Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold198G41102 Striga asiatica HOM05D006292 ORTHO05D006110 1.6e-67 259.2 124 100.0
MSTRG.12158 Avicennia marina HOM05D006292 ORTHO05D006110 4.1e-23 111.7 122 50.8
SalBow6G3663 Salvia bowleyana HOM05D006292 ORTHO05D006110 1.7e-16 89.7 98 52.0
Peaxi162Scf00045g00010 Petunia axillaris HOM05D006292 ORTHO05D006110 1.8e-15 86.3 97 49.5
Oeu017028.1 Olea europaea HOM05D006292 ORTHO05D006110 7.0e-15 84.3 98 49.0
SGA_v2.0_scaffold6G03157 Striga asiatica HOM05D006292 ORTHO05D006110 5.0e-13 78.2 124 44.4
Hma1.2p1_2704F.1_g327130 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 2.5e-12 75.9 116 40.5
Hma1.2p1_1063F.1_g253570 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 1.2e-11 73.6 116 39.7
unitig_32.g10895 Utricularia gibba HOM05D006292 ORTHO05D006110 4.7e-11 71.6 128 42.2
Dinv25216 Davidia involucrata HOM05D000567 ORTHO05D000767 1.0e-10 70.5 99 47.5
PGSC0003DMG400001160 Solanum tuberosum HOM05D006292 ORTHO05D006110 1.0e-10 70.5 96 41.7
Potri.003G092100 Populus trichocarpa HOM05D006292 ORTHO05D006110 1.8e-10 69.7 120 40.8
Cc08_g02780 Coffea canephora HOM05D006292 ORTHO05D006110 8.8e-10 67.4 118 40.7
Solyc08g005040.1 Solanum lycopersicum HOM05D006292 ORTHO05D006110 1.2e-09 67.0 125 36.0
CSS0029921 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 2.0e-09 66.2 122 38.5
CSS0047178 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 2.0e-09 66.2 122 38.5
vmacro00329 Vaccinium macrocarpon HOM05D006292 ORTHO05D006110 2.0e-09 66.2 128 36.7
Sopen08g001060 Solanum pennellii HOM05D006292 ORTHO05D006110 5.7e-09 64.7 125 36.0
Rhsim07G0127000 Rhododendron simsii HOM05D006292 ORTHO05D006110 2.2e-08 62.8 125 39.2
Sopen08g025520 Solanum pennellii HOM05D006292 ORTHO05D006110 2.2e-08 62.8 124 36.3
Solyc08g076940.1 Solanum lycopersicum HOM05D006292 ORTHO05D006110 2.8e-08 62.4 124 36.3
Migut.A01008 Erythranthe guttata HOM05D006292 ORTHO05D006110 3.7e-08 62.0 103 41.7
Thhalv10001070m.g Eutrema salsugineum HOM05D011808 ORTHO05D006110 1.4e-07 60.1 81 45.7
Actinidia14806 Actinidia chinensis HOM05D000567 ORTHO05D000767 2.4e-07 59.3 93 41.9
Cpa.g.sc1778.1 Carica papaya HOM05D006292 ORTHO05D006110 3.1e-07 58.9 119 35.3
Nn1g08042 Nelumbo nucifera HOM05D006292 ORTHO05D006110 4.1e-07 58.5 96 40.6
Atru.chr6.1708 Acer truncatum HOM05D006292 ORTHO05D006110 7.0e-07 57.8 120 39.2
TAR636G3028 Trochodendron aralioides HOM05D006292 ORTHO05D006110 7.0e-07 57.8 124 36.3
Lalb_Chr09g0325661 Lupinus albus HOM05D006292 ORTHO05D006110 1.6e-06 56.6 114 34.2
TWI60G0215 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 1.6e-06 56.6 120 34.2
Aqoxy3G02346 Aquilegia oxysepala HOM05D006292 ORTHO05D006110 2.0e-06 56.2 83 42.2
Sopen06g021400 Solanum pennellii HOM05D006292 ORTHO05D006110 2.0e-06 56.2 100 39.0
Gohir.D09G193100 Gossypium hirsutum HOM05D006292 ORTHO05D006110 2.7e-06 55.8 84 42.9
Lalb_Chr16g0381361 Lupinus albus HOM05D006292 ORTHO05D006110 3.5e-06 55.5 114 34.2
Peaxi162Scf00460g00032 Petunia axillaris HOM05D006292 ORTHO05D006110 3.5e-06 55.5 86 39.5
Potri.001G142250 Populus trichocarpa HOM05D006292 ORTHO05D006110 3.5e-06 55.5 118 36.4
Gohir.A09G201400 Gossypium hirsutum HOM05D006292 ORTHO05D006110 4.5e-06 55.1 84 41.7
AL8G11570 Arabidopsis lyrata HOM05D011808 ORTHO05D006110 7.7e-06 54.3 81 40.7
Ciclev10013401m.g Citrus clementina HOM05D006292 ORTHO05D006110 7.7e-06 54.3 116 33.6
FvH4_5g22090 Fragaria vesca HOM05D006292 ORTHO05D006110 7.7e-06 54.3 122 34.4


User provided reference genes

Program Settings