Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 5.2e-287 990.3 499 100.0
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 2.9e-128 463.0 499 55.1
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 2.5e-127 459.9 498 54.0
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.2e-126 457.6 502 55.6
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 1.4e-69 268.1 453 40.8
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 2.3e-64 250.8 461 39.7
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 6.2e-62 242.7 221 63.3
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 6.2e-62 242.7 297 50.2
Migut.N01879 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.4e-58 230.7 281 51.2
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 2.7e-57 227.3 494 37.9
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.7e-56 224.6 542 36.5
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 2.3e-56 224.2 402 40.8
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 7.3e-55 219.2 403 40.9
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 2.1e-54 217.6 441 38.1
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 1.1e-53 215.3 235 53.2
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 5.2e-53 213.0 546 34.1
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 2.0e-52 211.1 425 38.8
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 5.8e-52 209.5 521 35.7
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 1.3e-51 208.4 502 36.9
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 1.1e-50 205.3 290 46.6
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 3.2e-50 203.8 446 37.9
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 3.2e-50 203.8 539 34.5
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.1e-49 201.1 516 36.6
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 2.7e-49 200.7 523 35.0
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 1.0e-48 198.7 502 35.1
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 1.0e-48 198.7 526 35.0
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 3.0e-48 197.2 396 39.9
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 3.9e-48 196.8 461 38.0
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 1.5e-47 194.9 389 37.3
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 9.6e-47 192.2 505 34.1
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 9.6e-47 192.2 501 36.9
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 8.1e-46 189.1 443 37.5
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 1.4e-45 188.3 530 34.7
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.8e-45 188.0 404 38.6
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 3.1e-45 187.2 209 50.7
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 4.0e-45 186.8 488 33.8
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 4.0e-45 186.8 480 35.0
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 6.9e-45 186.0 393 39.2
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 1.2e-44 185.3 500 33.8
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.2e-44 185.3 503 36.0
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.2e-43 181.0 407 38.6
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 2.9e-43 180.6 503 35.6
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 8.4e-43 179.1 505 34.1
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 1.9e-42 177.9 247 45.7
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 4.2e-42 176.8 297 41.4
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 7.1e-42 176.0 537 33.1
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 9.3e-42 175.6 490 33.1
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 2.7e-41 174.1 468 34.8
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 6.0e-41 172.9 549 34.1
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 6.0e-41 172.9 426 35.4
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.7e-40 171.4 560 31.2
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 6.6e-40 169.5 424 36.3
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 6.6e-40 169.5 560 31.4
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 1.5e-39 168.3 560 31.4
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 4.3e-39 166.8 529 33.6
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 9.6e-39 165.6 445 36.0
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 9.6e-39 165.6 501 34.7
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 2.1e-38 164.5 449 35.4
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 2.8e-38 164.1 460 35.0
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 3.6e-38 163.7 446 35.0
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 6.2e-38 162.9 407 35.4
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 8.1e-38 162.5 440 35.2
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 1.1e-37 162.2 531 32.0
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 9.0e-37 159.1 555 31.2
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 4.5e-36 156.8 577 31.0
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 5.8e-36 156.4 389 36.5
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 9.9e-36 155.6 372 36.0
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 9.9e-36 155.6 548 31.4
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 9.9e-36 155.6 420 33.1
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 1.3e-35 155.2 321 38.3
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.3e-35 155.2 289 40.5
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 2.9e-35 154.1 506 33.2
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 4.9e-35 153.3 322 38.2
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 8.4e-35 152.5 323 38.1
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 1.1e-34 152.1 324 38.6
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 1.9e-34 151.4 449 33.9
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 4.2e-34 150.2 290 40.3
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 7.1e-34 149.4 478 32.6
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 1.6e-33 148.3 226 42.5
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 1.6e-33 148.3 509 33.2
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 2.1e-33 147.9 296 39.2
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 2.7e-33 147.5 545 31.0
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 3.5e-33 147.1 272 43.4
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.3e-32 145.2 369 34.7
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.8e-32 144.8 269 41.3
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 2.3e-32 144.4 498 34.1
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 3.0e-32 144.1 210 43.3
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 3.9e-32 143.7 542 30.4
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 5.1e-32 143.3 309 38.2
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 1.1e-31 142.1 425 35.5
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 9.6e-31 139.0 512 31.1
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 4.5e-28 130.2 156 50.0
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 1.1e-26 125.6 252 38.5
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.9e-26 124.8 319 34.8
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 3.2e-26 124.0 487 29.4
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 9.3e-26 122.5 532 29.9
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 1.3e-24 118.6 259 35.5
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 4.3e-23 113.6 526 30.6
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.3e-22 112.1 566 29.3
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.1e-21 109.0 505 30.7
Oeu051588.1 Olea europaea HOM05D054970 ORTHO05D049444 2.5e-18 97.8 228 36.0
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 1.1e-15 89.0 538 27.7
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 4.3e-15 87.0 282 30.9
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 3.4e-12 77.4 275 29.5
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 2.9e-11 74.3 290 30.0
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 6.5e-11 73.2 388 26.3


User provided reference genes

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