Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 5.5e-181 637.5 316 100.0
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 1.1e-99 367.5 257 69.6
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 4.0e-99 365.5 328 59.1
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.6e-92 342.4 307 60.9
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.1e-91 339.3 307 60.3
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 4.0e-91 339.0 298 57.4
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.5e-90 337.0 300 57.7
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 7.6e-90 334.7 257 62.3
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 1.3e-89 334.0 297 57.2
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 2.2e-89 333.2 315 56.5
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.4e-88 330.5 306 60.5
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 1.9e-88 330.1 298 55.7
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 3.2e-88 329.3 311 56.3
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 1.2e-87 327.4 300 55.0
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 1.6e-87 327.0 316 53.8
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 4.6e-87 325.5 311 54.0
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 7.8e-87 324.7 324 54.3
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.9e-86 322.4 287 55.7
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 5.1e-86 322.0 324 50.9
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.7e-86 321.2 288 55.2
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.5e-85 320.5 301 54.5
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.5e-85 320.5 231 67.5
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 1.9e-85 320.1 301 54.2
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.9e-85 320.1 301 54.2
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 2.5e-85 319.7 255 60.4
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 9.6e-85 317.8 291 55.7
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 1.6e-84 317.0 357 49.0
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 2.1e-84 316.6 335 51.3
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 8.1e-84 314.7 257 60.7
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 8.1e-84 314.7 270 57.8
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 1.8e-83 313.5 311 54.0
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 4.0e-83 312.4 325 51.4
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 6.9e-83 311.6 324 50.3
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.5e-82 310.5 315 51.7
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 2.6e-82 309.7 293 54.6
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 3.4e-82 309.3 315 52.7
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 5.8e-82 308.5 305 54.4
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 1.3e-81 307.4 284 55.3
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.2e-81 306.6 315 51.1
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.8e-81 305.8 315 51.4
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 4.9e-81 305.4 323 50.5
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 6.4e-81 305.1 255 56.5
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 8.4e-81 304.7 289 51.9
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.1e-80 304.3 339 49.9
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.9e-80 303.5 324 50.9
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 4.6e-79 298.9 229 64.2
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 6.0e-79 298.5 257 55.3
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.0e-78 297.7 305 51.1
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.0e-78 297.7 287 54.0
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.0e-78 297.7 282 54.6
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.7e-78 297.0 305 51.1
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 3.0e-78 296.2 255 55.7
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 5.1e-78 295.4 308 50.6
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.9e-77 293.5 305 50.8
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 2.5e-77 293.1 320 47.8
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 5.6e-77 292.0 255 54.9
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 9.6e-77 291.2 266 52.3
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 4.8e-76 288.9 299 51.2
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 6.2e-76 288.5 285 50.9
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 6.9e-75 285.0 300 47.7
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 1.2e-74 284.3 304 50.0
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 1.5e-74 283.9 288 48.3
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 2.0e-74 283.5 293 48.1
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 4.5e-74 282.3 315 47.3
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 4.5e-74 282.3 305 49.8
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 5.8e-74 282.0 326 46.6
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 9.9e-74 281.2 320 45.9
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 9.9e-74 281.2 272 52.9
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 1.3e-73 280.8 304 49.3
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 1.7e-73 280.4 300 47.0
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 2.2e-73 280.0 292 48.3
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 2.9e-73 279.6 305 46.6
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 2.9e-73 279.6 288 49.0
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 4.9e-73 278.9 313 49.8
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 8.4e-73 278.1 264 52.7
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 8.4e-73 278.1 323 46.1
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 8.4e-73 278.1 323 46.1
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.9e-72 276.9 296 49.7
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 1.9e-72 276.9 282 50.4
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 3.2e-72 276.2 290 47.6
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 5.4e-72 275.4 313 45.7
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 7.1e-72 275.0 211 63.5
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 9.3e-72 274.6 293 46.4
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.9e-69 266.9 255 54.1
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 4.3e-69 265.8 257 51.8
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 2.8e-68 263.1 283 48.1
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 3.7e-68 262.7 306 46.4
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 4.8e-68 262.3 281 48.4
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.4e-67 260.0 327 45.6
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.3e-65 254.2 265 49.4
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.7e-65 253.8 310 43.9
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 3.8e-65 252.7 273 52.4
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 3.0e-62 243.0 288 44.1
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 5.3e-59 232.3 265 45.7
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 9.3e-56 221.5 267 44.9
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 4.8e-44 182.6 221 42.5
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.0e-41 174.9 130 61.5
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 4.7e-39 166.0 140 62.1
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 3.1e-35 153.3 282 34.8
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 2.6e-29 133.7 149 49.0
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 1.3e-28 131.3 237 34.2
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 7.0e-27 125.6 125 54.4
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 2.9e-25 120.2 128 43.8
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 2.0e-21 107.5 174 35.6
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 1.4e-19 101.3 101 53.5
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 4.1e-19 99.8 115 47.8
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 4.1e-19 99.8 101 52.5
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 2.7e-18 97.1 87 57.5
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.5e-13 81.3 142 33.1
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 1.6e-10 71.2 111 37.8
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 3.5e-10 70.1 57 59.6
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 1.3e-09 68.2 103 38.8
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 2.9e-09 67.0 223 24.7
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 2.1e-07 60.8 48 58.3
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 8.0e-07 58.9 38 76.3
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 1.8e-06 57.8 38 73.7


User provided reference genes

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