Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 2.4e-184 648.7 324 100.0
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 4.0e-102 375.6 222 82.9
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 1.1e-96 357.5 223 79.8
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 2.2e-92 343.2 223 74.9
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 6.2e-79 298.5 217 65.4
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 8.9e-78 294.7 229 61.6
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 5.8e-77 292.0 218 63.8
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 9.8e-77 291.2 213 65.3
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.4e-75 287.3 217 65.4
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.4e-75 287.3 220 60.5
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 1.4e-75 287.3 223 62.3
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 4.1e-75 285.8 209 65.6
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.2e-74 284.3 217 65.4
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 2.1e-74 283.5 215 64.2
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 3.5e-74 282.7 213 65.7
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 3.5e-74 282.7 215 63.3
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 3.5e-74 282.7 237 60.3
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 4.6e-74 282.3 213 62.4
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 4.6e-74 282.3 217 65.0
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 1.7e-73 280.4 224 59.4
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.7e-73 280.4 216 60.6
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 2.3e-73 280.0 218 61.5
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 2.3e-73 280.0 226 60.6
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 3.9e-73 279.3 213 64.3
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.9e-73 279.3 227 58.6
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 5.1e-73 278.9 212 64.6
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 6.6e-73 278.5 233 57.5
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 1.1e-72 277.7 218 61.9
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.9e-72 276.9 227 58.1
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 2.5e-72 276.6 225 59.6
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 3.3e-72 276.2 221 61.1
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 4.3e-72 275.8 218 61.9
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 7.3e-72 275.0 216 62.0
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 7.3e-72 275.0 224 58.9
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 1.2e-71 274.2 211 61.1
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.2e-71 274.2 223 58.7
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 1.2e-71 274.2 215 62.3
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 2.1e-71 273.5 224 58.9
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 2.1e-71 273.5 222 58.6
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 2.1e-71 273.5 216 59.7
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 3.6e-71 272.7 216 59.3
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 4.7e-71 272.3 217 63.1
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 4.7e-71 272.3 226 59.3
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 4.7e-71 272.3 217 63.1
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 6.2e-71 271.9 227 57.7
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 8.1e-71 271.6 212 62.7
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 2.3e-70 270.0 222 57.2
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 3.1e-70 269.6 217 59.0
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 3.1e-70 269.6 218 59.2
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 3.1e-70 269.6 191 68.6
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 5.2e-70 268.9 209 62.7
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 6.8e-70 268.5 227 58.6
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 8.9e-70 268.1 211 59.7
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 1.5e-69 267.3 213 61.0
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 2.6e-69 266.5 217 59.4
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 5.8e-69 265.4 217 59.4
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 5.8e-69 265.4 226 58.0
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 7.6e-69 265.0 211 61.6
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 7.6e-69 265.0 216 57.4
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 9.9e-69 264.6 211 61.1
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 2.2e-68 263.5 217 59.4
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 3.7e-68 262.7 211 60.7
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 3.7e-68 262.7 218 58.3
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 4.9e-68 262.3 216 56.9
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 6.4e-68 261.9 226 56.6
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 8.3e-68 261.5 212 61.3
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 8.3e-68 261.5 223 57.4
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 1.4e-67 260.8 223 57.4
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 5.4e-67 258.8 244 52.0
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 5.4e-67 258.8 228 54.8
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 7.1e-67 258.5 212 59.9
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 1.2e-66 257.7 217 59.0
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.7e-66 256.5 209 59.8
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 6.0e-66 255.4 211 56.9
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 7.8e-66 255.0 211 56.4
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 7.8e-66 255.0 238 55.0
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.7e-65 253.8 215 58.6
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 6.6e-65 251.9 226 55.3
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 1.5e-64 250.8 215 56.3
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 2.5e-64 250.0 207 62.3
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 7.3e-64 248.4 216 54.2
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 1.6e-63 247.3 211 55.5
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 2.8e-63 246.5 215 54.4
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 3.1e-62 243.0 215 54.4
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 6.8e-62 241.9 215 53.0
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.5e-61 240.7 215 57.2
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 2.6e-61 240.0 218 51.4
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 2.6e-61 240.0 216 52.8
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 3.4e-61 239.6 268 48.9
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 5.8e-61 238.8 216 52.3
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 5.8e-61 238.8 216 52.3
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 5.8e-61 238.8 216 52.3
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 7.6e-61 238.4 216 53.2
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 7.6e-61 238.4 217 53.5
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.1e-59 234.6 213 53.5
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.9e-59 233.8 213 53.5
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 7.1e-59 231.9 217 50.7
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 3.5e-58 229.6 215 54.4
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 7.8e-58 228.4 190 56.8
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 3.0e-57 226.5 219 53.0
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 2.1e-55 220.3 214 52.3
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 5.3e-54 215.7 143 72.0
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 3.4e-53 213.0 156 65.4
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 3.3e-48 196.4 138 71.0
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 4.3e-48 196.1 149 65.8
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 3.1e-46 189.9 214 45.8
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.0e-46 189.5 144 63.9
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 9.0e-46 188.3 143 62.9
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.3e-40 169.9 214 45.3
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 4.5e-37 159.5 123 61.8
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 7.6e-37 158.7 115 66.1
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 3.3e-24 116.7 191 35.6
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 2.8e-15 87.0 222 28.8
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 4.5e-13 79.7 118 36.4
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 9.4e-11 72.0 214 31.3


User provided reference genes

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