Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40937 Striga asiatica HOM05D003958 ORTHO05D004864 7.5e-172 607.1 299 100.0
Migut.H00096 Erythranthe guttata HOM05D003958 ORTHO05D004864 2.1e-137 492.7 306 79.7
MSTRG.3157 Avicennia marina HOM05D003958 ORTHO05D004864 1.3e-136 490.0 309 79.3
Oeu057051.1 Olea europaea HOM05D003958 ORTHO05D004864 7.3e-135 484.2 309 77.0
DCAR_009028 Daucus carota HOM05D003958 ORTHO05D004864 3.3e-127 458.8 309 73.5
Lj7A595G65 Lonicera japonica HOM05D003958 ORTHO05D004864 4.0e-125 451.8 313 72.8
CAN.G206.10 Capsicum annuum HOM05D003958 ORTHO05D004864 5.2e-125 451.4 312 74.7
Peaxi162Scf00129g01325 Petunia axillaris HOM05D003958 ORTHO05D004864 6.9e-125 451.1 312 73.1
Cc02_g12190 Coffea canephora HOM05D003958 ORTHO05D004864 1.5e-124 449.9 312 72.4
Duzib147G0735 Durio zibethinus HOM05D003958 ORTHO05D004864 1.5e-124 449.9 311 72.0
Prupe.3G287900 Prunus persica HOM05D003958 ORTHO05D004864 2.6e-124 449.1 311 73.0
CSS0020788 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 7.6e-124 447.6 310 72.3
CSS0020854 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 7.6e-124 447.6 310 72.3
Duzib147G0566 Durio zibethinus HOM05D003958 ORTHO05D004864 9.9e-124 447.2 311 71.7
FvH4_6g51011 Fragaria vesca HOM05D003958 ORTHO05D004864 1.3e-123 446.8 311 72.7
Lju41A38T12 Lonicera japonica HOM05D003958 ORTHO05D004864 1.3e-123 446.8 312 71.8
Nitab4.5_0002739g0040 Nicotiana tabacum HOM05D003958 ORTHO05D004864 1.7e-123 446.4 312 72.4
Sopen02g031390 Solanum pennellii HOM05D003958 ORTHO05D004864 2.9e-123 445.7 312 73.7
CiPaw.04G026700 Carya illinoinensis HOM05D003958 ORTHO05D004864 3.8e-123 445.3 309 72.5
Nitab4.5_0008215g0010 Nicotiana tabacum HOM05D003958 ORTHO05D004864 6.4e-123 444.5 309 72.5
Ciclev10016011m.g Citrus clementina HOM05D003958 ORTHO05D004864 8.4e-123 444.1 310 71.0
PGSC0003DMG400000483 Solanum tuberosum HOM05D003958 ORTHO05D004864 1.1e-122 443.7 312 73.7
RcHm_v2.0_Chr2g0172551 Rosa chinensis HOM05D003958 ORTHO05D004864 1.4e-122 443.4 312 71.8
COL.COLO4_29053 Corchorus olitorius HOM05D003958 ORTHO05D004864 1.9e-122 443.0 309 72.5
Haze_14701 Corylus avellana HOM05D003958 ORTHO05D004864 1.9e-122 443.0 310 72.9
arahy.Tifrunner.gnm1.ann1.CB8F3G Arachis hypogaea HOM05D003958 ORTHO05D004864 2.4e-122 442.6 309 72.5
SGA_v2.0_scaffold34G13865 Striga asiatica HOM05D003958 ORTHO05D004864 2.4e-122 442.6 318 73.9
Cpa.g.sc108.31 Carica papaya HOM05D003958 ORTHO05D004864 4.2e-122 441.8 304 73.0
CANSAT64G0951 Cannabis sativa HOM05D003958 ORTHO05D004864 5.4e-122 441.4 314 71.0
vmacro18265 Vaccinium macrocarpon HOM05D003958 ORTHO05D004864 7.1e-122 441.0 330 68.2
Phvul.011G172200 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 9.3e-122 440.7 310 72.6
PGR054G0003 Punica granatum HOM05D003958 ORTHO05D004864 9.3e-122 440.7 308 71.1
arahy.Tifrunner.gnm1.ann1.38SPRB Arachis hypogaea HOM05D003958 ORTHO05D004864 1.2e-121 440.3 309 71.8
Hund02774 Selenicereus undatus HOM05D003958 ORTHO05D004864 1.6e-121 439.9 310 72.3
Atru.chr6.2341 Acer truncatum HOM05D003958 ORTHO05D004864 2.1e-121 439.5 308 70.8
