Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 9.0e-306 1052.7 521 100.0
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 2.5e-183 646.0 534 62.7
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 7.6e-180 634.4 502 64.3
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 6.9e-165 584.7 494 61.7
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 9.0e-165 584.3 494 61.5
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 3.4e-164 582.4 515 58.3
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 3.4e-164 582.4 496 61.1
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 3.4e-164 582.4 518 56.9
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 8.5e-163 577.8 523 57.6
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 2.5e-162 576.2 513 58.7
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 6.1e-161 571.6 475 60.8
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 3.9e-160 568.9 502 59.6
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 1.1e-159 567.4 533 55.5
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 4.3e-159 565.5 517 57.3
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 6.3e-158 561.6 502 59.2
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 1.1e-157 560.8 471 60.1
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 1.8e-157 560.1 527 56.2
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 1.2e-156 557.4 510 56.3
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 2.0e-156 556.6 514 55.8
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 2.9e-155 552.7 520 55.6
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 5.0e-155 552.0 464 59.9
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 1.4e-154 550.4 465 60.2
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 1.9e-154 550.1 527 54.3
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 1.9e-154 550.1 465 60.0
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 3.2e-154 549.3 481 57.8
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 4.2e-154 548.9 497 58.1
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 9.4e-154 547.7 459 60.3
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 1.2e-153 547.4 465 58.7
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 1.4e-152 543.9 465 58.5
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.4e-152 543.9 529 55.0
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 1.4e-152 543.9 514 55.6
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 1.8e-152 543.5 522 55.9
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 3.0e-152 542.7 533 55.0
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 3.0e-152 542.7 464 59.3
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 3.9e-152 542.3 519 53.9
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 5.1e-152 542.0 529 54.4
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 5.1e-152 542.0 463 58.3
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 8.8e-152 541.2 508 54.7
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 2.6e-151 539.7 522 53.4
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 3.3e-151 539.3 485 56.9
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.3e-150 537.3 533 54.6
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.7e-150 537.0 529 54.6
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 1.7e-150 537.0 511 55.6
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 2.8e-150 536.2 515 53.6
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 8.2e-150 534.6 491 55.8
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 8.2e-150 534.6 524 55.5
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.4e-149 533.9 533 54.2
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 1.8e-149 533.5 513 54.2
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 3.1e-149 532.7 510 53.1
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 5.3e-149 531.9 522 52.9
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 9.1e-149 531.2 463 57.0
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 1.7e-147 526.9 526 50.4
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 1.9e-146 523.5 458 57.6
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 2.5e-146 523.1 465 56.6
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 3.2e-146 522.7 463 56.2
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 3.2e-146 522.7 511 52.3
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 9.4e-146 521.2 511 52.4
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 1.2e-145 520.8 510 52.7
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 1.2e-145 520.8 510 52.0
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 4.7e-145 518.8 529 53.7
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.8e-144 516.9 458 56.3
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 1.8e-144 516.9 515 50.9
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 2.3e-144 516.5 521 52.0
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 1.1e-143 514.2 527 51.2
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 2.0e-143 513.5 458 55.5
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 3.3e-143 512.7 499 54.1
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 4.4e-143 512.3 458 55.2
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 5.7e-143 511.9 465 55.9
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 7.4e-143 511.5 519 50.5
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 1.7e-142 510.4 513 53.4
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 2.2e-142 510.0 440 58.2
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 1.4e-141 507.3 522 52.1
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 1.4e-141 507.3 522 52.1
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 1.8e-141 506.9 522 52.3
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 2.4e-141 506.5 483 55.5
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 7.0e-141 505.0 515 52.6
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 2.0e-140 503.4 522 51.5
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 3.5e-140 502.7 518 51.7
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 2.2e-139 500.0 522 51.1
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 3.8e-139 499.2 515 51.1
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 5.0e-139 498.8 435 58.6
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.2e-137 494.2 467 55.5
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 6.1e-137 491.9 518 50.8
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 8.0e-137 491.5 468 53.6
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 1.2e-135 487.6 522 49.8
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 1.2e-135 487.6 466 53.9
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 2.6e-135 486.5 468 53.2
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 9.7e-135 484.6 467 53.3
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 6.3e-134 481.9 542 48.3
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 3.1e-133 479.6 511 50.7
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 2.0e-132 476.9 347 66.6
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 4.5e-132 475.7 513 49.1
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 9.4e-130 468.0 471 50.7
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 3.6e-129 466.1 479 51.4
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 4.7e-129 465.7 488 51.4
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 8.0e-129 464.9 432 55.8
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 1.0e-128 464.5 519 47.2
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 1.4e-128 464.2 517 49.3
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 8.8e-128 461.5 428 54.9
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 1.1e-125 454.5 428 54.2
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 4.1e-125 452.6 515 47.8
Gohir.A03G006700 Gossypium hirsutum HOM05D005741 ORTHO05D007240 6.6e-123 445.3 360 59.7
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 1.5e-122 444.1 499 49.1
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 8.0e-121 438.3 340 62.6
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 1.4e-117 427.6 356 61.0
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.0e-115 421.4 342 62.0
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 3.9e-115 419.5 350 60.0
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 5.1e-99 365.9 282 63.1
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 4.4e-87 326.2 511 38.9
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 3.6e-81 306.6 247 62.3
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 3.8e-78 296.6 503 37.2
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 1.0e-67 261.9 448 37.7
MD06G1054000 Malus domestica HOM05D005741 ORTHO05D007240 1.8e-67 261.2 200 65.0
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 6.7e-67 259.2 205 62.4
Aa31LG6G180 Aethionema arabicum HOM05D005741 ORTHO05D007240 7.4e-66 255.8 256 54.3
QL05p056282 Quercus lobata HOM05D005741 ORTHO05D007240 1.3e-62 245.0 437 36.8
QL05p056241 Quercus lobata HOM05D005741 ORTHO05D007240 2.2e-62 244.2 213 59.2
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 1.3e-57 228.4 495 31.3
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 8.4e-54 215.7 177 57.6
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 1.8e-51 208.0 322 39.1
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.4e-47 193.7 164 56.1
Mapoly0048s0017 Marchantia polymorpha HOM05D005741 ORTHO05D007240 2.0e-42 177.9 481 27.9
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 4.1e-40 170.2 185 48.1
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 8.5e-38 162.5 236 39.0
Glyma.19G032233 Glycine max HOM05D005741 ORTHO05D007240 3.1e-32 144.1 154 50.6
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.5e-29 134.4 333 32.4
vmacro00011 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 2.5e-29 134.4 260 35.4
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 5.7e-26 123.2 112 56.2
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.2e-25 121.3 110 57.3
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.4e-24 118.6 112 53.6
Oeu057691.1 Olea europaea HOM05D005741 ORTHO05D007240 6.8e-19 99.8 73 68.5
Pp3c6_17579 Physcomitrium patens HOM05D005741 ORTHO05D007240 1.2e-18 99.0 76 56.6
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.7e-17 95.1 105 46.7
AL7G37230 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 5.2e-11 73.6 74 50.0
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla HOM05D005741 ORTHO05D228475 7.0e-08 63.2 75 42.7


User provided reference genes

Program Settings