Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40944 Striga asiatica HOM05D005346 ORTHO05D007051 8.5e-123 443.7 233 100.0
Migut.E01045 Erythranthe guttata HOM05D005346 ORTHO05D007051 6.6e-75 284.6 230 67.8
unitig_749.g13414 Utricularia gibba HOM05D005346 ORTHO05D007051 5.8e-71 271.6 230 62.2
MSTRG.12059 Avicennia marina HOM05D005346 ORTHO05D007051 7.6e-71 271.2 232 64.7
MSTRG.25547 Avicennia marina HOM05D005346 ORTHO05D007051 1.3e-65 253.8 232 61.6
Oeu016508.1 Olea europaea HOM05D005346 ORTHO05D007051 5.8e-63 245.0 229 60.3
SGA_v2.0_scaffold120G32813 Striga asiatica HOM05D002260 ORTHO05D000476 7.9e-60 234.6 194 64.9
SalBow1G0489 Salvia bowleyana HOM05D005346 ORTHO05D007051 2.8e-57 226.1 178 68.5
SGA_v2.0_scaffold146G36182 Striga asiatica HOM05D005346 ORTHO05D007051 4.9e-54 215.3 205 60.0
CAN.G630.80 Capsicum annuum HOM05D005346 ORTHO05D007051 1.2e-52 210.7 225 52.9
Sopen08g027860 Solanum pennellii HOM05D005346 ORTHO05D007051 3.5e-52 209.1 194 57.7
Solyc08g079490.4 Solanum lycopersicum HOM05D005346 ORTHO05D007051 4.6e-52 208.8 194 57.7
SalBow6G4970 Salvia bowleyana HOM05D005346 ORTHO05D007051 6.0e-52 208.4 299 46.2
Peaxi162Scf00271g00130 Petunia axillaris HOM05D005346 ORTHO05D007051 1.3e-51 207.2 190 58.4
CSS0033087 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 1.8e-51 206.8 186 60.8
Dinv39076 Davidia involucrata HOM05D005346 ORTHO05D007051 5.1e-51 205.3 188 59.6
PGSC0003DMG400003934 Solanum tuberosum HOM05D005346 ORTHO05D007051 1.1e-50 204.1 233 50.6
Cc08_g13250 Coffea canephora HOM05D005346 ORTHO05D007051 1.9e-50 203.4 236 53.0
CSS0010264 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 7.4e-50 201.4 193 57.5
CSS0047104 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 9.6e-50 201.1 193 57.5
Actinidia02088 Actinidia chinensis HOM05D005346 ORTHO05D007051 2.1e-49 199.9 190 56.3
Nitab4.5_0012948g0030 Nicotiana tabacum HOM05D005346 ORTHO05D007051 3.7e-49 199.1 199 55.3
Cpa.g.sc29.89 Carica papaya HOM05D005346 ORTHO05D007051 1.4e-48 197.2 194 56.2
DCAR_006800 Daucus carota HOM05D005346 ORTHO05D007051 5.3e-48 195.3 188 55.9
Nn4g26377 Nelumbo nucifera HOM05D005346 ORTHO05D007051 5.3e-48 195.3 192 57.8
GSVIVG01004909001 Vitis vinifera HOM05D005346 ORTHO05D007051 5.3e-48 195.3 192 57.8
Haze_09052 Corylus avellana HOM05D005346 ORTHO05D007051 9.0e-48 194.5 218 52.3
Lsat_1_v5_gn_6_9800 Lactuca sativa HOM05D005346 ORTHO05D007051 1.2e-47 194.1 232 49.6
Cfa012017 Carpinus fangiana HOM05D005346 ORTHO05D007051 2.0e-47 193.4 233 50.2
Potri.003G115300 Populus trichocarpa HOM05D005346 ORTHO05D007051 3.4e-47 192.6 192 57.3
Rhsim07G0101400 Rhododendron simsii HOM05D005346 ORTHO05D007051 3.4e-47 192.6 191 57.6
Sc22g0000580 Simmondsia chinensis HOM05D005346 ORTHO05D007051 3.4e-47 192.6 225 52.0
MBI12_g34008_MAGBIO Magnolia biondii HOM05D005346 ORTHO05D007051 4.5e-47 192.2 190 57.4
vmacro14041 Vaccinium macrocarpon HOM05D005346 ORTHO05D007051 5.8e-47 191.8 169 60.9
