Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 2.5e-67 258.8 149 100.0
SGA_v2.0_scaffold150G36678 Striga asiatica HOM05D011630 ORTHO05D014269 2.3e-60 235.7 149 91.3
SGA_v2.0_scaffold211G42175 Striga asiatica HOM05D011630 ORTHO05D014269 1.7e-31 139.8 131 64.1
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 1.0e-12 77.4 66 56.1
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 1.0e-12 77.4 66 56.1
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 1.0e-12 77.4 66 56.1
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 1.3e-12 77.0 86 40.7
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 2.3e-12 76.3 66 54.5
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 3.9e-12 75.5 66 54.5
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 3.9e-12 75.5 66 54.5
SGA_v2.0_scaffold30G12367 Striga asiatica HOM05D011630 ORTHO05D014269 8.7e-12 74.3 66 54.5
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 1.1e-11 73.9 63 54.0
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 1.9e-11 73.2 66 53.0
SGA_v2.0_scaffold366G50026 Striga asiatica HOM05D011630 ORTHO05D014269 8.1e-10 67.8 49 57.1
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 4.5e-08 62.0 106 34.9
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 9.9e-08 60.8 90 37.8
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 2.2e-07 59.7 88 37.5
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-07 59.3 88 37.5
CiPaw.15G155500 Carya illinoinensis HOM05D007742 ORTHO05D004072 3.8e-07 58.9 72 38.9
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 4.9e-07 58.5 88 36.4
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 8.4e-07 57.8 63 39.7
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-06 57.4 65 44.6
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-06 57.0 88 36.4
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-06 57.0 65 44.6
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-06 57.0 65 44.6
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-06 56.6 88 35.2
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-06 56.6 87 33.3
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-06 56.2 63 39.7
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-06 56.2 149 27.5
Os03g0786500 Oryza sativa ssp. japonica HOM05D008124 ORTHO05D004072 2.4e-06 56.2 48 45.8
Cfa000684 Carpinus fangiana HOM05D008124 ORTHO05D004072 3.2e-06 55.8 60 46.7
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-06 55.8 63 39.7
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-06 55.8 65 44.6
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 3.2e-06 55.8 49 46.9
Haze_06124 Corylus avellana HOM05D008124 ORTHO05D004072 4.2e-06 55.5 65 44.6
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 4.2e-06 55.5 66 36.4
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 5.5e-06 55.1 65 43.1
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 7.1e-06 54.7 88 35.2
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 7.1e-06 54.7 68 38.2
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 7.1e-06 54.7 88 35.2
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 9.3e-06 54.3 49 44.9
SGA_v2.0_scaffold100G29657 Striga asiatica HOM05D001383 ORTHO05D000309 9.3e-06 54.3 53 45.3
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 9.3e-06 54.3 50 42.0


User provided reference genes

Program Settings