Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold199G41179 Striga asiatica HOM05D004613 ORTHO05D006095 9.4e-184 646.7 329 100.0
Migut.B01124 Erythranthe guttata HOM05D004613 ORTHO05D006095 3.8e-76 289.3 310 54.5
MSTRG.20469 Avicennia marina HOM05D004613 ORTHO05D006095 5.9e-69 265.4 311 52.4
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 2.0e-56 223.8 261 52.5
CSS0015750 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.1e-51 208.0 262 49.6
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 4.2e-51 206.1 264 47.3
Atru.chr2.494 Acer truncatum HOM05D004613 ORTHO05D006095 9.4e-51 204.9 261 47.9
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 1.4e-49 201.1 261 46.0
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 1.4e-49 201.1 264 47.0
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 1.4e-49 201.1 265 47.5
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 2.3e-49 200.3 296 46.3
vmacro05035 Vaccinium macrocarpon HOM05D004613 ORTHO05D006095 2.3e-49 200.3 261 48.7
MELO3C015343.2 Cucumis melo HOM05D004613 ORTHO05D006095 5.2e-49 199.1 265 47.2
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 2.6e-48 196.8 261 47.5
CsaV3_1G039190 Cucumis sativus L. HOM05D004613 ORTHO05D006095 2.6e-48 196.8 265 46.4
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 3.3e-48 196.4 264 46.2
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 4.4e-48 196.1 261 47.1
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 7.5e-48 195.3 261 46.7
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 7.5e-48 195.3 265 45.3
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.7e-47 194.1 283 43.8
Lsat_1_v5_gn_8_116060 Lactuca sativa HOM05D004613 ORTHO05D006095 2.2e-47 193.7 275 44.4
Peaxi162Scf00434g00335 Petunia axillaris HOM05D004613 ORTHO05D006095 2.8e-47 193.4 258 45.3
Aqoxy2G03209 Aquilegia oxysepala HOM05D004613 ORTHO05D006095 4.8e-47 192.6 266 45.9
PGR083G0604 Punica granatum HOM05D004613 ORTHO05D006095 8.2e-47 191.8 293 43.7
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.4e-46 191.0 261 46.0
HanXRQChr09g0258721 Helianthus annuus HOM05D004613 ORTHO05D006095 1.8e-46 190.7 264 45.1
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 1.8e-46 190.7 259 46.7
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 2.4e-46 190.3 261 46.0
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 5.3e-46 189.1 261 45.2
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 7.0e-46 188.7 261 44.4
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 7.0e-46 188.7 261 44.4
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 7.0e-46 188.7 259 46.3
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 9.1e-46 188.3 264 44.3
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 9.1e-46 188.3 261 46.7
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 9.1e-46 188.3 259 47.9
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.6e-45 187.6 261 46.7
Solyc01g098630.3 Solanum lycopersicum HOM05D004613 ORTHO05D006095 1.6e-45 187.6 262 44.3
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 2.0e-45 187.2 261 45.2
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 2.7e-45 186.8 263 43.7
Nitab4.5_0004940g0150 Nicotiana tabacum HOM05D004613 ORTHO05D006095 2.7e-45 186.8 280 45.0
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 5.9e-45 185.7 261 45.2
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 5.9e-45 185.7 262 44.7
Sopen01g042180 Solanum pennellii HOM05D004613 ORTHO05D006095 5.9e-45 185.7 262 43.9
Sc09g0003370 Simmondsia chinensis HOM05D004613 ORTHO05D006095 7.7e-45 185.3 261 46.0
CANSAT54G0471 Cannabis sativa HOM05D004613 ORTHO05D006095 1.0e-44 184.9 265 45.3
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 2.2e-44 183.7 263 42.6
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 3.8e-44 183.0 264 43.2
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 5.0e-44 182.6 279 42.7
Lj5g0014952 Lotus japonicus HOM05D004613 ORTHO05D006095 6.5e-44 182.2 264 43.6
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 1.5e-43 181.0 279 42.3
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 1.9e-43 180.6 264 42.4
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 2.5e-43 180.3 259 44.8
Gohir.D08G229400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 2.5e-43 180.3 279 42.3
Dinv40253 Davidia involucrata HOM05D004613 ORTHO05D006095 5.5e-43 179.1 254 45.3
TPR.G2750 Trifolium pratense HOM05D004613 ORTHO05D006095 5.5e-43 179.1 274 43.1
GSVIVG01022058001 Vitis vinifera HOM05D004613 ORTHO05D006095 7.2e-43 178.7 242 43.8
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 9.4e-43 178.3 261 42.9