AUR62017389 Chenopodium quinoa HOM05D005346 ORTHO05D007051 7.6e-47 191.4 242 51.7
TAR629G0356 Trochodendron aralioides HOM05D005346 ORTHO05D007051 1.7e-46 190.3 229 50.7
Atru.chr9.1434 Acer truncatum HOM05D005346 ORTHO05D007051 2.2e-46 189.9 189 57.1
Duzib084G0498 Durio zibethinus HOM05D005346 ORTHO05D007051 2.2e-46 189.9 192 55.7
AUR62010513 Chenopodium quinoa HOM05D005346 ORTHO05D007051 3.8e-46 189.1 232 48.7
Hma1.2p1_0138F.1_g063170 Hydrangea macrophylla HOM05D005346 ORTHO05D007051 6.5e-46 188.3 190 55.8
Eucgr.E00475 Eucalyptus grandis HOM05D005346 ORTHO05D007051 1.1e-45 187.6 192 56.2
Manes.01G073500 Manihot esculenta HOM05D005346 ORTHO05D007051 4.2e-45 185.7 192 55.2
Lalb_Chr05g0225391 Lupinus albus HOM05D005346 ORTHO05D007051 7.1e-45 184.9 199 53.8
EL10Ac5g12617 Beta vulgaris HOM05D005346 ORTHO05D007051 9.3e-45 184.5 193 56.0
THA.LOC104809446 Tarenaya hassleriana HOM05D005346 ORTHO05D007051 9.3e-45 184.5 194 54.1
A09p15920 Brassica napus HOM05D005346 ORTHO05D007051 1.6e-44 183.7 183 54.1
BraA09t37228Z Brassica rapa HOM05D005346 ORTHO05D007051 1.6e-44 183.7 183 54.1
CiPaw.12G104700 Carya illinoinensis HOM05D005346 ORTHO05D007051 1.6e-44 183.7 192 55.2
QL05p030033 Quercus lobata HOM05D005346 ORTHO05D007051 1.6e-44 183.7 193 54.9
QL12p015018 Quercus lobata HOM05D005346 ORTHO05D007051 1.6e-44 183.7 193 54.9
BcaC04g22452 Brassica carinata HOM05D005346 ORTHO05D007051 2.7e-44 183.0 235 47.2
BolC9t54826H Brassica oleracea HOM05D005346 ORTHO05D007051 2.7e-44 183.0 183 54.1
HanXRQChr17g0549091 Helianthus annuus HOM05D005346 ORTHO05D007051 2.7e-44 183.0 194 53.6
Sabra03G0079900 Salix brachista HOM05D005346 ORTHO05D007051 2.7e-44 183.0 175 58.3
C09p19170 Brassica napus HOM05D005346 ORTHO05D007051 4.6e-44 182.2 235 47.2
Gohir.A03G011800 Gossypium hirsutum HOM05D005346 ORTHO05D007051 4.6e-44 182.2 192 53.1
Psat4g068640 Pisum sativum HOM05D005346 ORTHO05D007051 4.6e-44 182.2 189 56.6
Ciclev10021953m.g Citrus clementina HOM05D005346 ORTHO05D007051 6.0e-44 181.8 184 55.4
Gorai.003G166600 Gossypium raimondii HOM05D005346 ORTHO05D007051 6.0e-44 181.8 192 53.6
TWI60G0731 Tripterygium wilfordii HOM05D005346 ORTHO05D007051 6.0e-44 181.8 188 53.7
Medtr4g102230 Medicago truncatula HOM05D005346 ORTHO05D007051 1.0e-43 181.0 228 50.0
PGR042G0462 Punica granatum HOM05D005346 ORTHO05D007051 1.0e-43 181.0 186 55.4
RcHm_v2.0_Chr7g0201521 Rosa chinensis HOM05D005346 ORTHO05D007051 1.0e-43 181.0 187 54.0
arahy.Tifrunner.gnm1.ann1.FP1HKG Arachis hypogaea HOM05D005346 ORTHO05D007051 1.3e-43 180.6 189 54.5
Lj4g0017997 Lotus japonicus HOM05D005346 ORTHO05D007051 1.3e-43 180.6 197 53.3
MD04G1079400 Malus domestica HOM05D005346 ORTHO05D007051 1.3e-43 180.6 232 49.6
PSO478G1917 Papaver somniferum HOM05D005346 ORTHO05D007051 1.3e-43 180.6 207 48.8
TAR629G0085 Trochodendron aralioides HOM05D005346 ORTHO05D007051 1.3e-43 180.6 201 53.2
PSO782G1275 Papaver somniferum HOM05D005346 ORTHO05D007051 1.8e-43 180.3 207 48.3
