Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 1.2e-177 626.3 307 100.0
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 3.6e-153 545.0 309 84.1
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 6.1e-153 544.3 309 84.5
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 1.0e-152 543.5 307 82.4
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 2.2e-150 535.8 309 82.2
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 2.2e-147 525.8 302 80.5
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 2.1e-145 519.2 299 80.6
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 2.7e-145 518.8 299 80.3
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 4.7e-145 518.1 299 79.9
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 2.3e-144 515.8 298 78.9
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 5.2e-144 514.6 300 79.3
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 2.0e-143 512.7 305 79.0
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 9.8e-143 510.4 297 79.8
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 1.3e-142 510.0 305 78.7
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 9.2e-141 503.8 302 75.8
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 2.0e-140 502.7 294 77.9
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 2.3e-139 499.2 308 75.3
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 2.9e-139 498.8 305 76.4
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 5.0e-139 498.0 307 75.6
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 2.5e-138 495.7 300 74.3
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 3.3e-138 495.4 300 74.7
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 9.5e-138 493.8 301 75.7
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 1.2e-137 493.4 302 75.8
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 2.8e-137 492.3 302 74.5
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 1.4e-136 490.0 301 74.1
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 1.8e-136 489.6 299 74.2
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 1.8e-136 489.6 299 74.6
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 2.3e-136 489.2 300 73.7
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 8.9e-136 487.3 303 74.3
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 8.9e-136 487.3 300 76.3
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 8.9e-136 487.3 300 74.0
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 8.9e-136 487.3 300 73.3
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 1.2e-135 486.9 302 74.2
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 1.5e-135 486.5 301 72.4
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 2.0e-135 486.1 298 73.8
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 2.0e-135 486.1 302 73.8
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 5.7e-135 484.6 300 72.3
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 1.3e-134 483.4 304 72.4
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 1.7e-134 483.0 299 73.6
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.7e-134 483.0 299 74.2
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 2.2e-134 482.6 300 72.3
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 2.2e-134 482.6 300 72.7
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 2.2e-134 482.6 304 72.4
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 3.7e-134 481.9 302 72.2
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 3.7e-134 481.9 300 71.3
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 1.1e-133 480.3 296 74.0
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 1.4e-133 479.9 300 73.3
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 1.8e-133 479.6 305 73.4
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 1.8e-133 479.6 304 72.0
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 2.4e-133 479.2 302 71.9
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 5.4e-133 478.0 298 73.5
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 9.2e-133 477.2 299 71.9
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 1.2e-132 476.9 299 73.2
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 1.6e-132 476.5 293 75.1
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 1.6e-132 476.5 301 73.4
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 2.0e-132 476.1 299 71.9
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 2.7e-132 475.7 302 71.5
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 7.8e-132 474.2 302 72.2
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 1.3e-131 473.4 302 72.2
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 1.7e-131 473.0 295 73.2
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 6.6e-131 471.1 301 71.4
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 1.1e-130 470.3 300 69.3
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 2.5e-130 469.2 299 70.9
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 2.5e-130 469.2 304 71.7
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 7.3e-130 467.6 302 71.5
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 1.2e-129 466.8 301 70.8
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 3.6e-129 465.3 304 70.1
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 3.6e-129 465.3 309 70.2
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 6.2e-129 464.5 306 69.9
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 2.3e-128 462.6 302 70.2
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 4.0e-128 461.8 295 70.8
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 6.8e-128 461.1 306 69.9
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 8.9e-128 460.7 306 69.3
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 1.2e-127 460.3 302 69.5
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 2.6e-127 459.1 306 69.3
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 2.6e-127 459.1 298 70.5
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 2.6e-127 459.1 311 69.1
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 3.4e-127 458.8 374 60.4
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 4.4e-127 458.4 306 69.3
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 5.8e-127 458.0 297 70.4
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 1.7e-126 456.4 307 69.4
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 2.2e-126 456.1 306 69.0
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 2.2e-126 456.1 370 61.4
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 2.9e-126 455.7 306 69.0
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 2.9e-126 455.7 299 69.9
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 3.7e-126 455.3 306 69.3
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 3.7e-126 455.3 310 68.1
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 1.1e-125 453.8 306 68.3
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 1.4e-125 453.4 297 71.7
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 7.0e-125 451.1 306 68.0
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 9.2e-125 450.7 306 68.6
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.7e-123 446.4 302 66.6
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 5.0e-123 444.9 302 69.2
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 6.6e-123 444.5 302 68.9
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 1.2e-121 440.3 306 65.4
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 2.1e-121 439.5 314 65.9
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 8.1e-121 437.6 339 62.2
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 6.8e-120 434.5 326 62.0
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 8.9e-120 434.1 304 66.8
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 3.7e-118 428.7 312 65.7
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 7.1e-117 424.5 304 66.8
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 1.7e-115 419.9 264 73.9
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 3.6e-113 412.1 302 63.9
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 5.2e-112 408.3 266 71.1
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 5.2e-112 408.3 271 69.4
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 1.3e-110 403.7 300 65.3
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 2.9e-110 402.5 256 70.3
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 3.6e-105 385.6 305 61.3
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 1.6e-97 360.1 303 54.1
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 2.8e-97 359.4 234 69.7
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 4.0e-96 355.5 268 66.8
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 2.6e-95 352.8 305 58.4
RcHm_v2.0_Chr1g0327431 Rosa chinensis HOM05D005736 ORTHO05D007215 1.5e-87 327.0 198 76.8
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 2.6e-87 326.2 291 53.3
Os07g0414800 Oryza sativa ssp. japonica HOM05D005736 ORTHO05D007215 9.9e-87 324.3 213 68.1
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 8.4e-86 321.2 298 50.0
Nitab4.5_0018629g0010 Nicotiana tabacum HOM05D005736 ORTHO05D007215 1.6e-84 317.0 174 84.5
Sopen09g027740 Solanum pennellii HOM05D005736 ORTHO05D007215 8.7e-83 311.2 174 82.8
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 1.2e-79 300.8 210 64.8
Lj5A420T26 Lonicera japonica HOM05D005736 ORTHO05D007215 4.5e-71 272.3 176 75.6
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 1.8e-64 250.4 236 47.9
RcHm_v2.0_Chr1g0322221 Rosa chinensis HOM05D005736 ORTHO05D007215 5.3e-64 248.8 186 67.2
RcHm_v2.0_Chr3g0465741 Rosa chinensis HOM05D005736 ORTHO05D007215 7.9e-60 235.0 143 75.5
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 6.1e-52 208.8 185 51.9
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 1.1e-50 204.5 174 56.3
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 2.6e-47 193.4 131 66.4
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 2.9e-46 189.9 129 67.4
Actinidia16814 Actinidia chinensis HOM05D005736 ORTHO05D007215 9.4e-45 184.9 104 84.6
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 2.3e-43 180.3 130 65.4
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 1.3e-41 174.5 126 61.9
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 8.2e-41 171.8 101 77.2
MBI18_g44147_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 1.1e-37 161.4 105 69.5
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 3.1e-32 143.3 102 63.7
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 9.1e-32 141.7 105 60.0
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.6e-31 141.0 102 63.7
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 4.1e-24 116.3 77 66.2
MBI18_g08111_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 4.4e-18 96.3 52 78.8
EL10Ac5g11505 Beta vulgaris HOM05D005736 ORTHO05D026989 3.9e-06 56.6 32 81.2


User provided reference genes

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