Glyma.20G231400 Glycine max HOM05D004613 ORTHO05D006095 1.2e-42 177.9 259 43.6
Lj9A681T39 Lonicera japonica HOM05D004613 ORTHO05D006095 1.6e-42 177.6 186 55.9
arahy.Tifrunner.gnm1.ann1.R33V11 Arachis hypogaea HOM05D004613 ORTHO05D006095 8.0e-42 175.3 262 44.7
CDE12G0359 Ceratophyllum demersum HOM05D004613 ORTHO05D006095 8.0e-42 175.3 247 42.1
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 1.4e-41 174.5 261 42.9
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 1.4e-41 174.5 261 42.5
SalBow8G2842 Salvia bowleyana HOM05D004613 ORTHO05D006095 4.0e-41 172.9 340 37.6
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 5.2e-41 172.6 261 42.1
COL.COLO4_13522 Corchorus olitorius HOM05D004613 ORTHO05D006095 5.2e-41 172.6 259 43.6
DCAR_015964 Daucus carota HOM05D004613 ORTHO05D006095 6.8e-41 172.2 261 42.9
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 1.5e-40 171.0 261 41.4
Glyma.10G157300 Glycine max HOM05D004613 ORTHO05D006095 2.6e-40 170.2 261 41.8
Oeu012099.1 Olea europaea HOM05D004613 ORTHO05D006095 3.4e-40 169.9 173 53.8
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 7.5e-40 168.7 262 43.1
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 7.5e-40 168.7 261 41.4
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 1.7e-39 167.5 261 42.5
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 2.2e-39 167.2 249 45.0
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 3.7e-39 166.4 264 40.5
Medtr1g082380 Medicago truncatula HOM05D004613 ORTHO05D006095 6.3e-39 165.6 261 38.3
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 6.3e-39 165.6 244 43.9
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 8.3e-39 165.2 261 41.4
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 1.8e-38 164.1 264 40.9
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 1.8e-38 164.1 261 40.6
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 4.1e-38 162.9 261 41.0
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 5.4e-38 162.5 277 39.7
Lalb_Chr02g0148411 Lupinus albus HOM05D004613 ORTHO05D006095 7.0e-38 162.2 264 40.9
arahy.Tifrunner.gnm1.ann1.LT91QM Arachis hypogaea HOM05D004613 ORTHO05D006095 9.1e-38 161.8 286 40.9
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 1.6e-37 161.0 264 40.2
HPP92_006941 Vanilla planifolia HOM05D004613 ORTHO05D006095 2.0e-37 160.6 278 39.6
Zm00001eb329390 Zea mays HOM05D004613 ORTHO05D006095 5.9e-37 159.1 256 39.8
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 1.5e-35 154.5 158 55.1
PGR083G1611 Punica granatum HOM05D004613 ORTHO05D006095 1.6e-34 151.0 281 39.5
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 2.8e-34 150.2 161 52.2
SHI18214 Sapria himalayana HOM05D004613 ORTHO05D006095 2.8e-34 150.2 191 46.6
Cc02_g32610 Coffea canephora HOM05D004613 ORTHO05D006095 7.5e-32 142.1 166 48.2
ClCG03G016790 Citrullus lanatus HOM05D000665 ORTHO05D006095 8.3e-31 138.7 367 34.6
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 1.4e-30 137.9 265 37.4
PGSC0003DMG400028600 Solanum tuberosum HOM05D004613 ORTHO05D006095 1.6e-29 134.4 158 48.1
CAN.G1134.17 Capsicum annuum HOM05D004613 ORTHO05D006095 5.9e-29 132.5 158 47.5
AUR62005113 Chenopodium quinoa HOM05D004613 ORTHO05D006095 4.3e-27 126.3 165 47.3
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 4.0e-25 119.8 261 34.9
AUR62000861 Chenopodium quinoa HOM05D004613 ORTHO05D006095 2.0e-24 117.5 165 44.8
Mapoly0007s0105 Marchantia polymorpha HOM05D004613 ORTHO05D006095 7.5e-24 115.5 260 31.5
SEGI_25140 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 9.8e-24 115.2 225 37.3
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 4.9e-23 112.8 195 39.0
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 7.0e-22 109.0 201 42.8
SMO115G0217 Selaginella moellendorffii HOM05D004613 ORTHO05D006095 6.0e-21 105.9 199 37.2
Pp3c24_5170 Physcomitrium patens HOM05D004613 ORTHO05D006095 2.3e-17 94.0 184 34.2
CBR_g37761 Chara braunii HOM05D004613 ORTHO05D006095 8.9e-17 92.0 186 32.3
unitig_747.g21346 Utricularia gibba HOM05D004613 ORTHO05D006095 7.5e-16 89.0 173 37.0
unitig_747.g21345 Utricularia gibba HOM05D004613 ORTHO05D006095 1.9e-14 84.3 62 71.0
MD04G1209900 Malus domestica HOM05D004613 ORTHO05D006095 9.2e-14 82.0 45 86.7
A09p05250 Brassica napus HOM05D004613 ORTHO05D006095 9.5e-11 72.0 46 78.3
Cc02_g32600 Coffea canephora HOM05D004613 ORTHO05D006095 3.6e-10 70.1 45 68.9
AagrBONN_evm.TU.Sc2ySwM_117.373 Anthoceros agrestis HOM05D004613 ORTHO05D006095 1.7e-07 61.2 52 55.8


User provided reference genes

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