Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 3.8e-103 378.3 200 100.0
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 5.1e-100 367.9 200 96.5
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 2.0e-80 302.8 201 79.1
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 2.2e-79 299.3 201 77.1
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 1.4e-78 296.6 200 77.5
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 5.3e-73 278.1 199 70.9
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 5.3e-73 278.1 183 77.6
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 3.8e-71 271.9 184 76.6
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 1.4e-70 270.0 179 76.0
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.4e-70 270.0 185 73.5
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 3.2e-70 268.9 186 73.1
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 4.2e-70 268.5 185 72.4
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 5.5e-70 268.1 183 74.3
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 7.2e-70 267.7 185 73.0
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 7.2e-70 267.7 185 72.4
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 7.2e-70 267.7 186 71.5
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 9.4e-70 267.3 185 73.0
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 1.2e-69 266.9 180 74.4
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.2e-69 266.9 185 70.8
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 1.6e-69 266.5 197 68.0
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 2.1e-69 266.2 199 69.8
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 6.1e-69 264.6 185 71.4
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 1.4e-68 263.5 200 69.5
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 1.8e-68 263.1 185 71.4
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 2.3e-68 262.7 199 70.9
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 2.3e-68 262.7 184 71.7
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 3.0e-68 262.3 180 73.3
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 8.8e-68 260.8 177 72.9
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.1e-67 260.4 215 66.0
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 1.5e-67 260.0 204 68.6
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 1.5e-67 260.0 180 72.8
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 2.0e-67 259.6 180 73.3
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 3.3e-67 258.8 180 72.8
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 1.3e-66 256.9 168 76.2
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 1.3e-66 256.9 174 72.4
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 2.2e-66 256.1 197 68.5
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 2.8e-66 255.8 184 70.1
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 8.2e-66 254.2 226 61.9
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.8e-65 253.1 177 70.1
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 2.4e-65 252.7 199 69.3
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 4.1e-65 251.9 183 69.9
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 5.3e-65 251.5 199 68.8
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 7.0e-65 251.1 190 67.4
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 7.0e-65 251.1 198 66.2
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 4.5e-64 248.4 197 65.5
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 1.0e-63 247.3 197 65.0
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 2.9e-63 245.7 180 68.9
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 5.0e-63 245.0 170 74.1
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 5.0e-63 245.0 198 64.6
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 5.0e-63 245.0 189 65.6
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 6.5e-63 244.6 182 70.3
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 8.5e-63 244.2 184 66.8
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 3.2e-62 242.3 193 66.8
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 5.5e-62 241.5 184 66.3
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 9.4e-62 240.7 195 64.6
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.6e-61 240.0 159 74.8
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 2.1e-61 239.6 208 60.6
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 4.7e-61 238.4 191 62.8
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 6.1e-61 238.0 159 74.2
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 8.0e-61 237.7 156 75.0
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 1.0e-60 237.3 183 63.9
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 1.0e-60 237.3 191 62.8
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 1.0e-60 237.3 186 63.4
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.4e-60 236.9 201 59.7
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 1.4e-60 236.9 185 63.2
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 3.0e-60 235.7 183 65.6
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 4.0e-60 235.3 183 63.4
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 4.0e-60 235.3 158 75.3
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 5.2e-60 235.0 154 76.0
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 5.2e-60 235.0 208 61.1
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 5.2e-60 235.0 183 65.6
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 6.7e-60 234.6 188 61.7
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 8.8e-60 234.2 204 58.3
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 1.5e-59 233.4 191 61.8
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 2.6e-59 232.6 214 59.3
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 2.6e-59 232.6 199 61.8
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 3.3e-59 232.3 186 62.4
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 4.4e-59 231.9 185 63.8
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 4.4e-59 231.9 154 76.6
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.3e-58 230.3 176 67.6
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 1.7e-58 229.9 198 58.1
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 2.8e-58 229.2 174 67.8
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 4.8e-58 228.4 152 73.7
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 7.0e-57 224.6 154 74.7
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 9.1e-57 224.2 202 58.4
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.0e-55 220.7 149 73.2
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.2e-55 219.5 157 70.7
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 2.9e-55 219.2 186 64.0
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 3.8e-55 218.8 150 76.0
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 1.6e-53 213.4 185 57.3
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.6e-53 213.4 150 68.7
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 3.6e-53 212.2 151 70.9
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 4.0e-52 208.8 194 59.3
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 5.2e-52 208.4 195 57.4
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 6.3e-50 201.4 156 60.9
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 7.7e-48 194.5 166 58.4
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.7e-48 194.5 149 62.4
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.9e-46 189.9 198 55.6
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 4.4e-43 178.7 122 73.8
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 6.3e-42 174.9 184 52.2
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 3.4e-35 152.5 183 44.8
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 2.2e-34 149.8 175 51.4
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.2e-34 149.8 146 58.9
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.6e-32 143.7 181 45.3
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.7e-32 142.9 104 70.2
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 2.3e-31 139.8 175 44.6
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 4.7e-29 132.1 90 68.9
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 7.5e-27 124.8 171 43.9
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 3.7e-26 122.5 93 65.6
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 3.7e-26 122.5 86 69.8
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 2.4e-25 119.8 79 72.2
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 3.3e-22 109.4 82 69.5
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 1.2e-19 100.9 74 71.6
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.0e-19 100.1 71 69.0
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 7.1e-17 91.7 240 30.0
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 2.1e-16 90.1 65 61.5
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 2.7e-16 89.7 99 53.5
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 4.3e-14 82.4 61 65.6
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 1.8e-12 77.0 56 66.1
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 2.4e-12 76.6 85 56.5
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 7.6e-11 71.6 106 39.6
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 7.1e-09 65.1 67 46.3
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 1.0e-07 61.2 98 41.8


User provided reference genes

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