Medtr6g047800 Medicago truncatula HOM05D003958 ORTHO05D004864 2.7e-121 439.1 308 73.7
PGR119G1149 Punica granatum HOM05D003958 ORTHO05D004864 2.7e-121 439.1 308 71.1
Thecc.04G013700 Theobroma cacao HOM05D003958 ORTHO05D004864 4.6e-121 438.3 311 70.4
Sed0009763 Sechium edule HOM05D003958 ORTHO05D004864 6.0e-121 438.0 309 70.9
CiPaw.03G040700 Carya illinoinensis HOM05D003958 ORTHO05D004864 7.8e-121 437.6 310 71.6
TAR622G1043 Trochodendron aralioides HOM05D003958 ORTHO05D004864 7.8e-121 437.6 312 72.4
ClCG01G008920 Citrullus lanatus HOM05D003958 ORTHO05D004864 1.0e-120 437.2 309 71.2
TPR.G33516 Trifolium pratense HOM05D003958 ORTHO05D004864 1.3e-120 436.8 304 74.0
Lj2g0025561 Lotus japonicus HOM05D003958 ORTHO05D004864 1.7e-120 436.4 308 71.4
Nn7g37719 Nelumbo nucifera HOM05D003958 ORTHO05D004864 1.7e-120 436.4 312 71.5
Manes.17G113700 Manihot esculenta HOM05D003958 ORTHO05D004864 2.3e-120 436.0 310 71.6
Duzib147G0897 Durio zibethinus HOM05D003958 ORTHO05D004864 3.0e-120 435.6 309 71.2
Aqoxy3G00906 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 5.1e-120 434.9 312 71.8
Lj3g0001252 Lotus japonicus HOM05D003958 ORTHO05D004864 8.7e-120 434.1 308 71.8
CsaV3_1G037790 Cucumis sativus L. HOM05D003958 ORTHO05D004864 1.1e-119 433.7 309 70.9
ECA232G3491 Erigeron canadensis HOM05D003958 ORTHO05D004864 1.5e-119 433.3 312 70.2
QL02p075632 Quercus lobata HOM05D003958 ORTHO05D004864 1.9e-119 433.0 310 70.0
Psat1g092800 Pisum sativum HOM05D003958 ORTHO05D004864 2.5e-119 432.6 309 72.8
THA.LOC104821089 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 2.5e-119 432.6 309 69.3
Gohir.D09G027100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.3e-119 432.2 309 70.2
Gohir.D13G007800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.3e-119 432.2 305 69.8
Lalb_Chr03g0031671 Lupinus albus HOM05D003958 ORTHO05D004864 3.3e-119 432.2 308 71.4
Gorai.006G031600 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.3e-119 431.8 309 70.2
MELO3C021808.2 Cucumis melo HOM05D003958 ORTHO05D004864 5.6e-119 431.4 309 70.9
Gohir.A09G027800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 7.3e-119 431.0 309 70.2
Aqoxy2G00425 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 9.6e-119 430.6 312 71.2
Phvul.006G181700 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 1.6e-118 429.9 311 71.1
Ca_00876_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 2.1e-118 429.5 307 73.0
VMungo0540G0822 Vigna mungo HOM05D003958 ORTHO05D004864 2.8e-118 429.1 309 69.9
HanXRQChr09g0255001 Helianthus annuus HOM05D003958 ORTHO05D004864 3.6e-118 428.7 311 68.8
Carub.0006s1277 Capsella rubella HOM05D003958 ORTHO05D004864 4.8e-118 428.3 321 68.2
THA.LOC104802398 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 4.8e-118 428.3 317 70.3
TPR.G11724 Trifolium pratense HOM05D003958 ORTHO05D004864 1.4e-117 426.8 311 69.5
EL10Ac9g21169 Beta vulgaris HOM05D003958 ORTHO05D004864 2.4e-117 426.0 310 70.0
Eucgr.I01766 Eucalyptus grandis HOM05D003958 ORTHO05D004864 3.1e-117 425.6 308 71.1
PSO832G3613 Papaver somniferum HOM05D003958 ORTHO05D004864 3.1e-117 425.6 311 70.4
