Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40932 Striga asiatica HOM05D021731 ORTHO05D000002 4.4e-270 934.1 490 100.0
SGA_v2.0_scaffold142G35703 Striga asiatica HOM05D000004 ORTHO05D000002 2.0e-57 227.6 496 39.5
SGA_v2.0_scaffold366G50025 Striga asiatica HOM05D000004 ORTHO05D000002 1.8e-53 214.5 480 36.0
SGA_v2.0_scaffold217G42416 Striga asiatica HOM05D000004 ORTHO05D000002 1.7e-32 144.8 499 31.7
SGA_v2.0_scaffold21G09348 Striga asiatica HOM05D021731 ORTHO05D405590 2.9e-32 144.1 85 83.5
SGA_v2.0_scaffold104G30221 Striga asiatica HOM05D021731 ORTHO05D000002 3.2e-31 140.6 83 81.9
SGA_v2.0_scaffold106G30536 Striga asiatica HOM05D000004 ORTHO05D000002 1.4e-26 125.2 270 35.9
PGR017G0004 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-24 118.2 304 31.6
PGR119G1429 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-23 115.5 218 34.4
SGA_v2.0_scaffold147G36312 Striga asiatica HOM05D000004 ORTHO05D000002 2.5e-23 114.4 199 35.7
SGA_v2.0_scaffold23G10179 Striga asiatica HOM05D021731 ORTHO05D000002 3.6e-22 110.5 77 70.1
SGA_v2.0_scaffold834G53653 Striga asiatica HOM05D000004 ORTHO05D000002 1.4e-21 108.6 111 45.0
SGA_v2.0_scaffold98G29414 Striga asiatica HOM05D012397 ORTHO05D000002 2.3e-21 107.8 181 35.9
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 4.0e-21 107.1 211 34.1
Rhsim08G0252200 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.2e-21 106.7 212 36.3
PGR102G3222 Punica granatum HOM05D000004 ORTHO05D000002 6.8e-21 106.3 211 33.6
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 8.9e-21 105.9 211 34.6
PGR083G1744 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-20 105.1 213 33.8
PSO423G0076 Papaver somniferum HOM05D000004 ORTHO05D000002 3.4e-20 104.0 214 34.6
PSO832G0610 Papaver somniferum HOM05D000004 ORTHO05D000002 3.4e-20 104.0 211 33.2
PSO067G0006 Papaver somniferum HOM05D000004 ORTHO05D000002 5.7e-20 103.2 211 32.7
PSO782G4047 Papaver somniferum HOM05D000004 ORTHO05D000002 5.7e-20 103.2 211 32.7
PSO063G1387 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-19 102.1 215 34.0
PSO017G2500 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-19 100.9 211 33.2
PSO384G1745 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-19 100.9 111 45.9
SabraUnG0000900 Salix brachista HOM05D000004 ORTHO05D000002 2.9e-19 100.9 217 35.9
PSO210G3864 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-19 100.5 214 35.0
PGR031G1659 Punica granatum HOM05D000004 ORTHO05D000002 3.7e-19 100.5 220 31.4
PSO063G7638 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-19 100.1 211 33.6
PSO170G4585 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-19 99.8 215 34.0
Oeu045415.1 Olea europaea HOM05D000004 ORTHO05D000002 3.2e-18 97.4 211 31.3
Sabra19G0098600 Salix brachista HOM05D000004 ORTHO05D000002 4.1e-18 97.1 258 30.2
FvH4_4g08352 Fragaria vesca HOM05D000004 ORTHO05D000002 9.2e-18 95.9 229 33.6
ECA248G0299 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.6e-17 95.1 130 40.0
PSO339G3112 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-17 94.4 211 31.8
Prupe.5G246300 Prunus persica HOM05D000004 ORTHO05D000002 2.7e-17 94.4 214 31.8
Sabra15G0034200 Salix brachista HOM05D000004 ORTHO05D000002 5.9e-17 93.2 254 30.3
Actinidia04586 Actinidia chinensis HOM05D000004 ORTHO05D000002 1.7e-16 91.7 137 39.4
Sp1g29630 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.3e-16 91.3 218 33.0
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 3.0e-16 90.9 191 33.5
Sabra11G0009100 Salix brachista HOM05D000004 ORTHO05D012114 5.0e-16 90.1 184 38.0
ECA240G4601 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-15 88.2 135 35.6
Atru.chr8.552 Acer truncatum HOM05D000004 ORTHO05D000002 2.5e-15 87.8 127 39.4
Thhalv10015409m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 3.3e-15 87.4 211 31.3
Sabra19G0021900 Salix brachista HOM05D000004 ORTHO05D000002 4.3e-15 87.0 212 33.5
Sabra19G0020900 Salix brachista HOM05D000004 ORTHO05D000002 7.3e-15 86.3 207 33.8
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 2.1e-14 84.7 216 30.6
FvH4_3g44612 Fragaria vesca HOM05D000004 ORTHO05D000002 3.6e-14 84.0 155 35.5
PGR031G3219 Punica granatum HOM05D000004 ORTHO05D000002 3.6e-14 84.0 156 34.6
PSO063G0452 Papaver somniferum HOM05D000004 ORTHO05D000002 6.2e-14 83.2 113 39.8
PSO478G0516 Papaver somniferum HOM05D000004 ORTHO05D000002 8.0e-14 82.8 113 39.8
Rhsim06G0029600 Rhododendron simsii HOM05D000004 ORTHO05D000563 8.0e-14 82.8 209 35.4
