Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold198G41086 Striga asiatica HOM05D010243 ORTHO05D012264 3.4e-121 438.3 220 100.0
SGA_v2.0_scaffold59G20676 Striga asiatica HOM05D010243 ORTHO05D012264 2.9e-11 73.2 68 64.7
HanXRQChr08g0208451 Helianthus annuus HOM05D010243 ORTHO05D012264 4.1e-10 69.3 59 62.7
Os02g0189700 Oryza sativa ssp. japonica HOM05D010243 ORTHO05D012264 9.2e-10 68.2 69 56.5
MELO3C031016.2 Cucumis melo HOM05D010243 ORTHO05D012264 1.7e-08 63.9 65 56.9
Oeu004355.1 Olea europaea HOM05D010243 ORTHO05D012264 1.7e-08 63.9 62 56.5
Pp3c22_11245 Physcomitrium patens HOM05D010243 ORTHO05D012264 3.9e-08 62.8 47 68.1
Solyc11g150103.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 8.6e-08 61.6 66 53.0
Migut.M00965 Erythranthe guttata HOM05D010243 ORTHO05D012264 5.6e-07 58.9 50 60.0
Nitab4.5_0002072g0010 Nicotiana tabacum HOM05D010243 ORTHO05D012264 7.3e-07 58.5 66 51.5
Carub.0004s1877 Capsella rubella HOM05D010243 ORTHO05D012264 9.5e-07 58.2 47 63.8
Carub.0005s0741 Capsella rubella HOM05D010243 ORTHO05D012264 1.6e-06 57.4 50 58.0
FAN03G1987 Fragaria x ananassa HOM05D010243 ORTHO05D012264 3.6e-06 56.2 63 54.0
Haze_00001 Corylus avellana HOM05D000068 ORTHO05D000084 4.7e-06 55.8 45 64.4
Migut.J00653 Erythranthe guttata HOM05D010243 ORTHO05D012264 4.7e-06 55.8 54 55.6
Nitab4.5_0006969g0020 Nicotiana tabacum HOM05D010243 ORTHO05D012264 6.2e-06 55.5 57 59.6


User provided reference genes

Program Settings