Hund28689 Selenicereus undatus HOM05D005346 ORTHO05D007051 1.8e-43 180.3 231 47.6
Hund28691 Selenicereus undatus HOM05D005346 ORTHO05D007051 1.8e-43 180.3 231 47.6
HPP92_003521 Vanilla planifolia HOM05D005346 ORTHO05D007051 2.3e-43 179.9 190 52.6
FAN04G2793 Fragaria x ananassa HOM05D000062 ORTHO05D007051 5.1e-43 178.7 186 53.8
MELO3C013984.2 Cucumis melo HOM05D005346 ORTHO05D007051 6.7e-43 178.3 192 53.1
CANSAT21G2498 Cannabis sativa HOM05D005346 ORTHO05D007051 8.7e-43 177.9 192 54.2
FvH4_5g00690 Fragaria vesca HOM05D005346 ORTHO05D007051 8.7e-43 177.9 186 53.2
Prupe.5G079700 Prunus persica HOM05D005346 ORTHO05D007051 8.7e-43 177.9 188 54.3
Sabra01G0090200 Salix brachista HOM05D005346 ORTHO05D007051 8.7e-43 177.9 175 59.4
CDE11G0613 Ceratophyllum demersum HOM05D005346 ORTHO05D007051 1.1e-42 177.6 191 53.9
Potri.001G117500 Populus trichocarpa HOM05D005346 ORTHO05D007051 1.1e-42 177.6 192 53.6
BcaB07g31363 Brassica carinata HOM05D005346 ORTHO05D007051 1.5e-42 177.2 185 53.5
Carub.0002s0213 Capsella rubella HOM05D005346 ORTHO05D007051 1.5e-42 177.2 190 51.6
Glyma.17G135200 Glycine max HOM05D005346 ORTHO05D007051 1.9e-42 176.8 189 54.0
ATR0579G161 Amborella trichopoda HOM05D005346 ORTHO05D007051 2.5e-42 176.4 226 49.6
FAN13G0616 Fragaria x ananassa HOM05D005346 ORTHO05D007051 7.4e-42 174.9 186 52.2
AT1G62850 Arabidopsis thaliana HOM05D005346 ORTHO05D007051 9.7e-42 174.5 193 50.8
CsaV3_3G003190 Cucumis sativus L. HOM05D005346 ORTHO05D007051 9.7e-42 174.5 223 46.6
Zm00001eb010680 Zea mays HOM05D005346 ORTHO05D007051 9.7e-42 174.5 187 53.5
Thhalv10023661m.g Eutrema salsugineum HOM05D005346 ORTHO05D007051 1.3e-41 174.1 186 53.8
AL2G12910 Arabidopsis lyrata HOM05D005346 ORTHO05D007051 2.2e-41 173.3 190 50.5
Phvul.003G215000 Phaseolus vulgaris HOM05D005346 ORTHO05D007051 2.8e-41 172.9 188 53.2
Aa31LG2G370 Aethionema arabicum HOM05D005346 ORTHO05D007051 6.3e-41 171.8 189 51.3
COL.COLO4_23877 Corchorus olitorius HOM05D005346 ORTHO05D007051 6.3e-41 171.8 210 48.6
VMungo1215G1290 Vigna mungo HOM05D005346 ORTHO05D007051 6.3e-41 171.8 188 53.2
CARHR048890 Cardamine hirsuta HOM05D005346 ORTHO05D007051 1.8e-40 170.2 190 50.0
Thecc.03G262000 Theobroma cacao HOM05D005346 ORTHO05D007051 2.4e-40 169.9 138 63.0
Glyma.05G052900 Glycine max HOM05D005346 ORTHO05D007051 4.1e-40 169.1 161 59.6
Ca_12281_v3 Cicer arietinum L. HOM05D002260 ORTHO05D007051 9.0e-40 167.9 168 57.7
Aqoxy7G00648 Aquilegia oxysepala HOM05D005346 ORTHO05D007051 1.2e-39 167.5 182 51.6
ECA233G1833 Erigeron canadensis HOM05D005346 ORTHO05D007051 2.0e-39 166.8 194 51.0
Sed0008355 Sechium edule HOM05D005346 ORTHO05D007051 2.6e-39 166.4 221 46.2
Lj8A255T54 Lonicera japonica HOM05D005346 ORTHO05D007051 4.5e-39 165.6 249 43.4
Migut.E01266 Erythranthe guttata HOM05D005346 ORTHO05D007051 1.0e-38 164.5 139 65.5
Sp2g01760 Schrenkiella parvula HOM05D005346 ORTHO05D007051 1.0e-38 164.5 185 50.3
SEGI_23485 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 2.5e-37 159.8 170 54.1