PSO764G0298 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-13 82.4 219 29.7
PSO063G4042 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-13 81.6 113 38.9
TWI09G0867 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.1e-13 80.9 214 31.3
PSO675G1206 Papaver somniferum HOM05D000004 ORTHO05D000002 4.0e-13 80.5 112 39.3
SGA_v2.0_scaffold64G22084 Striga asiatica HOM05D000324 ORTHO05D000002 4.0e-13 80.5 177 33.3
PSO675G6845 Papaver somniferum HOM05D000004 ORTHO05D000002 5.2e-13 80.1 113 38.9
PSO724G0202 Papaver somniferum HOM05D000004 ORTHO05D000002 5.2e-13 80.1 113 38.1
PSO017G5027 Papaver somniferum HOM05D000004 ORTHO05D000002 6.8e-13 79.7 113 40.7
PSO356G0054 Papaver somniferum HOM05D000004 ORTHO05D000002 6.8e-13 79.7 214 29.0
PSO832G1801 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-12 79.0 113 37.2
PSO161G0062 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-12 78.6 113 38.1
PSO173G0122 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-12 78.2 212 28.8
TWI60G1627 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.4e-12 77.0 114 37.7
ECA246G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.8e-12 76.6 210 25.7
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 9.8e-12 75.9 211 28.4
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 1.3e-11 75.5 211 28.4
SGA_v2.0_scaffold19G08826 Striga asiatica HOM05D000004 ORTHO05D000002 1.7e-11 75.1 213 30.5
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 2.2e-11 74.7 211 28.4
SGA_v2.0_scaffold13G06746 Striga asiatica HOM05D000942 ORTHO05D016434 2.2e-11 74.7 375 33.6
PSO339G1513 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-11 74.3 97 42.3
Thhalv10012229m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 3.7e-11 73.9 252 26.6
HanXRQChr10g0295111 Helianthus annuus HOM05D000004 ORTHO05D000002 3.7e-11 73.9 208 28.8
Hma1.2p1_0502F.1_g167870 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.7e-11 73.9 117 33.3
Hma1.2p1_2119F.1_g314400 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.7e-11 73.9 117 33.3
PSO675G4320 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-11 73.9 211 32.2
TPR.G7152 Trifolium pratense HOM05D000004 ORTHO05D000002 3.7e-11 73.9 111 39.6
Thhalv10017580m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 4.9e-11 73.6 109 40.4
Hma1.2p1_1777F.1_g301980 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.9e-11 73.6 111 36.0
Sabra16G0244800 Salix brachista HOM05D000004 ORTHO05D000002 4.9e-11 73.6 111 31.5
BolC3t20667H Brassica oleracea HOM05D000004 ORTHO05D000563 6.4e-11 73.2 95 42.1
PSO210G5968 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-11 73.2 215 27.9
PSO801G0002 Papaver somniferum HOM05D000004 ORTHO05D000002 8.3e-11 72.8 211 30.3
PSO384G2288 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-10 72.4 212 27.8
PSO781G0180 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-10 72.4 211 30.8
Sabra11G0133300 Salix brachista HOM05D000004 ORTHO05D000002 1.1e-10 72.4 145 30.3
Sabra15G0070300 Salix brachista HOM05D000004 ORTHO05D000002 1.9e-10 71.6 176 28.4
Sabra17G0030900 Salix brachista HOM05D001103 ORTHO05D000002 1.9e-10 71.6 176 28.4
SGA_v2.0_scaffold270G46315 Striga asiatica HOM05D021731 ORTHO05D000002 2.4e-10 71.2 100 42.0
ECA246G4319 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-10 70.9 57 50.9
PSO478G0935 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-10 70.9 93 40.9
PGR004G1008 Punica granatum HOM05D000004 ORTHO05D000002 4.1e-10 70.5 55 56.4
Hma1.2p1_2925F.1_g330460 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.2e-10 69.3 121 29.8
PSO675G3106 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-09 68.6 113 35.4
ECA240G3715 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-09 68.2 81 39.5
PGR134G0003 Punica granatum HOM05D000004 ORTHO05D000002 2.0e-09 68.2 57 52.6
Sabra04G0097800 Salix brachista HOM05D000004 ORTHO05D000002 2.0e-09 68.2 114 31.6
SGA_v2.0_scaffold37G14573 Striga asiatica HOM05D021731 ORTHO05D399531 2.0e-09 68.2 76 48.7
ECA247G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-09 67.8 111 37.8
Hma1.2p1_0683F.1_g202940 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.7e-09 67.8 86 43.0
PSO675G9047 Papaver somniferum HOM05D000004 ORTHO05D000002 3.5e-09 67.4 113 36.3
TAR344G0004 Trochodendron aralioides HOM05D000004 ORTHO05D000002 3.5e-09 67.4 109 30.3
ECA232G0404 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.6e-09 67.0 111 36.0
PGR102G1231 Punica granatum HOM05D000004 ORTHO05D000002 4.6e-09 67.0 57 52.6