Ca_00369_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 4.0e-117 425.2 307 70.4
Glyma.13G234900 Glycine max HOM05D003958 ORTHO05D004864 1.5e-116 423.3 312 71.2
MBI05_g22036_MAGBIO Magnolia biondii HOM05D003958 ORTHO05D004864 1.5e-116 423.3 309 69.6
PSO063G1059 Papaver somniferum HOM05D003958 ORTHO05D004864 1.5e-116 423.3 311 70.1
AT5G14600 Arabidopsis thaliana HOM05D003958 ORTHO05D004864 2.6e-116 422.5 321 67.0
TWI12G0059 Tripterygium wilfordii HOM05D003958 ORTHO05D004864 2.6e-116 422.5 312 68.9
Lsat_1_v5_gn_4_183181 Lactuca sativa HOM05D003958 ORTHO05D004864 5.8e-116 421.4 318 68.6
CARHR198720 Cardamine hirsuta HOM05D003958 ORTHO05D004864 7.6e-116 421.0 319 66.8
Psat1g202680 Pisum sativum HOM05D003958 ORTHO05D004864 7.6e-116 421.0 310 69.0
Aa31LG11G15350 Aethionema arabicum HOM05D003958 ORTHO05D004864 9.9e-116 420.6 320 68.1
CDE06G0036 Ceratophyllum demersum HOM05D003958 ORTHO05D004864 9.9e-116 420.6 308 69.8
AUR62002487 Chenopodium quinoa HOM05D003958 ORTHO05D004864 1.7e-115 419.9 330 66.1
Glyma.15G078000 Glycine max HOM05D003958 ORTHO05D004864 2.9e-115 419.1 311 69.8
AL6G25360 Arabidopsis lyrata HOM05D003958 ORTHO05D004864 6.4e-115 417.9 321 66.7
Sabra18G0099100 Salix brachista HOM05D003958 ORTHO05D004864 6.4e-115 417.9 310 68.1
C09p62510 Brassica napus HOM05D003958 ORTHO05D004864 2.4e-114 416.0 319 66.5
Potri.018G120500 Populus trichocarpa HOM05D003958 ORTHO05D004864 4.2e-114 415.2 310 68.4
Sabra18G0100500 Salix brachista HOM05D003958 ORTHO05D004864 9.3e-114 414.1 310 67.4
Sabra18G0098500 Salix brachista HOM05D003958 ORTHO05D004864 1.2e-113 413.7 309 67.3
Thhalv10014133m.g Eutrema salsugineum HOM05D003958 ORTHO05D004864 6.0e-113 411.4 318 66.4
BraA10t44467Z Brassica rapa HOM05D003958 ORTHO05D004864 7.9e-113 411.0 319 65.2
A10p24040 Brassica napus HOM05D003958 ORTHO05D004864 1.3e-112 410.2 319 65.2
BolC9t59091H Brassica oleracea HOM05D003958 ORTHO05D004864 1.1e-111 407.1 326 64.4
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 1.9e-111 406.4 315 65.7
BcaNung03113 Brassica carinata HOM05D003958 ORTHO05D004864 5.6e-111 404.8 319 64.9
AUR62023705 Chenopodium quinoa HOM05D003958 ORTHO05D004864 2.1e-110 402.9 299 69.6
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 4.8e-110 401.7 253 79.1
Hma1.2p1_0858F.1_g229230 Hydrangea macrophylla HOM05D003958 ORTHO05D004864 1.1e-109 400.6 337 63.5
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 2.4e-109 399.4 284 72.5
ATR0057G029 Amborella trichopoda HOM05D003958 ORTHO05D004864 1.7e-107 393.3 311 66.2
FAN09G1134 Fragaria x ananassa HOM05D003958 ORTHO05D004864 2.9e-107 392.5 283 70.7
MD09G1029500 Malus domestica HOM05D003958 ORTHO05D004864 2.9e-107 392.5 281 70.5
Sc03g0007660 Simmondsia chinensis HOM05D003958 ORTHO05D004864 1.1e-106 390.6 310 66.1
Zm00001eb071120 Zea mays HOM05D003958 ORTHO05D004864 2.1e-105 386.3 321 62.6
Sabra18G0101000 Salix brachista HOM05D003958 ORTHO05D004864 1.5e-103 380.2 280 68.6
SEGI_01237 Sequoiadendron giganteum HOM05D003958 ORTHO05D004864 9.6e-103 377.5 322 61.8
