Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40891 Striga asiatica HOM05D008051 ORTHO05D009905 2.7e-48 195.7 154 100.0
SGA_v2.0_scaffold196G40892 Striga asiatica HOM05D008051 ORTHO05D009905 1.4e-41 173.3 153 92.2
Oeu021430.1 Olea europaea HOM05D008051 ORTHO05D009905 7.1e-25 117.9 115 80.9
Dinv40787 Davidia involucrata HOM05D002089 ORTHO05D002848 6.6e-23 111.3 131 71.0
CAN.G407.107 Capsicum annuum HOM05D008051 ORTHO05D009905 9.6e-22 107.5 111 76.6
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 1.3e-21 107.1 116 75.0
DCAR_009646 Daucus carota HOM05D008051 ORTHO05D009905 8.1e-21 104.4 114 74.6
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 1.4e-20 103.6 114 72.8
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 6.9e-20 101.3 124 69.4
MSTRG.4127 Avicennia marina HOM05D008051 ORTHO05D009905 1.7e-18 96.7 116 75.0
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 2.2e-18 96.3 112 72.3
EL10Ac4g07747 Beta vulgaris HOM05D008051 ORTHO05D009905 4.9e-18 95.1 117 70.1
Migut.N00262 Erythranthe guttata HOM05D008051 ORTHO05D009905 6.4e-18 94.7 107 78.5
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 6.4e-18 94.7 63 57.1
Rhsim06G0068300 Rhododendron simsii HOM05D008051 ORTHO05D009905 2.4e-17 92.8 63 57.1
QL08p007021 Quercus lobata HOM05D008051 ORTHO05D009905 3.2e-17 92.4 117 72.6
Gohir.D01G070000 Gossypium hirsutum HOM05D008051 ORTHO05D009905 7.9e-16 87.8 112 71.4
Gorai.002G092500 Gossypium raimondii HOM05D008051 ORTHO05D009905 7.9e-16 87.8 112 71.4
MBI18_g27147_MAGBIO Magnolia biondii HOM05D008051 ORTHO05D009905 1.0e-15 87.4 123 66.7
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 1.3e-15 87.0 61 62.3
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 1.7e-15 86.7 116 69.8
ATR0752G075 Amborella trichopoda HOM05D008051 ORTHO05D009905 2.3e-15 86.3 118 66.9
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 2.3e-15 86.3 116 69.8
Ciclev10010548m.g Citrus clementina HOM05D008051 ORTHO05D009905 5.1e-15 85.1 67 55.2
Cpa.g.sc12.286 Carica papaya HOM05D008051 ORTHO05D009905 6.6e-15 84.7 72 52.8
TWI39G0594 Tripterygium wilfordii HOM05D008051 ORTHO05D009905 1.1e-14 84.0 111 70.3
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 1.5e-14 83.6 114 68.4
Duzib213G0687 Durio zibethinus HOM05D008051 ORTHO05D009905 1.9e-14 83.2 115 68.7
Gohir.A01G083500 Gossypium hirsutum HOM05D008051 ORTHO05D009905 1.9e-14 83.2 112 70.5
COL.COLO4_09713 Corchorus olitorius HOM05D008051 ORTHO05D009905 2.5e-14 82.8 62 54.8
Cfa012978 Carpinus fangiana HOM05D008051 ORTHO05D009905 3.3e-14 82.4 116 68.1
Glyma.18G093000 Glycine max HOM05D008051 ORTHO05D009905 3.3e-14 82.4 62 56.5
PGR083G0962 Punica granatum HOM05D008051 ORTHO05D009905 7.3e-14 81.3 63 52.4
CiPaw.11G193500 Carya illinoinensis HOM05D008051 ORTHO05D009905 9.6e-14 80.9 118 61.0
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 1.6e-13 80.1 120 66.7
Cfa020295 Carpinus fangiana HOM05D008051 ORTHO05D009905 2.8e-13 79.3 117 67.5