Os03g0249200 Oryza sativa ssp. japonica HOM05D005346 ORTHO05D007051 3.2e-37 159.5 155 56.1
TPR.G37664 Trifolium pratense HOM05D005346 ORTHO05D007051 2.1e-36 156.8 172 52.3
Pp3c9_5680 Physcomitrium patens HOM05D005346 ORTHO05D007051 1.3e-35 154.1 183 47.5
ClCG10G003160 Citrullus lanatus HOM05D005346 ORTHO05D007051 4.5e-31 139.0 248 40.7
Mapoly0185s0016 Marchantia polymorpha HOM05D005346 ORTHO05D007051 5.5e-29 132.1 146 50.7
SEGI_25852 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 2.1e-28 130.2 132 56.1
Nitab4.5_0001816g0160 Nicotiana tabacum HOM05D005346 ORTHO05D020323 3.0e-27 126.3 195 45.1
CBR_g59652 Chara braunii HOM05D005346 ORTHO05D007051 1.5e-26 124.0 148 46.6
Sopen08g003450 Solanum pennellii HOM05D005346 ORTHO05D020323 4.4e-26 122.5 228 40.4
Peaxi162Scf00102g01240 Petunia axillaris HOM05D005346 ORTHO05D020323 5.7e-26 122.1 212 40.6
Nitab4.5_0001265g0030 Nicotiana tabacum HOM05D005346 ORTHO05D020323 7.4e-26 121.7 241 40.2
Solyc08g007490.3 Solanum lycopersicum HOM05D005346 ORTHO05D020323 7.4e-26 121.7 228 39.9
arahy.Tifrunner.gnm1.ann1.IL3HUZ Arachis hypogaea HOM05D005346 ORTHO05D007051 7.7e-23 111.7 255 35.3
Gohir.D03G158100 Gossypium hirsutum HOM05D005346 ORTHO05D007051 7.7e-23 111.7 192 38.0
Gorai.005G179200 Gossypium raimondii HOM05D005346 ORTHO05D007051 9.4e-21 104.8 101 53.5
Gorai.011G192800 Gossypium raimondii HOM05D005346 ORTHO05D007051 1.0e-19 101.3 101 51.5
PRCOL_00004903 Prasinoderma coloniale HOM05D005346 ORTHO05D007051 1.0e-19 101.3 148 42.6
Gohir.D06G129850 Gossypium hirsutum HOM05D005346 ORTHO05D007051 3.9e-19 99.4 101 50.5
Gorai.002G177500 Gossypium raimondii HOM05D005346 ORTHO05D007051 5.2e-19 99.0 97 51.5
MCO12G072 Micromonas commoda HOM05D005346 ORTHO05D007051 6.7e-19 98.6 125 45.6
Cre02.g101800 Chlamydomonas reinhardtii HOM05D005346 ORTHO05D007051 7.4e-18 95.1 166 38.6
AagrBONN_evm.TU.Sc2ySwM_369.472 Anthoceros agrestis HOM05D005346 ORTHO05D007051 1.3e-17 94.4 74 64.9
Migut.H01199 Erythranthe guttata HOM05D005346 ORTHO05D007051 1.8e-16 90.5 96 55.2
Actinidia14465 Actinidia chinensis HOM05D005346 ORTHO05D007051 2.4e-16 90.1 172 34.9
SMO164G0226 Selaginella moellendorffii HOM05D005346 ORTHO05D007051 9.1e-16 88.2 93 49.5
Gohir.D13G182400 Gossypium hirsutum HOM05D005346 ORTHO05D007051 1.0e-14 84.7 76 55.3
CAN.G1394.34 Capsicum annuum HOM05D005346 ORTHO05D020323 1.7e-14 84.0 112 49.1
SEGI_00698 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 2.2e-14 83.6 87 57.5
VMungo1215G3342 Vigna mungo HOM05D005346 ORTHO05D007051 3.2e-13 79.7 100 50.0
SMO353G0412 Selaginella moellendorffii HOM05D000596 ORTHO05D001497 4.0e-11 72.8 169 33.1
Haze_26312 Corylus avellana HOM05D005346 ORTHO05D007051 5.2e-11 72.4 143 32.9
SMO364G0639 Selaginella moellendorffii HOM05D000596 ORTHO05D001497 1.7e-06 57.4 143 31.5
PGSC0003DMG400012509 Solanum tuberosum HOM05D005346 ORTHO05D020323 3.8e-06 56.2 143 34.3


User provided reference genes

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