Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 2.0e-142 509.2 278 100.0
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 1.2e-51 207.6 267 49.8
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 6.3e-48 195.3 259 50.2
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.7e-45 187.2 253 47.8
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 3.6e-43 179.5 255 47.1
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 1.5e-41 174.1 246 48.0
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 2.0e-41 173.7 248 48.0
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 3.4e-41 172.9 248 46.4
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 3.4e-41 172.9 246 46.7
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 4.4e-41 172.6 258 47.3
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 1.3e-40 171.0 262 46.2
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 2.2e-40 170.2 243 46.9
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 6.3e-40 168.7 249 45.4
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 8.3e-40 168.3 257 44.0
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.1e-39 167.9 263 43.7
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 1.4e-39 167.5 224 47.3
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 1.4e-39 167.5 263 43.3
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.4e-39 167.5 263 43.3
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 2.4e-39 166.8 275 43.6
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 3.1e-39 166.4 271 43.5
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 7.0e-39 165.2 257 43.6
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 7.0e-39 165.2 239 46.0
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.0e-38 163.7 257 43.6
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 2.0e-38 163.7 243 46.5
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 2.7e-38 163.3 245 45.3
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 3.5e-38 162.9 240 46.7
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 1.3e-37 161.0 248 46.0
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 1.7e-37 160.6 266 44.0
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 3.8e-37 159.5 271 42.4
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 5.0e-37 159.1 253 45.5
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 6.5e-37 158.7 269 40.5
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 6.5e-37 158.7 273 42.5
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.1e-36 157.9 251 45.8
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 1.1e-36 157.9 244 46.7
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 1.5e-36 157.5 239 45.6
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 3.2e-36 156.4 249 42.6
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 9.4e-36 154.8 224 51.3
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 9.4e-36 154.8 269 41.6
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 1.2e-35 154.5 270 40.7
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 2.7e-35 153.3 245 44.9
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 2.7e-35 153.3 262 39.7
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 2.7e-35 153.3 257 41.2
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 3.6e-35 152.9 270 43.3
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 6.1e-35 152.1 272 43.0
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 1.0e-34 151.4 235 48.5
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 1.0e-34 151.4 271 39.5
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 3.0e-34 149.8 269 42.8
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 4.0e-34 149.4 242 45.5
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 5.2e-34 149.1 248 42.3
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 6.8e-34 148.7 267 40.1
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 1.2e-33 147.9 218 44.5
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 3.4e-33 146.4 223 45.7
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.7e-32 144.1 271 41.0
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 2.2e-32 143.7 254 42.9
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 2.8e-32 143.3 247 46.2
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.7e-32 142.9 240 47.1
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 2.4e-31 140.2 224 45.5
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 2.4e-31 140.2 248 45.2
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 2.4e-31 140.2 239 42.7
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.1e-31 139.8 287 42.9
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 4.1e-31 139.4 255 40.0
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 1.6e-30 137.5 274 39.4
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 4.5e-30 136.0 246 43.1
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 5.9e-30 135.6 271 39.9
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 1.7e-29 134.0 271 39.9
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 3.8e-29 132.9 242 45.5
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.5e-28 131.0 219 48.4
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 3.3e-28 129.8 286 41.6
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 3.3e-28 129.8 286 41.6
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 5.5e-28 129.0 224 43.3
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 7.2e-28 128.6 248 43.1
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 9.5e-28 128.3 221 46.2
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 1.2e-27 127.9 221 43.9
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 1.6e-27 127.5 219 43.4
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 2.1e-27 127.1 248 42.7
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 2.1e-27 127.1 235 41.7
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 4.7e-27 125.9 221 44.3
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 4.7e-27 125.9 247 42.5
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 4.7e-27 125.9 227 42.3
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 6.1e-27 125.6 247 42.5
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 2.3e-26 123.6 250 42.0
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.7e-24 117.5 77 77.9
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 2.2e-24 117.1 211 40.8
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 1.1e-23 114.8 219 38.8
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 7.0e-23 112.1 242 36.0
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 1.0e-21 108.2 248 37.1
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 6.6e-21 105.5 193 40.4
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.1e-20 104.8 245 35.9
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 1.2e-19 101.3 203 38.4
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 3.6e-19 99.8 210 38.1
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 4.7e-19 99.4 205 37.1
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 6.1e-19 99.0 201 40.8
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 7.5e-17 92.0 201 35.3
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 9.8e-17 91.7 94 59.6
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 2.2e-16 90.5 189 39.2
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 1.6e-14 84.3 183 36.6
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 7.8e-14 82.0 209 32.5
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 3.3e-12 76.6 162 36.4
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 9.5e-12 75.1 186 33.9
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 1.2e-11 74.7 215 33.0
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 7.1e-07 58.9 157 31.2
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 4.6e-06 56.2 202 29.2
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 4.6e-06 56.2 174 37.4
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 6.0e-06 55.8 121 34.7


User provided reference genes

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