ORTHO05D008303 1.1e-69 268.1 158 82.3
Os10g0493900 Oryza sativa ssp. japonica HOM05D006104 ORTHO05D008303 2.6e-66 256.9 158 77.2
SEGI_16808 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 1.1e-59 235.0 147 76.9
arahy.Tifrunner.gnm1.ann1.4P08NV Arachis hypogaea HOM05D006104 ORTHO05D008303 6.5e-57 225.7 212 58.0
TPR.G14061 Trifolium pratense HOM05D006104 ORTHO05D008303 2.1e-55 220.7 215 60.5
Psat5g144680 Pisum sativum HOM05D006104 ORTHO05D008303 6.3e-44 182.6 196 55.1
arahy.Tifrunner.gnm1.ann1.2Q0DPQ Arachis hypogaea HOM05D006104 ORTHO05D008303 4.4e-29 133.3 129 57.4
BraA02t04668Z Brassica rapa HOM05D006104 ORTHO05D008303 3.7e-28 130.2 135 54.1
arahy.Tifrunner.gnm1.ann1.LG1UYC Arachis hypogaea HOM05D006104 ORTHO05D008303 1.8e-27 127.9 122 58.2
Psat5g144720 Pisum sativum HOM05D006104 ORTHO05D008303 1.5e-24 118.2 107 58.9
Psat0s2701g0160 Pisum sativum HOM05D006104 ORTHO05D000113 2.3e-22 110.9 97 62.9
arahy.Tifrunner.gnm1.ann1.12AD17 Arachis hypogaea HOM05D000052 ORTHO05D000046 5.7e-21 106.3 61 82.0
Cpa.g.c43318 Carica papaya HOM05D006104 ORTHO05D117575 8.6e-17 92.4 259 28.6
Psat7g173760 Pisum sativum HOM05D006104 ORTHO05D008303 2.5e-16 90.9 70 67.1
Psat5g203840 Pisum sativum HOM05D006104 ORTHO05D324349 1.5e-13 81.6 158 44.3
Psat4g208480 Pisum sativum HOM05D006104 ORTHO05D008303 1.9e-11 74.7 41 87.8
Psat4g208520 Pisum sativum HOM05D006104 ORTHO05D008303 8.6e-09 65.9 58 62.1


User provided reference genes

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