Prupe.4G221300 Prunus persica HOM05D008051 ORTHO05D009905 2.8e-13 79.3 63 52.4
Phvul.006G046600 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 6.2e-13 78.2 49 65.3
Thecc.07G029800 Theobroma cacao HOM05D008051 ORTHO05D009905 1.1e-12 77.4 64 56.2
VMungo0540G2374 Vigna mungo HOM05D008051 ORTHO05D009905 1.8e-12 76.6 65 50.8
Lsat_1_v5_gn_5_3180 Lactuca sativa HOM05D008051 ORTHO05D009905 2.4e-12 76.3 120 66.7
Potri.001G355700 Populus trichocarpa HOM05D008051 ORTHO05D009905 3.1e-12 75.9 111 68.5
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 5.3e-12 75.1 65 49.2
Sabra11G0071300 Salix brachista HOM05D008051 ORTHO05D009905 6.9e-12 74.7 65 49.2
HanXRQChr08g0233561 Helianthus annuus HOM05D008051 ORTHO05D009905 9.0e-12 74.3 115 65.2
MD11G1211300 Malus domestica HOM05D008051 ORTHO05D009905 9.9e-11 70.9 71 49.3
TPR.G33768 Trifolium pratense HOM05D008051 ORTHO05D009905 1.3e-10 70.5 65 52.3
arahy.Tifrunner.gnm1.ann1.QA2XZ5 Arachis hypogaea HOM05D008051 ORTHO05D009905 2.2e-10 69.7 52 59.6
Psat2g012240 Pisum sativum HOM05D008051 ORTHO05D009905 4.9e-10 68.6 47 57.4
Manes.15G067600 Manihot esculenta HOM05D008051 ORTHO05D009905 6.4e-10 68.2 48 52.1
Medtr7g074340 Medicago truncatula HOM05D008051 ORTHO05D009905 6.4e-10 68.2 49 61.2
Medtr7g074350 Medicago truncatula HOM05D008051 ORTHO05D009905 6.4e-10 68.2 49 61.2
Medtr7g074360 Medicago truncatula HOM05D008051 ORTHO05D009905 6.4e-10 68.2 49 61.2
THA.LOC104798770 Tarenaya hassleriana HOM05D012777 ORTHO05D009905 2.4e-09 66.2 116 56.9
Nn7g36860 Nelumbo nucifera HOM05D008051 ORTHO05D009905 3.2e-09 65.9 56 51.8
Lalb_Chr04g0248291 Lupinus albus HOM05D008051 ORTHO05D009905 7.1e-09 64.7 47 61.7
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 1.2e-08 63.9 104 69.2
Glyma.02G292700 Glycine max HOM05D008051 ORTHO05D009905 6.0e-08 61.6 48 58.3
Nn1g07253 Nelumbo nucifera HOM05D008051 ORTHO05D009905 1.0e-07 60.8 56 50.0
Medtr5g063040 Medicago truncatula HOM05D008051 ORTHO05D009905 1.8e-07 60.1 43 58.1
LjContig00272g0004425 Lotus japonicus HOM05D008051 ORTHO05D009905 2.3e-07 59.7 47 53.2
Medtr8g442670 Medicago truncatula HOM05D008051 ORTHO05D009905 2.3e-07 59.7 44 54.5
Lalb_Chr15g0081481 Lupinus albus HOM05D008051 ORTHO05D009905 3.9e-07 58.9 62 43.5
Phvul.008G269500 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 3.9e-07 58.9 49 53.1
Glyma.14G021900 Glycine max HOM05D008051 ORTHO05D009905 5.1e-07 58.5 48 54.2
Lalb_Chr17g0348611 Lupinus albus HOM05D008051 ORTHO05D009905 5.1e-07 58.5 47 55.3
Medtr7g025060 Medicago truncatula HOM05D008051 ORTHO05D009905 8.7e-07 57.8 43 55.8
Cpa.g.sc12.259 Carica papaya HOM05D008051 ORTHO05D009905 1.1e-06 57.4 40 57.5
Medtr5g093340 Medicago truncatula HOM05D008051 ORTHO05D009905 1.9e-06 56.6 43 55.8
TPR.G24073 Trifolium pratense HOM05D008051 ORTHO05D009905 1.9e-06 56.6 43 55.8
Medtr5g093370 Medicago truncatula HOM05D008051 ORTHO05D009905 7.4e-06 54.7 43 53.5


User provided reference genes

Program Settings