BcaC03g13470 Brassica carinata HOM05D003958 ORTHO05D004864 1.6e-102 376.7 307 61.9
Gorai.013G008200 Gossypium raimondii HOM05D003958 ORTHO05D004864 3.1e-101 372.5 295 63.7
Os04g0319600 Oryza sativa ssp. japonica HOM05D003958 ORTHO05D004864 9.0e-101 370.9 322 60.6
arahy.Tifrunner.gnm1.ann1.8Z0BSJ Arachis hypogaea HOM05D003958 ORTHO05D004864 2.7e-97 359.4 296 63.5
MD17G1031500 Malus domestica HOM05D003958 ORTHO05D004864 3.3e-95 352.4 220 78.6
Sabra18G0098900 Salix brachista HOM05D003958 ORTHO05D004864 5.7e-95 351.7 261 67.4
HPP92_013732 Vanilla planifolia HOM05D003958 ORTHO05D004864 5.3e-93 345.1 227 72.7
Pp3c18_5220 Physcomitrium patens HOM05D003958 ORTHO05D004864 2.6e-92 342.8 334 56.3
CSS0027303 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 8.5e-91 337.8 308 59.7
SMO361G0280 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 2.7e-89 332.8 300 59.0
Medtr2g014590 Medicago truncatula HOM05D003958 ORTHO05D004864 6.1e-89 331.6 231 70.1
SMO361G0823 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 7.9e-89 331.3 300 58.7
Dinv35088 Davidia involucrata HOM05D003958 ORTHO05D004864 5.1e-88 328.6 311 59.5
AagrBONN_evm.TU.Sc2ySwM_344.690 Anthoceros agrestis HOM05D003958 ORTHO05D004864 6.7e-88 328.2 308 56.8
Mapoly0053s0094 Marchantia polymorpha HOM05D003958 ORTHO05D004864 1.9e-87 326.6 337 51.0
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 4.7e-81 305.4 236 64.0
unitig_62.g23558 Utricularia gibba HOM05D003958 ORTHO05D004864 1.1e-79 300.8 205 73.2
arahy.Tifrunner.gnm1.ann1.Z5MU8N Arachis hypogaea HOM05D003958 ORTHO05D004864 2.0e-79 300.1 204 75.0
arahy.Tifrunner.gnm1.ann1.M5ZQAR Arachis hypogaea HOM05D003958 ORTHO05D004864 5.3e-77 292.0 226 66.8
MCO10G191 Micromonas commoda HOM05D003958 ORTHO05D004864 3.3e-71 272.7 320 48.8
Cre05.g244236 Chlamydomonas reinhardtii HOM05D003958 ORTHO05D004864 7.4e-71 271.6 249 58.2
Atru.chr6.2249 Acer truncatum HOM05D003958 ORTHO05D004864 5.9e-68 261.9 149 83.9
Ah.07g203270 Amaranthus hybridus HOM05D003958 ORTHO05D004864 2.0e-63 246.9 149 79.2
GSVIVG01032441001 Vitis vinifera HOM05D000462 ORTHO05D002607 5.9e-60 235.3 157 75.2
arahy.Tifrunner.gnm1.ann1.FV4QAS Arachis hypogaea HOM05D003958 ORTHO05D004864 1.7e-59 233.8 171 72.5
PRCOL_00006622 Prasinoderma coloniale HOM05D003958 ORTHO05D004864 2.2e-59 233.4 361 41.0
Gohir.A10G243400 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.8e-56 221.9 134 77.6
Sopen06g018800 Solanum pennellii HOM05D003958 ORTHO05D004864 5.5e-50 202.2 131 78.6
Ah.07g203280 Amaranthus hybridus HOM05D003958 ORTHO05D004864 6.8e-48 195.3 188 56.4
Gohir.A01G232100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.2e-47 194.5 121 74.4
Gohir.D11G349300 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.4e-47 193.0 121 75.2
Gorai.004G293900 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.4e-47 192.6 121 75.2
Gorai.006G274500 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.4e-47 192.6 121 75.2
Gohir.D08G275428 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.7e-46 190.7 121 74.4
Eucgr.L02705 Eucalyptus grandis HOM05D003958 ORTHO05D004864 2.2e-46 190.3 170 61.2
