Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 7.6e-104 380.6 200 100.0
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 3.9e-100 368.2 200 96.5
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 2.4e-81 305.8 201 79.6
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 5.3e-81 304.7 201 78.1
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 2.9e-79 298.9 200 78.0
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 3.7e-74 282.0 199 71.9
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 3.7e-74 282.0 183 78.1
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 6.9e-73 277.7 184 77.2
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 7.7e-72 274.2 185 74.1
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 7.7e-72 274.2 179 77.1
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 1.0e-71 273.9 185 74.1
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 1.3e-71 273.5 180 75.6
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.7e-71 273.1 185 73.5
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.7e-71 273.1 186 72.0
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.2e-71 272.7 186 73.7
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 2.2e-71 272.7 183 75.4
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.9e-71 272.3 185 73.5
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 2.9e-71 272.3 199 70.9
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 8.5e-71 270.8 197 68.5
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 8.5e-71 270.8 185 73.0
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.5e-70 269.2 185 72.4
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 3.2e-70 268.9 180 74.4
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 5.5e-70 268.1 185 70.3
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 9.4e-70 267.3 184 72.8
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 1.6e-69 266.5 200 70.0
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 1.6e-69 266.5 180 73.9
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 2.1e-69 266.2 180 74.4
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 2.7e-69 265.8 185 71.9
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 2.7e-69 265.8 177 73.4
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 3.6e-69 265.4 180 73.9
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 7.9e-69 264.2 204 69.1
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 1.8e-68 263.1 199 70.9
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.8e-68 263.1 215 66.5
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 6.7e-68 261.2 168 76.8
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 6.7e-68 261.2 174 73.0
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 8.8e-68 260.8 184 71.2
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 2.6e-67 259.2 177 71.2
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 3.3e-67 258.8 183 71.6
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 4.4e-67 258.5 199 70.4
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 9.7e-67 257.3 197 68.5
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 9.7e-67 257.3 199 69.8
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 1.3e-66 256.9 190 68.9
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 1.3e-66 256.9 226 61.9
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 2.8e-66 255.8 197 67.0
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 6.3e-66 254.6 197 66.5
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 8.2e-66 254.2 198 66.7
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 3.1e-65 252.3 198 66.2
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 4.1e-65 251.9 189 66.7
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 7.7e-64 247.7 170 74.1
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 7.7e-64 247.7 182 70.9
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.3e-63 246.9 208 61.5
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 1.7e-63 246.5 180 68.9
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 3.8e-63 245.4 184 66.8
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 3.8e-63 245.4 184 66.8
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.5e-63 244.6 159 76.1
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 6.5e-63 244.6 193 66.8
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 1.1e-62 243.8 195 65.1
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 1.9e-62 243.0 159 75.5
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 3.2e-62 242.3 156 76.3
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 1.2e-61 240.4 191 63.4
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 1.2e-61 240.4 183 66.7
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 1.6e-61 240.0 158 75.9
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 2.1e-61 239.6 154 76.6
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 2.7e-61 239.2 183 64.5
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 2.7e-61 239.2 183 64.5
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 2.7e-61 239.2 191 63.4
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 2.7e-61 239.2 186 64.0
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 3.6e-61 238.8 201 60.2
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 6.1e-61 238.0 185 65.4
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 8.0e-61 237.7 154 77.3
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 8.0e-61 237.7 185 63.2
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.0e-60 237.3 176 69.3
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.8e-60 236.5 188 62.2
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 2.3e-60 236.1 204 58.8
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 2.3e-60 236.1 174 69.0
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 4.0e-60 235.3 191 62.3
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 6.7e-60 234.6 198 59.1
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 8.8e-60 234.2 186 62.9
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 8.8e-60 234.2 183 65.6
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 1.5e-59 233.4 208 61.1
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 1.5e-59 233.4 199 61.8
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 3.3e-59 232.3 152 74.3
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 9.7e-59 230.7 214 59.3
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.3e-58 230.3 154 75.3
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 3.1e-57 225.7 157 72.6
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 4.1e-57 225.3 202 58.4
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.2e-56 223.8 149 73.8
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 3.5e-56 222.2 152 76.3
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 8.5e-55 217.6 186 64.0
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 4.2e-54 215.3 185 57.8
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 5.5e-54 214.9 150 68.7
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 1.2e-53 213.8 194 60.3
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 2.1e-53 213.0 151 70.2
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 4.7e-53 211.8 195 58.5
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 1.8e-49 199.9 156 60.9
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 1.6e-48 196.8 166 59.0
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.7e-47 193.4 149 61.7
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.9e-46 189.9 198 56.1
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 3.0e-44 182.6 122 73.8
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.5e-43 180.3 184 54.3
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 9.8e-35 151.0 175 50.9
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 9.8e-35 151.0 183 44.8
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.7e-34 150.2 146 58.9
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.0e-32 143.3 104 70.2
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 2.7e-32 142.9 181 45.3
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 1.7e-31 140.2 175 45.7
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 9.5e-30 134.4 90 68.9
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 3.4e-27 125.9 93 67.7
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 2.9e-26 122.9 171 43.3
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 3.7e-26 122.5 86 68.6
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 1.1e-25 120.9 79 72.2
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.6e-21 107.1 82 67.1
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 8.9e-20 101.3 74 71.6
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 4.4e-19 99.0 71 66.2
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 6.4e-18 95.1 241 31.1
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.9e-17 93.6 99 54.5
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 2.1e-16 90.1 74 56.8
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.3e-15 87.4 61 72.1
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 8.1e-13 78.2 56 67.9
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 2.4e-12 76.6 106 42.5
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 4.0e-12 75.9 85 55.3
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 1.3e-07 60.8 98 41.8
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 1.3e-07 60.8 67 43.3


User provided reference genes

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