Rhsim01G0096600 Rhododendron simsii HOM05D000121 ORTHO05D000002 4.6e-09 67.0 104 34.6
ECA236G1186 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.3e-08 65.5 110 37.3
THA.LOC109116954 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.0e-08 64.3 147 32.7
ECA246G4126 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.9e-08 63.9 110 35.5
HanXRQChr15g0494091 Helianthus annuus HOM05D000004 ORTHO05D000002 5.0e-08 63.5 122 31.1
Dinv07775 Davidia involucrata HOM05D000004 ORTHO05D000002 6.6e-08 63.2 112 32.1
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 6.6e-08 63.2 112 32.1
ECA234G3432 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.6e-08 63.2 125 32.0
PGR031G0090 Punica granatum HOM05D000004 ORTHO05D000002 6.6e-08 63.2 57 47.4
ECA238G2594 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.6e-08 62.8 110 34.5
ECA238G1029 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-07 62.4 123 35.0
ECA246G4073 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-07 62.4 143 30.1
ECA234G3221 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-07 62.0 117 33.3
ClCG02G009860 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.9e-07 61.6 110 29.1
ECA233G5199 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-07 61.6 108 35.2
Potri.003G026106 Populus trichocarpa HOM05D028484 ORTHO05D000002 1.9e-07 61.6 144 30.6
ECA234G0945 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-07 61.2 112 33.9
ECA236G1880 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-07 61.2 111 36.0
Thecc.01G105600 Theobroma cacao HOM05D000004 ORTHO05D000563 2.5e-07 61.2 110 30.0
ECA232G0236 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-07 60.8 111 36.0
ECA247G1511 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-07 60.8 111 35.1
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 3.3e-07 60.8 159 32.1
SEGI_11058 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.3e-07 60.8 117 30.8
PSO170G0021 Papaver somniferum HOM05D000004 ORTHO05D000002 4.3e-07 60.5 210 26.2
ECA246G3393 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.6e-07 60.1 111 35.1
ECA232G1740 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.3e-07 59.7 110 32.7
PSO210G5884 Papaver somniferum HOM05D000004 ORTHO05D000002 7.3e-07 59.7 58 44.8
THA.LOC109117175 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.3e-07 59.7 130 33.1
ECA233G4168 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.5e-07 59.3 105 33.3
ECA246G0636 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.5e-07 59.3 143 29.4
LjContig00141g0019718 Lotus japonicus HOM05D000004 ORTHO05D000002 9.5e-07 59.3 190 30.5
THA.LOC104814125 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.5e-07 59.3 109 35.8
ECA246G4992 Erigeron canadensis HOM05D000006 ORTHO05D014790 1.2e-06 58.9 137 29.9
PSO541G6524 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-06 58.9 49 46.9
PGR004G2180 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-06 58.9 130 31.5
ECA246G1906 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-06 58.5 121 35.5
PSO675G8805 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-06 58.5 114 35.1
PGR083G2860 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-06 58.5 49 53.1
THA.LOC104810159 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.6e-06 58.5 124 29.8
ECA238G3445 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-06 58.2 109 33.9
ECA246G3149 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-06 58.2 127 29.9
THA.LOC104800054 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.1e-06 58.2 109 35.8
SGA_v2.0_scaffold189G40365 Striga asiatica HOM05D008540 ORTHO05D009454 2.8e-06 57.8 121 28.1
THA.LOC104803186 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.8e-06 57.8 123 34.1
FvH4_2g19252 Fragaria vesca HOM05D000004 ORTHO05D000002 3.6e-06 57.4 117 34.2
TPR.G17086 Trifolium pratense HOM05D000004 ORTHO05D000002 3.6e-06 57.4 111 31.5
ECA240G3659 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-06 57.0 112 34.8
ECA246G3946 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-06 57.0 114 34.2
THA.LOC109117145 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.7e-06 57.0 109 34.9
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 4.7e-06 57.0 109 27.5
TWI59G0527 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.2e-06 56.6 55 45.5
ECA246G2687 Erigeron canadensis HOM05D000321 ORTHO05D000002 8.1e-06 56.2 185 29.2


User provided reference genes

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