Gohir.A03G000004 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.8e-46 189.9 112 80.4
Gohir.D09G250100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.8e-46 189.9 118 76.3
Gorai.007G380200 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.9e-46 189.1 116 75.9
Haze_26162 Corylus avellana HOM05D003958 ORTHO05D004864 6.3e-46 188.7 289 38.4
Gohir.D01G222101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.1e-45 188.0 118 74.6
Gohir.D03G178200 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.1e-45 186.4 118 73.7
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.2e-44 184.5 118 72.0
BcaC01g04875 Brassica carinata HOM05D003958 ORTHO05D004864 1.1e-42 177.9 231 46.3
Gohir.1Z049515 Gossypium hirsutum HOM05D003958 ORTHO05D015143 3.7e-38 162.9 102 74.5
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.9e-37 160.6 285 38.6
Gorai.006G275300 Gossypium raimondii HOM05D003958 ORTHO05D015143 1.9e-37 160.6 102 71.6
Gohir.A06G000101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 9.2e-37 158.3 87 86.2
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.2e-33 147.9 140 55.0
Gorai.001G000100 Gossypium raimondii HOM05D003958 ORTHO05D004864 3.7e-30 136.3 84 75.0
FAN05G2568 Fragaria x ananassa HOM05D003958 ORTHO05D004864 5.6e-26 122.5 136 50.7
Atru.chr6.2248 Acer truncatum HOM05D003958 ORTHO05D004864 3.1e-24 116.7 99 57.6
C03p32750 Brassica napus HOM05D003958 ORTHO05D004864 1.2e-23 114.8 85 63.5
BolC3t15610H Brassica oleracea HOM05D003958 ORTHO05D004864 1.2e-23 114.8 85 63.5
CSS0019434 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 1.9e-18 97.4 73 69.9
Gohir.D11G176600 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.1e-16 90.1 92 53.3
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 1.5e-15 87.8 94 47.9
Gohir.D07G000766 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.0e-15 87.4 92 52.2
Gorai.013G272500 Gossypium raimondii HOM05D003958 ORTHO05D004864 7.6e-15 85.5 92 52.2
Solyc06g053690.3 Solanum lycopersicum HOM05D003958 ORTHO05D004864 1.3e-14 84.7 62 62.9
FAN05G2311 Fragaria x ananassa HOM05D003958 ORTHO05D004864 3.8e-14 83.2 107 45.8
Gohir.A09G249500 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.1e-13 81.6 64 68.8
Nitab4.5_0001556g0020 Nicotiana tabacum HOM05D003958 ORTHO05D004864 1.6e-12 77.8 81 51.9
Oeu056467.1 Olea europaea HOM05D003958 ORTHO05D004864 1.6e-12 77.8 61 57.4
Gohir.1Z049410 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.6e-12 76.3 64 65.6
Gohir.D08G275100 Gossypium hirsutum HOM05D003958 ORTHO05D005872 8.7e-11 72.0 54 64.8
Gorai.N025700 Gossypium raimondii HOM05D003958 ORTHO05D005872 8.7e-11 72.0 54 64.8
Gohir.1Z049564 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.1e-10 71.6 54 64.8
Gohir.1Z049570 Gossypium hirsutum HOM05D003958 ORTHO05D005872 1.1e-10 71.6 54 64.8
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 1.5e-10 71.2 50 64.0
AL4G39060 Arabidopsis lyrata HOM05D000001 ORTHO05D009069 2.4e-08 63.9 89 44.9


User provided reference genes

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