Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 2.0e-74 282.3 140 100.0
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 4.9e-17 91.7 124 47.6
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 8.4e-17 90.9 175 36.6
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 6.7e-14 81.3 84 54.8
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 8.7e-14 80.9 174 34.5
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 1.5e-13 80.1 55 65.5
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 2.5e-13 79.3 55 63.6
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 5.7e-13 78.2 213 28.2
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 1.3e-12 77.0 54 63.0
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.6e-12 76.6 135 36.3
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 2.1e-12 76.3 54 64.8
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 8.2e-12 74.3 94 46.8
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.1e-11 73.9 87 44.8
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-11 73.9 55 61.8
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.4e-11 73.6 55 60.0
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 3.1e-11 72.4 173 30.6
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 3.1e-11 72.4 82 48.8
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 3.1e-11 72.4 55 58.2
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 4.1e-11 72.0 62 58.1
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 4.1e-11 72.0 53 62.3
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 9.0e-11 70.9 55 54.5
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 9.0e-11 70.9 172 30.8
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 1.5e-10 70.1 215 29.3
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.5e-10 70.1 172 29.1
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.0e-10 69.7 62 51.6
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 2.0e-10 69.7 172 29.1
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.6e-10 69.3 63 52.4
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.6e-10 69.3 63 52.4
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 3.4e-10 68.9 174 29.9
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 4.5e-10 68.6 53 58.5
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 4.5e-10 68.6 53 58.5
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 4.5e-10 68.6 53 58.5
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 5.9e-10 68.2 174 31.0
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.0e-09 67.4 53 56.6
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 1.3e-09 67.0 53 54.7
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.7e-09 66.6 53 54.7
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 1.7e-09 66.6 57 49.1
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 2.2e-09 66.2 53 52.8
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 2.2e-09 66.2 174 29.3
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 2.2e-09 66.2 53 54.7
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 2.9e-09 65.9 53 50.9
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.9e-09 65.9 55 52.7
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 3.8e-09 65.5 199 28.1
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 3.8e-09 65.5 53 54.7
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 3.8e-09 65.5 84 42.9
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 5.0e-09 65.1 174 28.7
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 5.0e-09 65.1 53 54.7
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 6.5e-09 64.7 53 50.9
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 6.5e-09 64.7 53 50.9
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 6.5e-09 64.7 53 54.7
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 6.5e-09 64.7 53 50.9
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 6.5e-09 64.7 53 52.8
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 6.5e-09 64.7 53 52.8
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 8.5e-09 64.3 53 50.9
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 8.5e-09 64.3 56 51.8
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 8.5e-09 64.3 53 50.9
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 8.5e-09 64.3 53 50.9
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 1.1e-08 63.9 87 41.4
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 1.1e-08 63.9 91 38.5
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.4e-08 63.5 55 54.5
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 1.4e-08 63.5 53 47.2
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 1.9e-08 63.2 98 35.7
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 1.9e-08 63.2 174 28.2
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 1.9e-08 63.2 174 28.2
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.9e-08 63.2 53 56.6
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.9e-08 63.2 53 49.1
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 1.9e-08 63.2 75 46.7
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 1.9e-08 63.2 53 49.1
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 1.9e-08 63.2 53 49.1
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.9e-08 63.2 53 47.2
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 1.9e-08 63.2 54 51.9
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.9e-08 63.2 61 49.2
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.9e-08 63.2 55 50.9
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.9e-08 63.2 69 44.9
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 2.5e-08 62.8 53 49.1
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.5e-08 62.8 53 49.1
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.5e-08 62.8 53 49.1
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.5e-08 62.8 53 49.1
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 2.5e-08 62.8 53 47.2
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.5e-08 62.8 53 54.7
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 2.5e-08 62.8 53 54.7
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 3.2e-08 62.4 174 27.6
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 3.2e-08 62.4 174 27.6
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 3.2e-08 62.4 53 45.3
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 3.2e-08 62.4 93 36.6
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 3.2e-08 62.4 53 49.1
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 4.2e-08 62.0 208 26.9
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 4.2e-08 62.0 212 25.9
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 4.2e-08 62.0 66 42.4
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.5e-08 61.6 55 43.6
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 5.5e-08 61.6 53 45.3
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 5.5e-08 61.6 79 39.2
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 5.5e-08 61.6 53 47.2
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 7.2e-08 61.2 53 45.3
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.2e-08 61.2 53 49.1
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 7.2e-08 61.2 66 42.4
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 9.3e-08 60.8 87 37.9
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 9.3e-08 60.8 57 45.6
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 1.2e-07 60.5 55 41.8
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 1.2e-07 60.5 53 50.9
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 1.2e-07 60.5 53 45.3
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.2e-07 60.5 53 45.3
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.2e-07 60.5 53 45.3
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.2e-07 60.5 53 45.3
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.2e-07 60.5 53 45.3
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.2e-07 60.5 181 27.6
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.2e-07 60.5 53 50.9
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 1.6e-07 60.1 63 47.6
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 1.6e-07 60.1 64 42.2
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 2.1e-07 59.7 53 47.2
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 2.1e-07 59.7 55 45.5
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 2.7e-07 59.3 53 43.4
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 3.6e-07 58.9 51 49.0
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 4.6e-07 58.5 78 37.2
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 6.1e-07 58.2 53 47.2
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 6.1e-07 58.2 53 49.1
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 6.1e-07 58.2 71 38.0
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 7.9e-07 57.8 63 41.3
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 7.9e-07 57.8 174 25.9
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 7.9e-07 57.8 174 26.4
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 1.0e-06 57.4 177 25.4
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 1.0e-06 57.4 53 49.1
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-06 56.6 53 41.5
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.8e-06 56.6 55 45.5
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 1.8e-06 56.6 205 23.9
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 2.3e-06 56.2 54 50.0
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 2.3e-06 56.2 63 46.0
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 3.9e-06 55.5 55 40.0
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 6.7e-06 54.7 84 38.1


User provided reference genes

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